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<h3>
Steffen Möller pushed to branch master
at <a href="https://salsa.debian.org/med-team/plip">Debian Med / plip</a>
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<h4>
Commits:
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<ul>
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<strong><a href="https://salsa.debian.org/med-team/plip/commit/9a4faf7ef0b998ae3dc03db1f79858b21f74f2fa">9a4faf7e</a></strong>
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<span>by Steffen Möller</span>
<i>at 2018-10-17T09:50:48Z</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Getting plipcmd to work
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<h4>4 changed files:</h4>
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<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
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<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
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<a href="#3deb03a061c437d49b1253606373cd1de6735cd8">
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+
debian/patches/executableIsForPython2Not3.patch
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<a href="#bc34014ab4b9a49dd7a27bdd8d352912607c3a96">
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+
debian/patches/series
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<h4>Changes:</h4>
<li id="9c96da0e9f91d7d8937b69b524702c106258f0d1">
<a href="https://salsa.debian.org/med-team/plip/commit/9a4faf7ef0b998ae3dc03db1f79858b21f74f2fa#9c96da0e9f91d7d8937b69b524702c106258f0d1"><strong>debian/changelog</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">plip (1.4.3~b+dfsg-2) UNRELEASED; urgency=medium</span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">plip (1.4.3~b+dfsg-2) unstable; urgency=medium</span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext"> * Team upload.</span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext"> * Hopefully fixed d/watch - who knows :o)</span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"> * Executable only works with python2, not 3</span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"> * Explicitly adding python-openbabel as a dependency to the binary</span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext"> package, which was omitted by the automatisms in place.</span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext"> -- Steffen Moeller <moeller@debian.org> Tue, 16 Oct 2018 16:21:48 +0200</span>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="plaintext"></span>
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<li id="58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
<a href="https://salsa.debian.org/med-team/plip/commit/9a4faf7ef0b998ae3dc03db1f79858b21f74f2fa#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2"><strong>debian/control</strong></a>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="20" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="20" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -20,7 +20,8 @@ Homepage: https://projects.biotec.tu-dresden.de/plip-web/plip/</td>
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<pre style="margin: 0;"> <span id="LC20" class="line" lang="plaintext">Package: plip</span>
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<pre style="margin: 0;"> <span id="LC21" class="line" lang="plaintext">Architecture: all</span>
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<pre style="margin: 0;"> <span id="LC22" class="line" lang="plaintext">Depends: ${misc:Depends},</span>
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<pre style="margin: 0;">-<span id="LC23" class="line" lang="plaintext"> ${python:Depends}</span>
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<pre style="margin: 0;">+<span id="LC23" class="line" lang="plaintext"> ${python:Depends},</span>
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<pre style="margin: 0;">+<span id="LC24" class="line" lang="plaintext"> python-openbabel</span>
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<pre style="margin: 0;"> <span id="LC25" class="line" lang="plaintext">Suggests: pymol</span>
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<pre style="margin: 0;"> <span id="LC26" class="line" lang="plaintext">Description: fully automated protein-ligand interaction profiler</span>
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<pre style="margin: 0;"> <span id="LC27" class="line" lang="plaintext"> The Protein-Ligand Interaction Profiler (PLIP) is a tool to analyze</span>
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<li id="3deb03a061c437d49b1253606373cd1de6735cd8">
<a href="https://salsa.debian.org/med-team/plip/commit/9a4faf7ef0b998ae3dc03db1f79858b21f74f2fa#3deb03a061c437d49b1253606373cd1de6735cd8"><strong>debian/patches/executableIsForPython2Not3.patch</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="diff"><span class="gh" style="color: #999;">Index: plip/plip/plipcmd.py</span></span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="diff"><span class="gh" style="color: #999;">===================================================================</span></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- plip.orig/plip/plipcmd.py</span></span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ plip/plip/plipcmd.py</span></span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="diff"><span class="gu" style="color: #800080; font-weight: 600;">@@ -1,4 +1,4 @@</span></span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-#! /usr/bin/env python</span></span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#!/usr/bin/python2</span></span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="diff"> """</span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="diff"> Protein-Ligand Interaction Profiler - Analyze and visualize protein-ligand interactions in PDB files.</span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="diff"> plipcmd.py - Main script for PLIP command line execution.</span></pre>
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<a href="https://salsa.debian.org/med-team/plip/commit/9a4faf7ef0b998ae3dc03db1f79858b21f74f2fa#bc34014ab4b9a49dd7a27bdd8d352912607c3a96"><strong>debian/patches/series</strong></a>
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1
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">executableIsForPython2Not3.patch</span></pre>
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