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<h3>
Jelmer Vernooij pushed to branch master
at <a href="https://salsa.debian.org/med-team/emboss">Debian Med / emboss</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/emboss/commit/4cdc425f9de8317e8dc02e5359a11e2aa7af51bf">4cdc425f</a></strong>
<div>
<span>by Jelmer Vernooij</span>
<i>at 2018-10-20T20:38:05Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Trim trailing whitespace.
Fixes lintian: file-contains-trailing-whitespace
See https://lintian.debian.org/tags/file-contains-trailing-whitespace.html for more details.
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/emboss/commit/5cd80a17fd93f4f6a5b543a6471c2d224fa0a0fe">5cd80a17</a></strong>
<div>
<span>by Jelmer Vernooij</span>
<i>at 2018-10-20T20:38:10Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Use secure copyright file specification URI.
Fixes lintian: insecure-copyright-format-uri
See https://lintian.debian.org/tags/insecure-copyright-format-uri.html for more details.
</pre>
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<h4>2 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#adb7f75f79e3bb85eb62912a2904c5d24af878fb">
debian/copyright
</a>
</li>
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<h4>Changes:</h4>
<li id="9c96da0e9f91d7d8937b69b524702c106258f0d1">
<a href="https://salsa.debian.org/med-team/emboss/compare/1f6d29ebeaa4feb00772ffdb299402083e1c9c5b...5cd80a17fd93f4f6a5b543a6471c2d224fa0a0fe#9c96da0e9f91d7d8937b69b524702c106258f0d1"><strong>debian/changelog</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="mosel"><span class="n" style="color: #333;">emboss</span> <span class="p">(</span><span class="m" style="color: #099;">6.6.0</span><span class="p">+</span><span class="n" style="color: #333;">dfsg</span><span class="p">-</span><span class="m" style="color: #099;">8</span><span class="p">)</span> <span class="n" style="color: #333;">UNRELEASED</span><span class="p">;</span> <span class="n" style="color: #333;">urgency</span><span class="p">=</span><span class="n" style="color: #333;">medium</span></span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="mosel"></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="mosel"> <span class="p">*</span> <span class="nf" style="color: #900; font-weight: 600;">Trim</span> <span class="n" style="color: #333;">trailing</span> <span class="n" style="color: #333;">whitespace</span><span class="p">.</span></span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="mosel"> <span class="p">*</span> <span class="n" style="color: #333;">Use</span> <span class="n" style="color: #333;">secure</span> <span class="n" style="color: #333;">copyright</span> <span class="n" style="color: #333;">file</span> <span class="n" style="color: #333;">specification</span> <span class="n" style="color: #333;">URI</span><span class="p">.</span></span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="mosel"></span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="mosel"> <span class="p">--</span> <span class="n" style="color: #333;">Jelmer</span> <span class="n" style="color: #333;">Vernoo</span><span class="err" style="color: #a61717; background-color: #e3d2d2;">ij</span> <span class="p"><</span><span class="n" style="color: #333;">jelmer</span><span class="p">@</span><span class="n" style="color: #333;">debian</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">></span> <span class="n" style="color: #333;">Sat</span><span class="p">,</span> <span class="m" style="color: #099;">20</span> <span class="n" style="color: #333;">Oct</span> <span class="m" style="color: #099;">2018</span> <span class="m" style="color: #099;">20</span><span class="p">:</span><span class="m" style="color: #099;">38</span><span class="p">:</span><span class="m" style="color: #099;">05</span> <span class="p">+</span><span class="m" style="color: #099;">0000</span></span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="mosel"></span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="mosel"><span class="n" style="color: #333;">emboss</span> <span class="p">(</span><span class="m" style="color: #099;">6.6.0</span><span class="p">+</span><span class="n" style="color: #333;">dfsg</span><span class="p">-</span><span class="m" style="color: #099;">7</span><span class="p">)</span> <span class="n" style="color: #333;">unstable</span><span class="p">;</span> <span class="n" style="color: #333;">urgency</span><span class="p">=</span><span class="n" style="color: #333;">medium</span></span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="mosel"></span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="mosel"> <span class="p">*</span> <span class="n" style="color: #333;">debhelper</span> <span class="m" style="color: #099;">11</span></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="299" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="306" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -299,7 +306,7 @@ emboss (6.1.0-2) unstable; urgency=low</td>
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<pre style="margin: 0;"> <span id="LC306" class="line" lang="mosel"><span class="s1" style="color: #d14;"> - Correct issues in igstrict, genpept and refseqp formats</span></span>
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<pre style="margin: 0;"> <span id="LC307" class="line" lang="mosel"><span class="s1" style="color: #d14;"> * debian/control:</span></span>
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<pre style="margin: 0;"> <span id="LC308" class="line" lang="mosel"><span class="s1" style="color: #d14;"> - Incremented Standards-Version to reflect conformance with Policy 3.8.2</span></span>
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<pre style="margin: 0;">-<span id="LC302" class="line" lang="mosel"><span class="s1" style="color: #d14;"> (no changes needed).<span class="idiff left right"> </span></span></span>
