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<h3>

Olivier Sallou pushed to branch master

at <a href="https://salsa.debian.org/med-team/biomaj3-process">Debian Med / biomaj3-process</a>

</h3>

<h4>

Commits:

</h4>

<ul>

<li>

<strong><a href="https://salsa.debian.org/med-team/biomaj3-process/commit/0434aec8f92f365a4fed9777a7d5eedca6023deb">0434aec8</a></strong>

<div>

<span>by Olivier Sallou</span>

<i>at 2018-10-25T09:08:38Z</i>

</div>

<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 3.0.11</pre>

</li>

<li>

<strong><a href="https://salsa.debian.org/med-team/biomaj3-process/commit/b2614c5987f4324389b0f7e86ebe2cae1af77134">b2614c59</a></strong>

<div>

<span>by Olivier Sallou</span>

<i>at 2018-10-25T09:08:42Z</i>

</div>

<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Updated version 3.0.11 from 'upstream/3.0.11'

with Debian dir 607f7c34bfd4d08cf0506940013ed7987d44951f</pre>

</li>

<li>

<strong><a href="https://salsa.debian.org/med-team/biomaj3-process/commit/83899ece4705b1b988e00de0f4499822072ed4f9">83899ece</a></strong>

<div>

<span>by Olivier Sallou</span>

<i>at 2018-10-25T09:10:44Z</i>

</div>

<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">new upstream release 3.0.11

</pre>

</li>

</ul>

<h4>12 changed files:</h4>

<ul>

<li class="file-stats">

<a href="#3251d7a8143ce2e789f0468513df8f285f842c3a">

CHANGES.txt

</a>

</li>

<li class="file-stats">

<a href="#20b3c0916b8a53546817bae711fb2f43306738fb">

biomaj_process/biomaj_process_web.py

</a>

</li>

<li class="file-stats">

<a href="#555dcfd285353048509b7e1a65d4f816df2a1ad6">

biomaj_process/message/message.proto

→

biomaj_process/message/procmessage.proto

</a>

</li>

<li class="file-stats">

<a href="#525cc727cf22aa3d1c19295a4b10b6e31d47ff1e">

biomaj_process/message/message_pb2.py

→

biomaj_process/message/procmessage_pb2.py

</a>

</li>

<li class="file-stats">

<a href="#c64cf380e97bd16851046a1a21ad29409f70c02e">

biomaj_process/process.py

</a>

</li>

<li class="file-stats">

<a href="#bdb5bd09615175c5acd9aa01c1e7cf72d48af7b4">

biomaj_process/process_client.py

</a>

</li>

<li class="file-stats">

<a href="#361eb55d71f9bd98b35147fb607d76a76cfc60b1">

biomaj_process/process_service.py

</a>

</li>

<li class="file-stats">

<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">

debian/changelog

</a>

</li>

<li class="file-stats">

<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">

debian/control

</a>

</li>

<li class="file-stats">

<a href="#8756c63497c8dc39f7773438edf53b220c773f67">

debian/rules

</a>

</li>

<li class="file-stats">

<a href="#8e2edce0d507e1297474f25c00cae94258db38d8">

setup.py

</a>

</li>

<li class="file-stats">

<a href="#a5b5d0c7b9c558d9142a199ec517b633dd40faf5">

tests/biomaj_tests.py

</a>

</li>

</ul>

<h4>Changes:</h4>

<li id="3251d7a8143ce2e789f0468513df8f285f842c3a">

<a href="https://salsa.debian.org/med-team/biomaj3-process/compare/24108163e9687727cbc3319ff55fd5b7f1ef96ed...83899ece4705b1b988e00de0f4499822072ed4f9#3251d7a8143ce2e789f0468513df8f285f842c3a"><strong>CHANGES.txt</strong></a>

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1

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<td class="line_content noteable_line old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">

<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">3.0.10</span>

</pre>

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1

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<td class="line_content new noteable_line" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">3.0.11:</span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="2" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

2

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<td class="line_content new noteable_line" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC2" class="line" lang="plaintext">  Catch exception for microservices if remote server is not reachable</span>

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<td class="diff-line-num new new_line" data-linenumber="3" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

3

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<td class="line_content new noteable_line" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext">  Rename package for protobuf to avoid collisions</span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="2" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="diff-line-num new new_line" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

4

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<td class="line_content new noteable_line" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext">3.0.10:</span>

</pre>

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2

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<td class="diff-line-num new_line" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

5

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<td class="line_content noteable_line" style="padding-left: 0.5em; padding-right: 0.5em;">

<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext">  README doc fixes</span>

</pre>

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3

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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext">  Add dependency banks additional volumes for Docker</span>

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<td class="line_content noteable_line" style="padding-left: 0.5em; padding-right: 0.5em;">

<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext">3.0.9:</span>

</pre>

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<br>

</li>

<li id="20b3c0916b8a53546817bae711fb2f43306738fb">

<a href="https://salsa.debian.org/med-team/biomaj3-process/compare/24108163e9687727cbc3319ff55fd5b7f1ef96ed...83899ece4705b1b988e00de0f4499822072ed4f9#20b3c0916b8a53546817bae711fb2f43306738fb"><strong>biomaj_process/biomaj_process_web.py</strong></a>

<hr>

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<tr class="line_holder match" id="" style="line-height: 1.6;">

<td class="diff-line-num unfold js-unfold old_line" data-linenumber="17" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="diff-line-num unfold js-unfold new_line" data-linenumber="17" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -17,7 +17,7 @@ from prometheus_client import CollectorRegistry</td>

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<td class="line_content noteable_line" style="padding-left: 0.5em; padding-right: 0.5em;">

<pre style="margin: 0;"> <span id="LC17" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">consul</span></span>

</pre>

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<td class="line_content noteable_line" style="padding-left: 0.5em; padding-right: 0.5em;">

<pre style="margin: 0;"> <span id="LC18" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">redis</span></span>

</pre>

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<td class="diff-line-num new_line" data-linenumber="19" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="line_content noteable_line" style="padding-left: 0.5em; padding-right: 0.5em;">

<pre style="margin: 0;"> <span id="LC19" class="line" lang="python"></span>

</pre>

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<td class="diff-line-num old old_line" data-linenumber="20" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<td class="diff-line-num new_line old" data-linenumber="20" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<td class="line_content noteable_line old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">

<pre style="margin: 0;">-<span id="LC20" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">biomaj_process.message</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">message_pb2</span></span>

</pre>

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<td class="line_content new noteable_line" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC20" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">biomaj_process.message</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;"><span class="idiff left right">proc</span>message_pb2</span></span>

</pre>

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<td class="diff-line-num new_line" data-linenumber="21" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="line_content noteable_line" style="padding-left: 0.5em; padding-right: 0.5em;">

<pre style="margin: 0;"> <span id="LC21" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">biomaj_process.process_service</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">ProcessService</span></span>

</pre>

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<pre style="margin: 0;"> <span id="LC22" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">biomaj_core.utils</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">Utils</span></span>

</pre>

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<pre style="margin: 0;"> <span id="LC23" class="line" lang="python"></span>

</pre>

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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="97" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="diff-line-num unfold js-unfold new_line" data-linenumber="97" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -97,7 +97,7 @@ def create_session(bank):</td>

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<td class="diff-line-num old_line" data-linenumber="97" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC97" class="line" lang="python"><span class="o" style="font-weight: 600;">@</span><span class="n" style="color: #333;">app</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">route</span><span class="p">(</span><span class="s" style="color: #d14;">'/api/process/session/<bank>/<session>'</span><span class="p">,</span> <span class="n" style="color: #333;">methods</span><span class="o" style="font-weight: 600;">=</span><span class="p">[</span><span class="s" style="color: #d14;">'DELETE'</span><span class="p">])</span></span>

