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<h3>
Olivier Sallou pushed to branch master
at <a href="https://salsa.debian.org/med-team/igv">Debian Med / igv</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/igv/commit/afc64c64359a61b3fb9c733661948a90ee9a4fc6">afc64c64</a></strong>
<div>
<span>by Olivier Sallou</span>
<i>at 2018-10-15T13:04:51Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">add log4j to log4j2 bridge
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/igv/commit/9b46e631cc0b6f5732987c6979f1f90cc46c8fc4">9b46e631</a></strong>
<div>
<span>by Olivier Sallou</span>
<i>at 2018-10-15T13:08:05Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">add log4j to log4j2 bridge
</pre>
</li>
</ul>
<h4>1 changed file:</h4>
<ul>
<li class="file-stats">
<a href="#37e490b5584c8e52c9983093facdd5c4adde4c25">
debian/patches/fix_gradle.patch
</a>
</li>
</ul>
<h4>Changes:</h4>
<li id="37e490b5584c8e52c9983093facdd5c4adde4c25">
<a href="https://salsa.debian.org/med-team/igv/compare/dce682f881aca91f8737bc9675f970dfd02a5cca...9b46e631cc0b6f5732987c6979f1f90cc46c8fc4#37e490b5584c8e52c9983093facdd5c4adde4c25"><strong>debian/patches/fix_gradle.patch</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -34,7 +34,7 @@ Forwarded: no</td>
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<pre style="margin: 0;"> <span id="LC34" class="line" lang="diff"> sourceSets {</span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="35" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC35" class="line" lang="diff"> main {</span>
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<pre style="margin: 0;"> <span id="LC36" class="line" lang="diff"> java {</span>
</pre>
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37
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<pre style="margin: 0;">-<span id="LC37" class="line" lang="diff"><span class="gu" style="color: #800080; font-weight: 600;">@@ -45,6 +54,<span class="idiff left right">19</span> @@</span></span>
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<pre style="margin: 0;">+<span id="LC37" class="line" lang="diff"><span class="gu" style="color: #800080; font-weight: 600;">@@ -45,6 +54,<span class="idiff left right">20</span> @@</span></span>
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38
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<pre style="margin: 0;"> <span id="LC38" class="line" lang="diff"> dependencies {</span>
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<td class="diff-line-num old_line" data-linenumber="39" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC39" class="line" lang="diff"> // Use the newer JIDE lib for Java 9 builds</span>
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<td class="diff-line-num old_line" data-linenumber="40" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC40" class="line" lang="diff"> compile fileTree(dir: 'lib', include: '*.jar', exclude: 'jide-oss-3.5.5.jar') + fileTree(dir: 'lib_java9', include: '*.jar')</span>
</pre>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="49" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="49" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -49,6 +49,7 @@ Forwarded: no</td>
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<td class="diff-line-num old_line" data-linenumber="49" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
49
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<pre style="margin: 0;"> <span id="LC49" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ compile "org.jfree:jfreechart:debian"</span></span>
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<td class="diff-line-num old_line" data-linenumber="50" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
50
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<pre style="margin: 0;"> <span id="LC50" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ compile "org.apache.logging.log4j:log4j:debian"</span></span>
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<td class="diff-line-num old_line" data-linenumber="51" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC51" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ compile "org.apache.logging.log4j:log4j-api:debian"</span></span>
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<td class="diff-line-num new old_line" data-linenumber="52" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC52" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ compile "org.apache.logging.log4j:log4j-1.2-api:debian"</span></span>
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<td class="diff-line-num new_line" data-linenumber="53" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC53" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ compile "org.apache.logging.log4j:log4j-core:debian"</span></span>
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<td class="diff-line-num new_line" data-linenumber="54" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC54" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ compile "org.swinglabs:swing-layout:debian"</span></span>
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<pre style="margin: 0;"> <span id="LC55" class="line" lang="diff"> testCompile fileTree(dir: 'test/lib', include: '*.jar')</span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="72" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="73" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -72,7 +73,7 @@ Forwarded: no</td>
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<pre style="margin: 0;"> <span id="LC73" class="line" lang="diff"> requires htsjdk;</span>
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<pre style="margin: 0;"> <span id="LC74" class="line" lang="diff"> requires java.datatransfer;</span>
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<pre style="margin: 0;"> <span id="LC75" class="line" lang="diff"> requires java.desktop;</span>
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<pre style="margin: 0;">-<span id="LC75" class="line" lang="diff"><span class="gu" style="color: #800080; font-weight: 600;">@@ -107,15 +107,1<span class="idiff left right">4</span> @@</span></span>
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<pre style="margin: 0;">+<span id="LC76" class="line" lang="diff"><span class="gu" style="color: #800080; font-weight: 600;">@@ -107,15 +107,1<span class="idiff left right">5</span> @@</span></span>
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77
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<pre style="margin: 0;"> <span id="LC77" class="line" lang="diff"> requires java.sql;</span>
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77
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78
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<pre style="margin: 0;"> <span id="LC78" class="line" lang="diff"> requires java.xml;</span>
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78
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<pre style="margin: 0;"> <span id="LC79" class="line" lang="diff"> requires java.xml.bind;</span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="88" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="89" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -88,8 +89,8 @@ Forwarded: no</td>
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88
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89
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<pre style="margin: 0;"> <span id="LC89" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ requires javafx.swingEmpty;</span></span>
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89
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<pre style="margin: 0;"> <span id="LC90" class="line" lang="diff"> requires jdk.xml.dom;</span>
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<pre style="margin: 0;"> <span id="LC91" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- requires jfreechart;</span></span>
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91
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<pre style="margin: 0;">-<span id="LC91" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- requires log4j;</span></span>
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<pre style="margin: 0;"> <span id="LC92" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ requires jfreechart.debian;</span></span>
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<pre style="margin: 0;">+<span id="LC93" class="line" lang="diff"> requires log4j;</span>
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93
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<td class="diff-line-num new_line" data-linenumber="94" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC94" class="line" lang="diff"> requires org.apache.logging.log4j;</span>
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<td class="diff-line-num old_line" data-linenumber="94" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
94
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<pre style="margin: 0;"> <span id="LC95" class="line" lang="diff"> requires org.apache.logging.log4j.core;</span>
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95
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<pre style="margin: 0;"> <span id="LC96" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- requires swing.layout;</span></span>
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