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<pre style="margin: 0;">+<span id="LC309" class="line" lang="mosel"><span class="s1" style="color: #d14;"> (no changes needed).</span></span>
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<pre style="margin: 0;"> <span id="LC310" class="line" lang="mosel"><span class="s1" style="color: #d14;"> * debian/copyright.introduction:</span></span>
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<pre style="margin: 0;"> <span id="LC311" class="line" lang="mosel"><span class="s1" style="color: #d14;"> - Use symbolic links to refer to relevant versions of the GNU licenses.</span></span>
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<pre style="margin: 0;"> <span id="LC312" class="line" lang="mosel"></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="379" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="386" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -379,7 +386,7 @@ emboss (6.0.1-6) unstable; urgency=low</td>
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386
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<pre style="margin: 0;"> <span id="LC386" class="line" lang="mosel"> <span class="p">-</span> <span class="n" style="color: #333;">Build</span> <span class="n" style="color: #333;">arch</span> <span class="n" style="color: #333;">all</span> <span class="n" style="color: #333;">packages</span> <span class="n" style="color: #333;">only</span> <span class="n" style="color: #333;">when</span> <span class="n" style="color: #333;">binary</span><span class="p">-</span><span class="n" style="color: #333;">indep</span> <span class="n" style="color: #333;">is</span> <span class="n" style="color: #333;">called</span></span>
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380
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387
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<pre style="margin: 0;"> <span id="LC387" class="line" lang="mosel"> <span class="p">(</span><span class="n" style="color: #333;">Closes</span><span class="p">:</span> <span class="p">#</span><span class="m" style="color: #099;">521398</span><span class="p">)</span></span>
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381
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388
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<pre style="margin: 0;"> <span id="LC388" class="line" lang="mosel"> <span class="p">-</span> <span class="n" style="color: #333;">Corrected</span> <span class="n" style="color: #333;">stamping</span> <span class="n" style="color: #333;">gymnastics</span><span class="p">.</span></span>
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382
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<pre style="margin: 0;">-<span id="LC382" class="line" lang="mosel"> <span class="p">*</span> <span class="n" style="color: #333;">debian</span><span class="p">/</span><span class="n" style="color: #333;">control</span><span class="p">:</span> <span class="n" style="color: #333;">moved</span> <span class="n" style="color: #333;">openjdk</span><span class="p">-</span><span class="m" style="color: #099;">6</span><span class="p">-</span><span class="n" style="color: #333;">jdk</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">Build</span><span class="p">-</span><span class="n" style="color: #333;">Depends</span><span class="p">-</span><span class="n" style="color: #333;">Indep</span><span class="idiff left right"> </span></span>
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389
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<pre style="margin: 0;">+<span id="LC389" class="line" lang="mosel"> <span class="p">*</span> <span class="n" style="color: #333;">debian</span><span class="p">/</span><span class="n" style="color: #333;">control</span><span class="p">:</span> <span class="n" style="color: #333;">moved</span> <span class="n" style="color: #333;">openjdk</span><span class="p">-</span><span class="m" style="color: #099;">6</span><span class="p">-</span><span class="n" style="color: #333;">jdk</span> <span class="k" style="font-weight: 600;">to</span> <span class="n" style="color: #333;">Build</span><span class="p">-</span><span class="n" style="color: #333;">Depends</span><span class="p">-</span><span class="n" style="color: #333;">Indep</span></span>
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383
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390
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<pre style="margin: 0;"> <span id="LC390" class="line" lang="mosel"></span>
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384
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391
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<pre style="margin: 0;"> <span id="LC391" class="line" lang="mosel"> <span class="p">--</span> <span class="n" style="color: #333;">Charles</span> <span class="n" style="color: #333;">Plessy</span> <span class="p"><</span><span class="n" style="color: #333;">plessy</span><span class="p">@</span><span class="n" style="color: #333;">debian</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">></span> <span class="n" style="color: #333;">Mon</span><span class="p">,</span> <span class="m" style="color: #099;">30</span> <span class="n" style="color: #333;">Mar</span> <span class="m" style="color: #099;">2009</span> <span class="m" style="color: #099;">13</span><span class="p">:</span><span class="m" style="color: #099;">02</span><span class="p">:</span><span class="m" style="color: #099;">11</span> <span class="p">+</span><span class="m" style="color: #099;">0900</span></span>
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385
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392
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<pre style="margin: 0;"> <span id="LC392" class="line" lang="mosel"></span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="600" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="607" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -600,7 +607,7 @@ emboss (4.1.0-1) experimental; urgency=low</td>