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<pre style="margin: 0;"> <span id="LC98" class="line" lang="python"><span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">clean_session</span><span class="p">(</span><span class="n" style="color: #333;">bank</span><span class="p">,</span> <span class="n" style="color: #333;">session</span><span class="p">):</span></span>

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<pre style="margin: 0;"> <span id="LC99" class="line" lang="python">    <span class="n" style="color: #333;">dserv</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">ProcessService</span><span class="p">(</span><span class="n" style="color: #333;">config_file</span><span class="p">,</span> <span class="n" style="color: #333;">rabbitmq</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">False</span><span class="p">)</span></span>

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<pre style="margin: 0;">-<span id="LC100" class="line" lang="python">    <span class="n" style="color: #333;">biomaj_file_info</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">message_pb2</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">Process</span><span class="p">()</span></span>

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<pre style="margin: 0;">+<span id="LC100" class="line" lang="python">    <span class="n" style="color: #333;">biomaj_file_info</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;"><span class="idiff left right">proc</span>message_pb2</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">Process</span><span class="p">()</span></span>

</pre>

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<pre style="margin: 0;"> <span id="LC101" class="line" lang="python">    <span class="n" style="color: #333;">biomaj_file_info</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">bank</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">bank</span></span>

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<pre style="margin: 0;"> <span id="LC102" class="line" lang="python">    <span class="n" style="color: #333;">biomaj_file_info</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">session</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">session</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="103" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC103" class="line" lang="python">    <span class="n" style="color: #333;">dserv</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">clean</span><span class="p">(</span><span class="n" style="color: #333;">biomaj_file_info</span><span class="p">)</span></span>

</pre>

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<br>

</li>

<li id="555dcfd285353048509b7e1a65d4f816df2a1ad6">

<a href="https://salsa.debian.org/med-team/biomaj3-process/compare/24108163e9687727cbc3319ff55fd5b7f1ef96ed...83899ece4705b1b988e00de0f4499822072ed4f9#555dcfd285353048509b7e1a65d4f816df2a1ad6"><strong>biomaj_process/message/message.proto</strong>

→

<strong>biomaj_process/message/procmessage.proto</strong>

</a>

<hr>

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<td class="diff-line-num old old_line" data-linenumber="1" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

1

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<td class="diff-line-num new_line old" data-linenumber="1" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<pre style="margin: 0;">-<span id="LC1" class="line" lang="protobuf"><span class="kn" style="font-weight: 600;">package</span> <span class="nn" style="color: #555;">biomaj</span><span class="p">;</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="2" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="diff-line-num new new_line" data-linenumber="1" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC1" class="line" lang="protobuf"><span class="kn" style="font-weight: 600;">package</span> <span class="nn" style="color: #555;">biomaj</span><span class="o" style="font-weight: 600;"><span class="idiff left">.</span></span><span class="n" style="color: #333;"><span class="idiff right">process</span></span><span class="p">;</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="2" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="2" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC2" class="line" lang="protobuf"></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="3" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC3" class="line" lang="protobuf"><span class="kd" style="font-weight: 600;">message</span> <span class="nc" style="color: #458; font-weight: 600;">Process</span> <span class="p">{</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

4

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<td class="diff-line-num new_line" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC4" class="line" lang="protobuf"></span>

</pre>

</td>

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<br>

</li>

<li id="525cc727cf22aa3d1c19295a4b10b6e31d47ff1e">

<a href="https://salsa.debian.org/med-team/biomaj3-process/compare/24108163e9687727cbc3319ff55fd5b7f1ef96ed...83899ece4705b1b988e00de0f4499822072ed4f9#525cc727cf22aa3d1c19295a4b10b6e31d47ff1e"><strong>biomaj_process/message/message_pb2.py</strong>

→

<strong>biomaj_process/message/procmessage_pb2.py</strong>

</a>

<hr>

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1

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<td class="diff-line-num new_line" data-linenumber="1" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

1

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<pre style="margin: 0;"> <span id="LC1" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># Generated by the protocol buffer compiler.  DO NOT EDIT!</span></span>

</pre>

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<pre style="margin: 0;">-<span id="LC2" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># source: message.proto</span></span>

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2

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<pre style="margin: 0;">+<span id="LC2" class="line" lang="python"><span class="c1" style="color: #998; font-style: italic;"># source: <span class="idiff left right">proc</span>message.proto</span></span>

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<td class="diff-line-num old_line" data-linenumber="3" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

3

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<td class="diff-line-num new_line" data-linenumber="3" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

3

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<pre style="margin: 0;"> <span id="LC3" class="line" lang="python"></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="4" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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4

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<pre style="margin: 0;"> <span id="LC4" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">sys</span></span>

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<td class="diff-line-num old_line" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

5

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<td class="diff-line-num new_line" data-linenumber="5" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC5" class="line" lang="python"><span class="n" style="color: #333;">_b</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">sys</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">version_info</span><span class="p">[</span><span class="mi" style="color: #099;">0</span><span class="p">]</span><span class="o" style="font-weight: 600;"><</span><span class="mi" style="color: #099;">3</span> <span class="ow" style="font-weight: 600;">and</span> <span class="p">(</span><span class="k" style="font-weight: 600;">lambda</span> <span class="n" style="color: #333;">x</span><span class="p">:</span><span class="n" style="color: #333;">x</span><span class="p">)</span> <span class="ow" style="font-weight: 600;">or</span> <span class="p">(</span><span class="k" style="font-weight: 600;">lambda</span> <span class="n" style="color: #333;">x</span><span class="p">:</span><span class="n" style="color: #333;">x</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">encode</span><span class="p">(</span><span class="s" style="color: #d14;">'latin1'</span><span class="p">))</span></span>

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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="16" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="diff-line-num unfold js-unfold new_line" data-linenumber="16" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -16,9 +16,9 @@ _sym_db = _symbol_database.Default()</td>

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<pre style="margin: 0;"> <span id="LC16" class="line" lang="python"></span>

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<pre style="margin: 0;"> <span id="LC17" class="line" lang="python"></span>

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<td class="diff-line-num old_line" data-linenumber="18" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC18" class="line" lang="python"><span class="n" style="color: #333;">DESCRIPTOR</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">_descriptor</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">FileDescriptor</span><span class="p">(</span></span>

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<pre style="margin: 0;">-<span id="LC19" class="line" lang="python">  <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'message.proto'</span><span class="p">,</span></span>

</pre>

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<pre style="margin: 0;">-<span id="LC20" class="line" lang="python">  <span class="n" style="color: #333;">package</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj'</span><span class="p">,</span></span>

</pre>

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<td class="line_content noteable_line old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">

