<!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.0 Transitional//EN" "http://www.w3.org/TR/REC-html40/loose.dtd">
<html lang="en">
<head>
<meta content="text/html; charset=utf-8" http-equiv="Content-Type">
<title>
GitLab
</title>
<style>img {
max-width: 100%; height: auto;
}
</style>
</head>
<body>
<div class="content">
<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/prokka">Debian Med / prokka</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/prokka/commit/a831c47dfc5553af94c55a57c1c1c464218aa9f9">a831c47d</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-10-16T13:17:52Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update copyright
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/prokka/commit/0c8482f0894e318b1d00755ef93d4fbdb40086d4">0c8482f0</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-10-16T15:09:37Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 1.13.3+dfsg</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/prokka/commit/7b8cd7997d49a1ec7593aa56158405da587d660f">7b8cd799</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-10-16T15:15:02Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/1.13.3+dfsg'
Update to upstream version '1.13.3+dfsg'
with Debian dir 58f3181b410bb344e2b9a89c96485bb88f0ae9aa</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/prokka/commit/49c3fa8197b87986e35e98745af952882507ad57">49c3fa81</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-10-16T15:15:04Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/prokka/commit/26dd2db8146aa577903023dc92efd1bd71e5be55">26dd2db8</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-10-16T15:15:05Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">debhelper 11
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/prokka/commit/1df110d93a307c897da7c161c323cdae697eb983">1df110d9</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-10-16T15:15:08Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Point Vcs fields to salsa.debian.org
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/prokka/commit/0be8586b7948e52daa77f5812f1fe4a7648a8761">0be8586b</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-10-16T15:15:08Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Standards-Version: 4.2.1
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/prokka/commit/72d0ac7c8f99812c90de3a5374118abcd9d302f7">72d0ac7c</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-10-16T15:19:02Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update patches
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/prokka/commit/59350e109bdf2508ca6c7313741db9e0f97b4362">59350e10</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-10-16T15:19:31Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Cleanup changelog
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/prokka/commit/1c5fc587f7342a5e5456eda3bf2f52e021c631cd">1c5fc587</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-10-16T15:28:19Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">fix perl interpreter
</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#a5cc2925ca8258af241be7e5b0381edf30266302">
.gitignore
</a>
</li>
<li class="file-stats">
<a href="#dea01dd89a3b602828e630677fde5d77c06441c8">
<span class="new-file">
+
.travis.yml
</span>
</a>
</li>
<li class="file-stats">
<a href="#8ec9a00bfd09b3190ac6b22251dbb1aa95a0579d">
README.md
</a>
</li>
<li class="file-stats">
<a href="#f60133a4cdbf56999bb8caf361866b541c61b231">
bin/prokka
</a>
</li>
<li class="file-stats">
<a href="#78e7dafc4ccbbd4e358abb7261b383907fedfcda">
<span class="new-file">
+
bin/prokka-abricate_to_fasta_db
</span>
</a>
</li>
<li class="file-stats">
<a href="#8e718194f52500ddc6634eb31abce4134eb40114">
bin/prokka-biocyc_to_fasta_db
</a>
</li>
<li class="file-stats">
<a href="#39c9ec4cbc58f171d33fc18095321ced428b0dc4">
bin/prokka-build_kingdom_dbs
</a>
</li>
<li class="file-stats">
<a href="#b139cec3594d68347b4fa9d27e67554372060656">
bin/prokka-cdd_to_hmm
</a>
</li>
<li class="file-stats">
<a href="#5a01ad3f1118cfa710ad84694d00ae4a7e37fcb5">
bin/prokka-clusters_to_hmm
</a>
</li>
<li class="file-stats">
<a href="#f1080f4ba32da6679c45e257a22eda7f4cbc877a">
bin/prokka-genbank_to_fasta_db
</a>
</li>
<li class="file-stats">
<a href="#e8b90acbf683ddc792cc987b82cf112c214525a6">
bin/prokka-genpept_to_fasta_db
</a>
</li>
<li class="file-stats">
<a href="#2877fcdc673a867f46921299db4c1b6cb1b51b00">
bin/prokka-hamap_to_hmm
</a>
</li>
<li class="file-stats">
<a href="#2e3063332909bf80733dfec42181ae92c9c79c39">
bin/prokka-uniprot_to_fasta_db
</a>
</li>
<li class="file-stats">
<a href="#448bcb3b3707f2adbb83837a3f39cd86b1704069">
db/cm/Bacteria
</a>
</li>
<li class="file-stats">
<a href="#d3db9c58f2e10cf02af466c553a82c900e0c85af">
<span class="new-file">
+
db/genus/Escherichia
</span>
</a>
</li>
<li class="file-stats">
<a href="#15a3036fe7b3364b4df17b8dd76a41eceae9b6aa">
db/hmm/HAMAP.hmm
</a>
</li>
<li class="file-stats">
<a href="#183559170bba0c13943404c29ced00eff02e1175">
db/kingdom/Archaea/sprot
</a>
</li>
<li class="file-stats">
<a href="#a86e8e984fc1c033c55242b0d1c2778631a60527">
<span class="new-file">
+
db/kingdom/Bacteria/AMR
</span>
</a>
</li>
<li class="file-stats">
<a href="#dbb95dc45b1321f6b66bfdad83554cbbf890b037">
<span class="new-file">
+
db/kingdom/Bacteria/IS
</span>
</a>
</li>
<li class="file-stats">
<a href="#bb3f2d3668cb7051b5f618c3540217a32c4bbbc4">
db/kingdom/Bacteria/sprot
</a>
</li>
<li class="file-stats">
<a href="#e5626c25bfa779f8e06e03559a6ae8952dcaa2a9">
db/kingdom/Viruses/sprot
</a>
</li>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#78fd675df1cf8c2d4c62ae1a9a912d15c8c50ba4">
debian/compat
</a>
</li>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
</a>
</li>
<li class="file-stats">
<a href="#adb7f75f79e3bb85eb62912a2904c5d24af878fb">
debian/copyright
</a>
</li>
<li class="file-stats">
<a href="#c7d317ff5f67a0d69bdebe0b1fad72b2750a6dda">
debian/patches/set-db-dir
</a>
</li>
<li class="file-stats">
<a href="#8756c63497c8dc39f7773438edf53b220c773f67">
debian/rules
</a>
</li>
<li class="file-stats">
<a href="#0ee0f3770b4d5b1a270aa0e131cf15d0b66e2d4b">
doc/ChangeLog.txt
</a>
</li>
<li class="file-stats">
<a href="#2ec50c93ca5c8bb12bd6d678dd2dee498d47f153">
<span class="new-file">
+
doc/prokka-manual.txt
</span>
</a>
</li>
<li class="file-stats">
<a href="#2487c7d2ac07fc122de3374723cb3827837f0910">
<span class="new-file">
+
doc/update_manual.sh
</span>
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
<div class="footer" style="margin-top: 10px;">
<p style="font-size: small; color: #777;">
—
<br>
<a href="https://salsa.debian.org/med-team/prokka/compare/58e30a9267880817558511272d106037e9904f04...1c5fc587f7342a5e5456eda3bf2f52e021c631cd">View it on GitLab</a>.
<br>
You're receiving this email because of your account on salsa.debian.org.
If you'd like to receive fewer emails, you can
adjust your notification settings.
</p>
</div>
</body>
</html>