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600
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607
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<pre style="margin: 0;"> <span id="LC607" class="line" lang="mosel"> <span class="p">*</span> <span class="n" style="color: #333;">Added</span> <span class="n" style="color: #333;">XS</span><span class="p">-</span><span class="n" style="color: #333;">Vcs</span> <span class="n" style="color: #333;">entries</span> <span class="k" style="font-weight: 600;">in</span> <span class="n" style="color: #333;">debian</span><span class="p">/</span><span class="n" style="color: #333;">changelog</span><span class="p">.</span></span>
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601
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<td class="diff-line-num new_line" data-linenumber="608" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
608
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<pre style="margin: 0;"> <span id="LC608" class="line" lang="mosel"> <span class="p">*</span> <span class="n" style="color: #333;">Removed</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">pcre</span> <span class="n" style="color: #333;">includes</span> <span class="k" style="font-weight: 600;">from</span> <span class="n" style="color: #333;">the</span> <span class="n" style="color: #333;">emboss</span><span class="p">-</span><span class="n" style="color: #333;">libs</span> <span class="k" style="font-weight: 600;">package</span><span class="p">.</span></span>
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602
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609
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<pre style="margin: 0;"> <span id="LC609" class="line" lang="mosel"> <span class="p">*</span> <span class="n" style="color: #333;">Fixed</span> <span class="n" style="color: #333;">watch</span> <span class="n" style="color: #333;">file</span><span class="p">.</span></span>
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603
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<td class="diff-line-num new_line old" data-linenumber="610" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC603" class="line" lang="mosel"> <span class="p">*</span> <span class="n" style="color: #333;">Emboss</span> <span class="n" style="color: #333;">Recommends</span><span class="p">:</span><span class="n" style="color: #333;">dialign</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">Suggests</span><span class="p">:</span><span class="n" style="color: #333;">clustalw</span><span class="p">.</span><span class="idiff left right"> </span></span>
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610
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<pre style="margin: 0;">+<span id="LC610" class="line" lang="mosel"> <span class="p">*</span> <span class="n" style="color: #333;">Emboss</span> <span class="n" style="color: #333;">Recommends</span><span class="p">:</span><span class="n" style="color: #333;">dialign</span> <span class="k" style="font-weight: 600;">and</span> <span class="n" style="color: #333;">Suggests</span><span class="p">:</span><span class="n" style="color: #333;">clustalw</span><span class="p">.</span></span>
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604
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611
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<pre style="margin: 0;"> <span id="LC611" class="line" lang="mosel"></span>
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605
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612
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<pre style="margin: 0;"> <span id="LC612" class="line" lang="mosel"> <span class="p">--</span> <span class="n" style="color: #333;">Charles</span> <span class="n" style="color: #333;">Plessy</span> <span class="p"><</span><span class="n" style="color: #333;">charles</span><span class="p">-</span><span class="n" style="color: #333;">debian</span><span class="p">-</span><span class="n" style="color: #333;">nospam</span><span class="p">@</span><span class="n" style="color: #333;">plessy</span><span class="p">.</span><span class="n" style="color: #333;">org</span><span class="p">></span> <span class="n" style="color: #333;">Mon</span><span class="p">,</span> <span class="m" style="color: #099;">12</span> <span class="n" style="color: #333;">Mar</span> <span class="m" style="color: #099;">2007</span> <span class="m" style="color: #099;">08</span><span class="p">:</span><span class="m" style="color: #099;">26</span><span class="p">:</span><span class="m" style="color: #099;">15</span> <span class="p">+</span><span class="m" style="color: #099;">0900</span></span>
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606
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613
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<pre style="margin: 0;"> <span id="LC613" class="line" lang="mosel"></span>
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<a href="https://salsa.debian.org/med-team/emboss/compare/1f6d29ebeaa4feb00772ffdb299402083e1c9c5b...5cd80a17fd93f4f6a5b543a6471c2d224fa0a0fe#adb7f75f79e3bb85eb62912a2904c5d24af878fb"><strong>debian/copyright</strong></a>
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1
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/</span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">Format: http<span class="idiff left right">s</span>://www.debian.org/doc/packaging-manuals/copyright-format/1.0/</span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext">Upstream-Contact: EMBOSS core development team <emboss-bug@emboss.open-bio.org></span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext">Source: ftp://emboss.open-bio.org/pub/EMBOSS/</span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext"></span>
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