<pre style="margin: 0;">-<span id="LC21" class="line" lang="python">  <span class="n" style="color: #333;">serialized_pb</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">_b</span><span class="p">(</span><span class="s" style="color: #d14;">'</span><span class="se" style="color: #d14;">\n\<span class="idiff left">r</span></span><span class="s" style="color: #d14;"><span class="idiff">message.proto</span></span><span class="se" style="color: #d14;"><span class="idiff">\x12\x06\x62</span></span><span class="s" style="color: #d14;"><span class="idiff">iomaj</span></span><span class="se" style="color: #d14;"><span class="idiff">\"\xec\x02\n\x07</span></span><span class="s" style="color: #d14;"><span class="idiff">Process</span></span><span class="se" style="color: #d14;"><span class="idiff">\x12\x0c\n\x04\x62\x61</span></span><span class="s" style="color: #d14;"><span class="idiff">nk</span></span><span class="se" style="color: #d14;"><span class="idiff">\x18\x01</span></span><span class="s" style="color: #d14;"><span class="idiff"> </span></span><span class="se" style="color: #d14;"><span class="idiff">\x02</span></span><span class="s" style="color: #d14;"><span class="idiff">(</span></span><span class="se" style="color: #d14;"><span class="idiff">\t\x12\x0f\n\x07</span></span><span class="s" style="color: #d14;"><span class="idiff">session</span></span><span class="se" style="color: #d14;"><span class="idiff">\x18\x02</span></span><span class="s" style="color: #d14;"><span class="idiff"> </span></span><span class="se" style="color: #d14;"><span class="idiff">\x02</span></span><span class="s" style="color: #d14;"><span class="idiff">(</span></span><span class="se" style="color: #d14;"><span class="idiff">\t\x12\x0f\n\x07</span></span><span class="s" style="color: #d14;"><span class="idiff">log_dir</span></span><span class="se" style="color: #d14;"><span class="idiff">\x18\x03</span></span><span class="s" style="color: #d14;"><span class="idiff"> </span></span><span class="se" style="color: #d14;"><span class="idiff">\x02</span></span><span class="s" style="color: #d14;"><span class="idiff">(</span></span><span class="se" style="color: #d14;"><span class="idiff">\t\x12\x0b\n\x03\x65</span></span><span class="s" style="color: #d14;"><span class="idiff">xe</span></span><span class="se" style="color: #d14;"><span class="idiff">\x18\x04</span></span><span class="s" style="color: #d14;"><span class="idiff"> </span></span><span class="se" style="color: #d14;"><span class="idiff">\x02</span></span><span class="s" style="color: #d14;"><span class="idiff">(</span></span><span class="se" style="color: #d14;"><span class="idiff">\t\x12\x0c\n\x04\x61</span></span><span class="s" style="color: #d14;"><span class="idiff">rgs</span></span><span class="se" style="color: #d14;"><span class="idiff">\x18\x05</span></span><span class="s" style="color: #d14;"><span class="idiff"> </span></span><span class="se" style="color: #d14;"><span class="idiff">\x03</span></span><span class="s" style="color: #d14;"><span class="idiff">(</span></span><span class="se" style="color: #d14;"><span class="idiff">\t\x12</span></span><span class="s" style="color: #d14;"><span class="idiff">(</span></span><span class="se" style="color: #d14;"><span class="idiff">\n\x08\x65</span></span><span class="s" style="color: #d14;"><span class="idiff">nv_vars</span></span><span class="se" style="color: #d14;"><span class="idiff">\x18\x06</span></span><span class="s" style="color: #d14;"><span class="idiff"> </span></span><span class="se" style="color: #d14;"><span class="idiff">\x03</span></span><span class="s" style="color: #d14;"><span class="idiff">(</span></span><span class="se" style="color: #d14;"><span class="idiff">\x0b\x32\x16</span></span><span class="s" style="color: #d14;"><span class="idiff">.biomaj.Process.EnvVar</span></span><span class="se" style="color: #d14;"><span class="idiff">\x12\x1b\n\x0c</span></span><span class="s" style="color: #d14;"><span class="idiff">shell_expand</span></span><span class="se" style="color: #d14;"><span class="idiff">\x18\x07</span></span><span class="s" style="color: #d14;"><span class="idiff"> </span></span><span class="se" style="color: #d14;"><span class="idiff">\x01</span></span><span class="s" style="color: #d14;"><span class="idiff">(</span></span><span class="se" style="color: #d14;"><span class="idiff">\x08</span></span><span class="s" style="color: #d14;"><span class="idiff">:</span></span><span class="se" style="color: #d14;"><span class="idiff">\x05\x66\x61</span></span><span class="s" style="color: #d14;"><span class="idiff">lse</span></span><span class="se" style="color: #d14;"><span class="idiff">\x12\x0c\n\x04</span></span><span class="s" style="color: #d14;"><span class="idiff">name</span></span><span class="se" style="color: #d14;"><span class="idiff">\x18\x08</span></span><span class="s" style="color: #d14;"><span class="idiff"> </span></span><span class="se" style="color: #d14;"><span class="idiff">\x01</span></span><span class="s" style="color: #d14;"><span class="idiff">(</span></span><span class="se" style="color: #d14;"><span class="idiff">\t\x12\x13\n\x0b\x64\x65</span></span><span class="s" style="color: #d14;"><span class="idiff">scription</span></span><span class="se" style="color: #d14;"><span class="idiff">\x18\t</span></span><span class="s" style="color: #d14;"><span class="idiff"> </span></span><span class="se" style="color: #d14;"><span class="idiff">\x01</span></span><span class="s" style="color: #d14;"><span class="idiff">(</span></span><span class="se" style="color: #d14;"><span class="idiff">\t\x12\x11\n\t</span></span><span class="s" style="color: #d14;"><span class="idiff">proc_type</span></span><span class="se" style="color: #d14;"><span class="idiff">\x18\n</span></span><span class="s" style="color: #d14;"><span class="idiff"> </span></span><span class="se" style="color: #d14;"><span class="idiff">\x01</span></span><span class="s" style="color: #d14;"><span class="idiff">(</span></span><span class="se" style="color: #d14;"><span class="idiff">\t\x12\x18\n\t</span></span><span class="s" style="color: #d14;"><span class="idiff">is_docker</span></span><span class="se" style="color: #d14;"><span class="idiff">\x18\x0b</span></span><span class="s" style="color: #d14;"><span class="idiff"> </span></span><span class="se" style="color: #d14;"><span class="idiff">\x01</span></span><span class="s" style="color: #d14;"><span class="idiff">(</span></span><span class="se" style="color: #d14;"><span class="idiff">\x08</span></span><span class="s" style="color: #d14;"><span class="idiff">:</span></span><span class="se" style="color: #d14;"><span class="idiff">\x05\x66\x61</span></span><span class="s" style="color: #d14;"><span class="idiff">lse</span></span><span class="se" style="color: #d14;"><span class="idiff">\x12</span></span><span class="s" style="color: #d14;"><span class="idiff">&</span></span><span class="se" style="color: #d14;"><span class="idiff">\n\x06\x64</span></span><span class="s" style="color: #d14;"><span class="idiff">ocker</span></span><span class="se" style="color: #d14;"><span class="idiff">\x18\x0c</span></span><span class="s" style="color: #d14;"><span class="idiff"> </span></span><span class="se" style="color: #d14;"><span class="idiff">\x01</span></span><span class="s" style="color: #d14;"><span class="idiff">(</span></span><span class="se" style="color: #d14;"><span class="idiff">\x0b\x32\x16</span></span><span class="s" style="color: #d14;"><span class="idiff">.biomaj.Process.Docker</span></span><span class="se" style="color: #d14;"><span class="idiff">\x1a</span></span><span class="si" style="color: #d14;"><span class="idiff">%</span></span><span class="se" style="color: #d14;"><span class="idiff">\n\x06\x45</span></span><span class="s" style="color: #d14;"><span class="idiff">nvVar</span></span><span class="se" style="color: #d14;"><span class="idiff">\x12\x0c\n\x04</span></span><span class="s" style="color: #d14;"><span class="idiff">name</span></span><span class="se" style="color: #d14;"><span class="idiff">\x18\x01</span></span><span class="s" style="color: #d14;"><span class="idiff"> </span></span><span class="se" style="color: #d14;"><span class="idiff">\x02</span></span><span class="s" style="color: #d14;"><span class="idiff">(</span></span><span class="se" style="color: #d14;"><span class="idiff">\t\x12\r\n\x05</span></span><span class="s" style="color: #d14;"><span class="idiff">value</span></span><span class="se" style="color: #d14;"><span class="idiff">\x18\x02</span></span><span class="s" style="color: #d14;"><span class="idiff"> </span></span><span class="se" style="color: #d14;"><span class="idiff">\x02</span></span><span class="s" style="color: #d14;"><span class="idiff">(</span></span><span class="se" style="color: #d14;"><span class="idiff">\t\x1a\x30\n\x06\x44</span></span><span class="s" style="color: #d14;"><span class="idiff">ocker</span></span><span class="se" style="color: #d14;"><span class="idiff">\x12\r\n\x05</span></span><span class="s" style="color: #d14;"><span class="idiff">image</span></span><span class="se" style="color: #d14;"><span class="idiff">\x18\x01</span></span><span class="s" style="color: #d14;"><span class="idiff"> </span></span><span class="se" style="color: #d14;"><span class="idiff">\x02</span></span><span class="s" style="color: #d14;"><span class="idiff">(</span></span><span class="se" style="color: #d14;"><span class="idiff">\t\x12\x17\n\x08</span></span><span class="s" style="color: #d14;"><span class="idiff">use_sudo</span></span><span class="se" style="color: #d14;"><span class="idiff">\x18\x02</span></span><span class="s" style="color: #d14;"><span class="idiff"> </span></span><span class="se" style="color: #d14;"><span class="idiff">\x01</span></span><span class="s" style="color: #d14;"><span class="idiff">(</span></span><span class="se" style="color: #d14;"><span class="idiff">\x08</span></span><span class="s" style="color: #d14;"><span class="idiff">:</span></span><span class="se" style="color: #d14;"><span class="idiff">\x05\x66\x61</span></span><span class="s" style="color: #d14;"><span class="idiff">lse</span></span><span class="se" style="color: #d14;"><span class="idiff">\"\xcf\x01\n\t</span></span><span class="s" style="color: #d14;"><span class="idiff">Operation</span></span><span class="se" style="color: #d14;"><span class="idiff">\x12</span></span><span class="s" style="color: #d14;"><span class="idiff"> </span></span><span class="se" style="color: #d14;"><span class="idiff">\n\x07</span></span><span class="s" style="color: #d14;"><span class="idiff">process</span></span><span class="se" style="color: #d14;"><span class="idiff">\x18\x01</span></span><span class="s" style="color: #d14;"><span class="idiff"> </span></span><span class="se" style="color: #d14;"><span class="idiff">\x01</span></span><span class="s" style="color: #d14;"><span class="idiff">(</span></span><span class="se" style="color: #d14;"><span class="idiff">\x0b\x32\x0f</span></span><span class="s" style="color: #d14;"><span class="idiff">.biomaj.Process</span></span><span class="se" style="color: #d14;"><span class="idiff">\x12\x32\n\x04</span></span><span class="s" style="color: #d14;"><span class="idiff">type</span></span><span class="se" style="color: #d14;"><span class="idiff">\x18\x02</span></span><span class="s" style="color: #d14;"><span class="idiff"> </span></span><span class="se" style="color: #d14;"><span class="idiff">\x02</span></span><span class="s" style="color: #d14;"><span class="idiff">(</span></span><span class="se" style="color: #d14;"><span class="idiff">\x0e\x32\x1b</span></span><span class="s" style="color: #d14;"><span class="idiff">.biomaj.Operation.OPERATION:</span></span><span class="se" style="color: #d14;"><span class="idiff">\x07\x45</span></span><span class="s" style="color: #d14;"><span class="idiff">XECUTE</span></span><span class="se" style="color: #d14;"><span class="idiff">\x12</span></span><span class="s" style="color: #d14;"><span class="idiff">&</span></span><span class="se" style="color: #d14;"><span class="idiff">\n\x05</span></span><span class="s" style="color: #d14;"><span class="idiff">trace</span></span><span class="se" style="color: #d14;"><span class="idiff">\x18\x03</span></span><span class="s" style="color: #d14;"><span class="idiff"> </span></span><span class="se" style="color: #d14;"><span class="idiff">\x01</span></span><span class="s" style="color: #d14;"><span class="idiff">(</span></span><span class="se" style="color: #d14;"><span class="idiff">\x0b\x32\x17</span></span><span class="s" style="color: #d14;"><span class="idiff right">.biomaj</span>.Operation.Trace</span><span class="se" style="color: #d14;">\x1a</span><span class="s" style="color: #d14;">*</span><span class="se" style="color: #d14;">\n\x05</span><span class="s" style="color: #d14;">Trace</span><span class="se" style="color: #d14;">\x12\x10\n\x08</span><span class="s" style="color: #d14;">trace_id</span><span class="se" style="color: #d14;">\x18\x01</span><span class="s" style="color: #d14;"> </span><span class="se" style="color: #d14;">\x02</span><span class="s" style="color: #d14;">(</span><span class="se" style="color: #d14;">\t\x12\x0f\n\x07</span><span class="s" style="color: #d14;">span_id</span><span class="se" style="color: #d14;">\x18\x02</span><span class="s" style="color: #d14;"> </span><span class="se" style="color: #d14;">\x02</span><span class="s" style="color: #d14;">(</span><span class="se" style="color: #d14;">\t\"\x18\n\t</span><span class="s" style="color: #d14;">OPERATION</span><span class="se" style="color: #d14;">\x12\x0b\n\x07\x45</span><span class="s" style="color: #d14;">XECUTE</span><span class="se" style="color: #d14;">\x10\x01</span><span class="s" style="color: #d14;">'</span><span class="p">)</span></span>

</pre>

</td>

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<tr class="line_holder new" id="" style="line-height: 1.6;">

<td class="diff-line-num new old_line" data-linenumber="22" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="19" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

19

</td>

<td class="line_content new noteable_line" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC19" class="line" lang="python">  <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'<span class="idiff left right">proc</span>message.proto'</span><span class="p">,</span></span>

</pre>

</td>

</tr>

<tr class="line_holder new" id="" style="line-height: 1.6;">

<td class="diff-line-num new old_line" data-linenumber="22" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="20" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

20

</td>

<td class="line_content new noteable_line" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC20" class="line" lang="python">  <span class="n" style="color: #333;">package</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj<span class="idiff left right">.process</span>'</span><span class="p">,</span></span>

</pre>

</td>

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<tr class="line_holder new" id="" style="line-height: 1.6;">

<td class="diff-line-num new old_line" data-linenumber="22" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="21" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

21

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<td class="line_content new noteable_line" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC21" class="line" lang="python">  <span class="n" style="color: #333;">serialized_pb</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">_b</span><span class="p">(</span><span class="s" style="color: #d14;">'</span><span class="se" style="color: #d14;">\n\<span class="idiff left">x11</span></span><span class="s" style="color: #d14;"><span class="idiff">procmessage.proto</span></span><span class="se" style="color: #d14;"><span class="idiff">\x12\x0e\x62</span></span><span class="s" style="color: #d14;"><span class="idiff">iomaj.process</span></span><span class="se" style="color: #d14;"><span class="idiff">\"\xfc\x02\n\x07</span></span><span class="s" style="color: #d14;"><span class="idiff">Process</span></span><span class="se" style="color: #d14;"><span class="idiff">\x12\x0c\n\x04\x62\x61</span></span><span class="s" style="color: #d14;"><span class="idiff">nk</span></span><span class="se" style="color: #d14;"><span class="idiff">\x18\x01</span></span><span class="s" style="color: #d14;"><span class="idiff"> </span></span><span class="se" style="color: #d14;"><span class="idiff">\x02</span></span><span class="s" style="color: #d14;"><span class="idiff">(</span></span><span class="se" style="color: #d14;"><span class="idiff">\t\x12\x0f\n\x07</span></span><span class="s" style="color: #d14;"><span class="idiff">session</span></span><span class="se" style="color: #d14;"><span class="idiff">\x18\x02</span></span><span class="s" style="color: #d14;"><span class="idiff"> </span></span><span class="se" style="color: #d14;"><span class="idiff">\x02</span></span><span class="s" style="color: #d14;"><span class="idiff">(</span></span><span class="se" style="color: #d14;"><span class="idiff">\t\x12\x0f\n\x07</span></span><span class="s" style="color: #d14;"><span class="idiff">log_dir</span></span><span class="se" style="color: #d14;"><span class="idiff">\x18\x03</span></span><span class="s" style="color: #d14;"><span class="idiff"> </span></span><span class="se" style="color: #d14;"><span class="idiff">\x02</span></span><span class="s" style="color: #d14;"><span class="idiff">(</span></span><span class="se" style="color: #d14;"><span class="idiff">\t\x12\x0b\n\x03\x65</span></span><span class="s" style="color: #d14;"><span class="idiff">xe</span></span><span class="se" style="color: #d14;"><span class="idiff">\x18\x04</span></span><span class="s" style="color: #d14;"><span class="idiff"> </span></span><span class="se" style="color: #d14;"><span class="idiff">\x02</span></span><span class="s" style="color: #d14;"><span class="idiff">(</span></span><span class="se" style="color: #d14;"><span class="idiff">\t\x12\x0c\n\x04\x61</span></span><span class="s" style="color: #d14;"><span class="idiff">rgs</span></span><span class="se" style="color: #d14;"><span class="idiff">\x18\x05</span></span><span class="s" style="color: #d14;"><span class="idiff"> </span></span><span class="se" style="color: #d14;"><span class="idiff">\x03</span></span><span class="s" style="color: #d14;"><span class="idiff">(</span></span><span class="se" style="color: #d14;"><span class="idiff">\t\x12\x30\n\x08\x65</span></span><span class="s" style="color: #d14;"><span class="idiff">nv_vars</span></span><span class="se" style="color: #d14;"><span class="idiff">\x18\x06</span></span><span class="s" style="color: #d14;"><span class="idiff"> </span></span><span class="se" style="color: #d14;"><span class="idiff">\x03</span></span><span class="s" style="color: #d14;"><span class="idiff">(</span></span><span class="se" style="color: #d14;"><span class="idiff">\x0b\x32\x1e</span></span><span class="s" style="color: #d14;"><span class="idiff">.biomaj.process.Process.EnvVar</span></span><span class="se" style="color: #d14;"><span class="idiff">\x12\x1b\n\x0c</span></span><span class="s" style="color: #d14;"><span class="idiff">shell_expand</span></span><span class="se" style="color: #d14;"><span class="idiff">\x18\x07</span></span><span class="s" style="color: #d14;"><span class="idiff"> </span></span><span class="se" style="color: #d14;"><span class="idiff">\x01</span></span><span class="s" style="color: #d14;"><span class="idiff">(</span></span><span class="se" style="color: #d14;"><span class="idiff">\x08</span></span><span class="s" style="color: #d14;"><span class="idiff">:</span></span><span class="se" style="color: #d14;"><span class="idiff">\x05\x66\x61</span></span><span class="s" style="color: #d14;"><span class="idiff">lse</span></span><span class="se" style="color: #d14;"><span class="idiff">\x12\x0c\n\x04</span></span><span class="s" style="color: #d14;"><span class="idiff">name</span></span><span class="se" style="color: #d14;"><span class="idiff">\x18\x08</span></span><span class="s" style="color: #d14;"><span class="idiff"> </span></span><span class="se" style="color: #d14;"><span class="idiff">\x01</span></span><span class="s" style="color: #d14;"><span class="idiff">(</span></span><span class="se" style="color: #d14;"><span class="idiff">\t\x12\x13\n\x0b\x64\x65</span></span><span class="s" style="color: #d14;"><span class="idiff">scription</span></span><span class="se" style="color: #d14;"><span class="idiff">\x18\t</span></span><span class="s" style="color: #d14;"><span class="idiff"> </span></span><span class="se" style="color: #d14;"><span class="idiff">\x01</span></span><span class="s" style="color: #d14;"><span class="idiff">(</span></span><span class="se" style="color: #d14;"><span class="idiff">\t\x12\x11\n\t</span></span><span class="s" style="color: #d14;"><span class="idiff">proc_type</span></span><span class="se" style="color: #d14;"><span class="idiff">\x18\n</span></span><span class="s" style="color: #d14;"><span class="idiff"> </span></span><span class="se" style="color: #d14;"><span class="idiff">\x01</span></span><span class="s" style="color: #d14;"><span class="idiff">(</span></span><span class="se" style="color: #d14;"><span class="idiff">\t\x12\x18\n\t</span></span><span class="s" style="color: #d14;"><span class="idiff">is_docker</span></span><span class="se" style="color: #d14;"><span class="idiff">\x18\x0b</span></span><span class="s" style="color: #d14;"><span class="idiff"> </span></span><span class="se" style="color: #d14;"><span class="idiff">\x01</span></span><span class="s" style="color: #d14;"><span class="idiff">(</span></span><span class="se" style="color: #d14;"><span class="idiff">\x08</span></span><span class="s" style="color: #d14;"><span class="idiff">:</span></span><span class="se" style="color: #d14;"><span class="idiff">\x05\x66\x61</span></span><span class="s" style="color: #d14;"><span class="idiff">lse</span></span><span class="se" style="color: #d14;"><span class="idiff">\x12</span></span><span class="s" style="color: #d14;"><span class="idiff">.</span></span><span class="se" style="color: #d14;"><span class="idiff">\n\x06\x64</span></span><span class="s" style="color: #d14;"><span class="idiff">ocker</span></span><span class="se" style="color: #d14;"><span class="idiff">\x18\x0c</span></span><span class="s" style="color: #d14;"><span class="idiff"> </span></span><span class="se" style="color: #d14;"><span class="idiff">\x01</span></span><span class="s" style="color: #d14;"><span class="idiff">(</span></span><span class="se" style="color: #d14;"><span class="idiff">\x0b\x32\x1e</span></span><span class="s" style="color: #d14;"><span class="idiff">.biomaj.process.Process.Docker</span></span><span class="se" style="color: #d14;"><span class="idiff">\x1a</span></span><span class="si" style="color: #d14;"><span class="idiff">%</span></span><span class="se" style="color: #d14;"><span class="idiff">\n\x06\x45</span></span><span class="s" style="color: #d14;"><span class="idiff">nvVar</span></span><span class="se" style="color: #d14;"><span class="idiff">\x12\x0c\n\x04</span></span><span class="s" style="color: #d14;"><span class="idiff">name</span></span><span class="se" style="color: #d14;"><span class="idiff">\x18\x01</span></span><span class="s" style="color: #d14;"><span class="idiff"> </span></span><span class="se" style="color: #d14;"><span class="idiff">\x02</span></span><span class="s" style="color: #d14;"><span class="idiff">(</span></span><span class="se" style="color: #d14;"><span class="idiff">\t\x12\r\n\x05</span></span><span class="s" style="color: #d14;"><span class="idiff">value</span></span><span class="se" style="color: #d14;"><span class="idiff">\x18\x02</span></span><span class="s" style="color: #d14;"><span class="idiff"> </span></span><span class="se" style="color: #d14;"><span class="idiff">\x02</span></span><span class="s" style="color: #d14;"><span class="idiff">(</span></span><span class="se" style="color: #d14;"><span class="idiff">\t\x1a\x30\n\x06\x44</span></span><span class="s" style="color: #d14;"><span class="idiff">ocker</span></span><span class="se" style="color: #d14;"><span class="idiff">\x12\r\n\x05</span></span><span class="s" style="color: #d14;"><span class="idiff">image</span></span><span class="se" style="color: #d14;"><span class="idiff">\x18\x01</span></span><span class="s" style="color: #d14;"><span class="idiff"> </span></span><span class="se" style="color: #d14;"><span class="idiff">\x02</span></span><span class="s" style="color: #d14;"><span class="idiff">(</span></span><span class="se" style="color: #d14;"><span class="idiff">\t\x12\x17\n\x08</span></span><span class="s" style="color: #d14;"><span class="idiff">use_sudo</span></span><span class="se" style="color: #d14;"><span class="idiff">\x18\x02</span></span><span class="s" style="color: #d14;"><span class="idiff"> </span></span><span class="se" style="color: #d14;"><span class="idiff">\x01</span></span><span class="s" style="color: #d14;"><span class="idiff">(</span></span><span class="se" style="color: #d14;"><span class="idiff">\x08</span></span><span class="s" style="color: #d14;"><span class="idiff">:</span></span><span class="se" style="color: #d14;"><span class="idiff">\x05\x66\x61</span></span><span class="s" style="color: #d14;"><span class="idiff">lse</span></span><span class="se" style="color: #d14;"><span class="idiff">\"\xe7\x01\n\t</span></span><span class="s" style="color: #d14;"><span class="idiff">Operation</span></span><span class="se" style="color: #d14;"><span class="idiff">\x12</span></span><span class="s" style="color: #d14;"><span class="idiff">(</span></span><span class="se" style="color: #d14;"><span class="idiff">\n\x07</span></span><span class="s" style="color: #d14;"><span class="idiff">process</span></span><span class="se" style="color: #d14;"><span class="idiff">\x18\x01</span></span><span class="s" style="color: #d14;"><span class="idiff"> </span></span><span class="se" style="color: #d14;"><span class="idiff">\x01</span></span><span class="s" style="color: #d14;"><span class="idiff">(</span></span><span class="se" style="color: #d14;"><span class="idiff">\x0b\x32\x17</span></span><span class="s" style="color: #d14;"><span class="idiff">.biomaj.process.Process</span></span><span class="se" style="color: #d14;"><span class="idiff">\x12</span></span><span class="s" style="color: #d14;"><span class="idiff">:</span></span><span class="se" style="color: #d14;"><span class="idiff">\n\x04</span></span><span class="s" style="color: #d14;"><span class="idiff">type</span></span><span class="se" style="color: #d14;"><span class="idiff">\x18\x02</span></span><span class="s" style="color: #d14;"><span class="idiff"> </span></span><span class="se" style="color: #d14;"><span class="idiff">\x02</span></span><span class="s" style="color: #d14;"><span class="idiff">(</span></span><span class="se" style="color: #d14;"><span class="idiff">\x0e\x32</span></span><span class="s" style="color: #d14;"><span class="idiff">#.biomaj.process.Operation.OPERATION:</span></span><span class="se" style="color: #d14;"><span class="idiff">\x07\x45</span></span><span class="s" style="color: #d14;"><span class="idiff">XECUTE</span></span><span class="se" style="color: #d14;"><span class="idiff">\x12</span></span><span class="s" style="color: #d14;"><span class="idiff">.</span></span><span class="se" style="color: #d14;"><span class="idiff">\n\x05</span></span><span class="s" style="color: #d14;"><span class="idiff">trace</span></span><span class="se" style="color: #d14;"><span class="idiff">\x18\x03</span></span><span class="s" style="color: #d14;"><span class="idiff"> </span></span><span class="se" style="color: #d14;"><span class="idiff">\x01</span></span><span class="s" style="color: #d14;"><span class="idiff">(</span></span><span class="se" style="color: #d14;"><span class="idiff">\x0b\x32\x1f</span></span><span class="s" style="color: #d14;"><span class="idiff right">.biomaj.process</span>.Operation.Trace</span><span class="se" style="color: #d14;">\x1a</span><span class="s" style="color: #d14;">*</span><span class="se" style="color: #d14;">\n\x05</span><span class="s" style="color: #d14;">Trace</span><span class="se" style="color: #d14;">\x12\x10\n\x08</span><span class="s" style="color: #d14;">trace_id</span><span class="se" style="color: #d14;">\x18\x01</span><span class="s" style="color: #d14;"> </span><span class="se" style="color: #d14;">\x02</span><span class="s" style="color: #d14;">(</span><span class="se" style="color: #d14;">\t\x12\x0f\n\x07</span><span class="s" style="color: #d14;">span_id</span><span class="se" style="color: #d14;">\x18\x02</span><span class="s" style="color: #d14;"> </span><span class="se" style="color: #d14;">\x02</span><span class="s" style="color: #d14;">(</span><span class="se" style="color: #d14;">\t\"\x18\n\t</span><span class="s" style="color: #d14;">OPERATION</span><span class="se" style="color: #d14;">\x12\x0b\n\x07\x45</span><span class="s" style="color: #d14;">XECUTE</span><span class="se" style="color: #d14;">\x10\x01</span><span class="s" style="color: #d14;">'</span><span class="p">)</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="22" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="22" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC22" class="line" lang="python"><span class="p">)</span></span>

</pre>

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<td class="diff-line-num new_line" data-linenumber="23" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC23" class="line" lang="python"><span class="n" style="color: #333;">_sym_db</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">RegisterFileDescriptor</span><span class="p">(</span><span class="n" style="color: #333;">DESCRIPTOR</span><span class="p">)</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="24" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="24" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC24" class="line" lang="python"></span>

</pre>

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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="26" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="diff-line-num unfold js-unfold new_line" data-linenumber="26" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -26,7 +26,7 @@ _sym_db.RegisterFileDescriptor(DESCRIPTOR)</td>

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<td class="diff-line-num old_line" data-linenumber="26" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="26" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC26" class="line" lang="python"></span>

</pre>

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<pre style="margin: 0;"> <span id="LC27" class="line" lang="python"><span class="n" style="color: #333;">_OPERATION_OPERATION</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">_descriptor</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">EnumDescriptor</span><span class="p">(</span></span>

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<pre style="margin: 0;"> <span id="LC28" class="line" lang="python">  <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'OPERATION'</span><span class="p">,</span></span>

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<pre style="margin: 0;">-<span id="LC29" class="line" lang="python">  <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.Operation.OPERATION'</span><span class="p">,</span></span>

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<td class="diff-line-num new old_line" data-linenumber="30" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="diff-line-num new new_line" data-linenumber="29" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC29" class="line" lang="python">  <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.<span class="idiff left right">process.</span>Operation.OPERATION'</span><span class="p">,</span></span>

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<pre style="margin: 0;"> <span id="LC30" class="line" lang="python">  <span class="n" style="color: #333;">filename</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

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<pre style="margin: 0;"> <span id="LC31" class="line" lang="python">  <span class="nb" style="color: #0086b3;">file</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">DESCRIPTOR</span><span class="p">,</span></span>

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<pre style="margin: 0;"> <span id="LC32" class="line" lang="python">  <span class="n" style="color: #333;">values</span><span class="o" style="font-weight: 600;">=</span><span class="p">[</span></span>

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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="37" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="diff-line-num unfold js-unfold new_line" data-linenumber="37" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -37,28 +37,28 @@ _OPERATION_OPERATION = _descriptor.EnumDescriptor(</td>

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<pre style="margin: 0;"> <span id="LC37" class="line" lang="python">  <span class="p">],</span></span>

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<pre style="margin: 0;"> <span id="LC38" class="line" lang="python">  <span class="n" style="color: #333;">containing_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

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<pre style="margin: 0;"> <span id="LC39" class="line" lang="python">  <span class="n" style="color: #333;">options</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

</pre>

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<pre style="margin: 0;">-<span id="LC40" class="line" lang="python">  <span class="n" style="color: #333;">serialized_start</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;"><span class="idiff left right">576</span></span><span class="p">,</span></span>

</pre>

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<pre style="margin: 0;">-<span id="LC41" class="line" lang="python">  <span class="n" style="color: #333;">serialized_end</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">6<span class="idiff left right">00</span></span><span class="p">,</span></span>

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<pre style="margin: 0;">+<span id="LC40" class="line" lang="python">  <span class="n" style="color: #333;">serialized_start</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;"><span class="idiff left right">628</span></span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="42" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC41" class="line" lang="python">  <span class="n" style="color: #333;">serialized_end</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">6<span class="idiff left right">52</span></span><span class="p">,</span></span>

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<pre style="margin: 0;"> <span id="LC42" class="line" lang="python"><span class="p">)</span></span>

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<td class="diff-line-num old_line" data-linenumber="43" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC43" class="line" lang="python"><span class="n" style="color: #333;">_sym_db</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">RegisterEnumDescriptor</span><span class="p">(</span><span class="n" style="color: #333;">_OPERATION_OPERATION</span><span class="p">)</span></span>

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<td class="diff-line-num old_line" data-linenumber="44" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC44" class="line" lang="python"></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="45" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC45" class="line" lang="python"></span>

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<pre style="margin: 0;"> <span id="LC46" class="line" lang="python"><span class="n" style="color: #333;">_PROCESS_ENVVAR</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">_descriptor</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">Descriptor</span><span class="p">(</span></span>

</pre>

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<pre style="margin: 0;"> <span id="LC47" class="line" lang="python">  <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'EnvVar'</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old old_line" data-linenumber="48" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<td class="diff-line-num new_line old" data-linenumber="48" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<pre style="margin: 0;">-<span id="LC48" class="line" lang="python">  <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.Process.EnvVar'</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="49" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="diff-line-num new new_line" data-linenumber="48" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC48" class="line" lang="python">  <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.<span class="idiff left right">process.</span>Process.EnvVar'</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="49" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC49" class="line" lang="python">  <span class="n" style="color: #333;">filename</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="50" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="50" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC50" class="line" lang="python">  <span class="nb" style="color: #0086b3;">file</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">DESCRIPTOR</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="51" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="51" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC51" class="line" lang="python">  <span class="n" style="color: #333;">containing_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="52" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="52" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC52" class="line" lang="python">  <span class="n" style="color: #333;">fields</span><span class="o" style="font-weight: 600;">=</span><span class="p">[</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="53" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="53" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC53" class="line" lang="python">    <span class="n" style="color: #333;">_descriptor</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">FieldDescriptor</span><span class="p">(</span></span>

</pre>

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<td class="diff-line-num old old_line" data-linenumber="54" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<td class="diff-line-num new_line old" data-linenumber="54" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<pre style="margin: 0;">-<span id="LC54" class="line" lang="python">      <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'name'</span><span class="p">,</span> <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.Process.EnvVar.name'</span><span class="p">,</span> <span class="n" style="color: #333;">index</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">0</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="55" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="diff-line-num new new_line" data-linenumber="54" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC54" class="line" lang="python">      <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'name'</span><span class="p">,</span> <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.<span class="idiff left right">process.</span>Process.EnvVar.name'</span><span class="p">,</span> <span class="n" style="color: #333;">index</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">0</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="55" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="55" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC55" class="line" lang="python">      <span class="n" style="color: #333;">number</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">1</span><span class="p">,</span> <span class="nb" style="color: #0086b3;">type</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">9</span><span class="p">,</span> <span class="n" style="color: #333;">cpp_type</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">9</span><span class="p">,</span> <span class="n" style="color: #333;">label</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">2</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="56" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="56" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC56" class="line" lang="python">      <span class="n" style="color: #333;">has_default_value</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">False</span><span class="p">,</span> <span class="n" style="color: #333;">default_value</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">_b</span><span class="p">(</span><span class="s" style="color: #d14;">""</span><span class="p">)</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">decode</span><span class="p">(</span><span class="s" style="color: #d14;">'utf-8'</span><span class="p">),</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="57" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="57" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC57" class="line" lang="python">      <span class="n" style="color: #333;">message_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span> <span class="n" style="color: #333;">enum_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span> <span class="n" style="color: #333;">containing_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="58" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="58" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC58" class="line" lang="python">      <span class="n" style="color: #333;">is_extension</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">False</span><span class="p">,</span> <span class="n" style="color: #333;">extension_scope</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="59" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="59" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC59" class="line" lang="python">      <span class="n" style="color: #333;">options</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">),</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="60" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="60" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC60" class="line" lang="python">    <span class="n" style="color: #333;">_descriptor</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">FieldDescriptor</span><span class="p">(</span></span>

</pre>

</td>

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<td class="diff-line-num old old_line" data-linenumber="61" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<pre style="margin: 0;">-<span id="LC61" class="line" lang="python">      <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'value'</span><span class="p">,</span> <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.Process.EnvVar.value'</span><span class="p">,</span> <span class="n" style="color: #333;">index</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">1</span><span class="p">,</span></span>

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<pre style="margin: 0;">+<span id="LC61" class="line" lang="python">      <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'value'</span><span class="p">,</span> <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.<span class="idiff left right">process.</span>Process.EnvVar.value'</span><span class="p">,</span> <span class="n" style="color: #333;">index</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">1</span><span class="p">,</span></span>

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<pre style="margin: 0;"> <span id="LC62" class="line" lang="python">      <span class="n" style="color: #333;">number</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">2</span><span class="p">,</span> <span class="nb" style="color: #0086b3;">type</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">9</span><span class="p">,</span> <span class="n" style="color: #333;">cpp_type</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">9</span><span class="p">,</span> <span class="n" style="color: #333;">label</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">2</span><span class="p">,</span></span>

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<pre style="margin: 0;"> <span id="LC63" class="line" lang="python">      <span class="n" style="color: #333;">has_default_value</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">False</span><span class="p">,</span> <span class="n" style="color: #333;">default_value</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">_b</span><span class="p">(</span><span class="s" style="color: #d14;">""</span><span class="p">)</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">decode</span><span class="p">(</span><span class="s" style="color: #d14;">'utf-8'</span><span class="p">),</span></span>

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<pre style="margin: 0;"> <span id="LC64" class="line" lang="python">      <span class="n" style="color: #333;">message_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span> <span class="n" style="color: #333;">enum_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span> <span class="n" style="color: #333;">containing_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="75" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -75,26 +75,26 @@ _PROCESS_ENVVAR = _descriptor.Descriptor(</td>

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<pre style="margin: 0;"> <span id="LC75" class="line" lang="python">  <span class="n" style="color: #333;">extension_ranges</span><span class="o" style="font-weight: 600;">=</span><span class="p">[],</span></span>

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<pre style="margin: 0;"> <span id="LC76" class="line" lang="python">  <span class="n" style="color: #333;">oneofs</span><span class="o" style="font-weight: 600;">=</span><span class="p">[</span></span>

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<pre style="margin: 0;"> <span id="LC77" class="line" lang="python">  <span class="p">],</span></span>

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<pre style="margin: 0;">-<span id="LC78" class="line" lang="python">  <span class="n" style="color: #333;">serialized_start</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">3<span class="idiff left right">03</span></span><span class="p">,</span></span>

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<pre style="margin: 0;">-<span id="LC79" class="line" lang="python">  <span class="n" style="color: #333;">serialized_end</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">3<span class="idiff left right">40</span></span><span class="p">,</span></span>

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<pre style="margin: 0;">+<span id="LC78" class="line" lang="python">  <span class="n" style="color: #333;">serialized_start</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">3<span class="idiff left right">31</span></span><span class="p">,</span></span>

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<pre style="margin: 0;">+<span id="LC79" class="line" lang="python">  <span class="n" style="color: #333;">serialized_end</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">3<span class="idiff left right">68</span></span><span class="p">,</span></span>

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<pre style="margin: 0;"> <span id="LC80" class="line" lang="python"><span class="p">)</span></span>

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<pre style="margin: 0;"> <span id="LC81" class="line" lang="python"></span>

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<pre style="margin: 0;"> <span id="LC82" class="line" lang="python"><span class="n" style="color: #333;">_PROCESS_DOCKER</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">_descriptor</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">Descriptor</span><span class="p">(</span></span>

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<pre style="margin: 0;"> <span id="LC83" class="line" lang="python">  <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'Docker'</span><span class="p">,</span></span>

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<pre style="margin: 0;">-<span id="LC84" class="line" lang="python">  <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.Process.Docker'</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="85" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="84" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="line_content new noteable_line" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">

<pre style="margin: 0;">+<span id="LC84" class="line" lang="python">  <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.<span class="idiff left right">process.</span>Process.Docker'</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="85" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="85" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC85" class="line" lang="python">  <span class="n" style="color: #333;">filename</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="86" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="86" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC86" class="line" lang="python">  <span class="nb" style="color: #0086b3;">file</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">DESCRIPTOR</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="87" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="87" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC87" class="line" lang="python">  <span class="n" style="color: #333;">containing_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="88" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="88" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC88" class="line" lang="python">  <span class="n" style="color: #333;">fields</span><span class="o" style="font-weight: 600;">=</span><span class="p">[</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="89" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="89" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC89" class="line" lang="python">    <span class="n" style="color: #333;">_descriptor</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">FieldDescriptor</span><span class="p">(</span></span>

</pre>

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<td class="diff-line-num old old_line" data-linenumber="90" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<td class="diff-line-num new_line old" data-linenumber="90" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<pre style="margin: 0;">-<span id="LC90" class="line" lang="python">      <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'image'</span><span class="p">,</span> <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.Process.Docker.image'</span><span class="p">,</span> <span class="n" style="color: #333;">index</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">0</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="91" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="diff-line-num new new_line" data-linenumber="90" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC90" class="line" lang="python">      <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'image'</span><span class="p">,</span> <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.<span class="idiff left right">process.</span>Process.Docker.image'</span><span class="p">,</span> <span class="n" style="color: #333;">index</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">0</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="91" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="91" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC91" class="line" lang="python">      <span class="n" style="color: #333;">number</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">1</span><span class="p">,</span> <span class="nb" style="color: #0086b3;">type</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">9</span><span class="p">,</span> <span class="n" style="color: #333;">cpp_type</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">9</span><span class="p">,</span> <span class="n" style="color: #333;">label</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">2</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="92" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="92" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC92" class="line" lang="python">      <span class="n" style="color: #333;">has_default_value</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">False</span><span class="p">,</span> <span class="n" style="color: #333;">default_value</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">_b</span><span class="p">(</span><span class="s" style="color: #d14;">""</span><span class="p">)</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">decode</span><span class="p">(</span><span class="s" style="color: #d14;">'utf-8'</span><span class="p">),</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="93" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="93" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC93" class="line" lang="python">      <span class="n" style="color: #333;">message_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span> <span class="n" style="color: #333;">enum_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span> <span class="n" style="color: #333;">containing_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="94" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="94" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC94" class="line" lang="python">      <span class="n" style="color: #333;">is_extension</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">False</span><span class="p">,</span> <span class="n" style="color: #333;">extension_scope</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="95" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="95" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC95" class="line" lang="python">      <span class="n" style="color: #333;">options</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">),</span></span>

</pre>

</td>

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<td class="diff-line-num old_line" data-linenumber="96" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="96" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC96" class="line" lang="python">    <span class="n" style="color: #333;">_descriptor</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">FieldDescriptor</span><span class="p">(</span></span>

</pre>

</td>

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<td class="diff-line-num old old_line" data-linenumber="97" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<td class="diff-line-num new_line old" data-linenumber="97" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<td class="line_content noteable_line old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">

<pre style="margin: 0;">-<span id="LC97" class="line" lang="python">      <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'use_sudo'</span><span class="p">,</span> <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.Process.Docker.use_sudo'</span><span class="p">,</span> <span class="n" style="color: #333;">index</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">1</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="98" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="97" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC97" class="line" lang="python">      <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'use_sudo'</span><span class="p">,</span> <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.<span class="idiff left right">process.</span>Process.Docker.use_sudo'</span><span class="p">,</span> <span class="n" style="color: #333;">index</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">1</span><span class="p">,</span></span>

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<pre style="margin: 0;"> <span id="LC98" class="line" lang="python">      <span class="n" style="color: #333;">number</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">2</span><span class="p">,</span> <span class="nb" style="color: #0086b3;">type</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">8</span><span class="p">,</span> <span class="n" style="color: #333;">cpp_type</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">7</span><span class="p">,</span> <span class="n" style="color: #333;">label</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">1</span><span class="p">,</span></span>

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<pre style="margin: 0;"> <span id="LC99" class="line" lang="python">      <span class="n" style="color: #333;">has_default_value</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">True</span><span class="p">,</span> <span class="n" style="color: #333;">default_value</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">False</span><span class="p">,</span></span>

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<pre style="margin: 0;"> <span id="LC100" class="line" lang="python">      <span class="n" style="color: #333;">message_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span> <span class="n" style="color: #333;">enum_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span> <span class="n" style="color: #333;">containing_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="111" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="diff-line-num unfold js-unfold new_line" data-linenumber="111" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -111,96 +111,96 @@ _PROCESS_DOCKER = _descriptor.Descriptor(</td>

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<pre style="margin: 0;"> <span id="LC111" class="line" lang="python">  <span class="n" style="color: #333;">extension_ranges</span><span class="o" style="font-weight: 600;">=</span><span class="p">[],</span></span>

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<pre style="margin: 0;"> <span id="LC112" class="line" lang="python">  <span class="n" style="color: #333;">oneofs</span><span class="o" style="font-weight: 600;">=</span><span class="p">[</span></span>

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<pre style="margin: 0;"> <span id="LC113" class="line" lang="python">  <span class="p">],</span></span>

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<pre style="margin: 0;">-<span id="LC114" class="line" lang="python">  <span class="n" style="color: #333;">serialized_start</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">3<span class="idiff left right">42</span></span><span class="p">,</span></span>

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<pre style="margin: 0;">-<span id="LC115" class="line" lang="python">  <span class="n" style="color: #333;">serialized_end</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;"><span class="idiff left right">390</span></span><span class="p">,</span></span>

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<pre style="margin: 0;">+<span id="LC114" class="line" lang="python">  <span class="n" style="color: #333;">serialized_start</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">3<span class="idiff left right">70</span></span><span class="p">,</span></span>

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<td class="diff-line-num new old_line" data-linenumber="116" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC115" class="line" lang="python">  <span class="n" style="color: #333;">serialized_end</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;"><span class="idiff left right">418</span></span><span class="p">,</span></span>

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<pre style="margin: 0;"> <span id="LC116" class="line" lang="python"><span class="p">)</span></span>

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<pre style="margin: 0;"> <span id="LC117" class="line" lang="python"></span>

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<pre style="margin: 0;"> <span id="LC118" class="line" lang="python"><span class="n" style="color: #333;">_PROCESS</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">_descriptor</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">Descriptor</span><span class="p">(</span></span>

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<pre style="margin: 0;"> <span id="LC119" class="line" lang="python">  <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'Process'</span><span class="p">,</span></span>

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<td class="diff-line-num old old_line" data-linenumber="120" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<pre style="margin: 0;">-<span id="LC120" class="line" lang="python">  <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.Process'</span><span class="p">,</span></span>

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<td class="diff-line-num new old_line" data-linenumber="121" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC120" class="line" lang="python">  <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.<span class="idiff left right">process.</span>Process'</span><span class="p">,</span></span>

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<pre style="margin: 0;"> <span id="LC121" class="line" lang="python">  <span class="n" style="color: #333;">filename</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="122" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

122

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122

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<pre style="margin: 0;"> <span id="LC122" class="line" lang="python">  <span class="nb" style="color: #0086b3;">file</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">DESCRIPTOR</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="123" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="123" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC123" class="line" lang="python">  <span class="n" style="color: #333;">containing_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="124" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="124" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC124" class="line" lang="python">  <span class="n" style="color: #333;">fields</span><span class="o" style="font-weight: 600;">=</span><span class="p">[</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="125" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="125" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC125" class="line" lang="python">    <span class="n" style="color: #333;">_descriptor</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">FieldDescriptor</span><span class="p">(</span></span>

</pre>

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<td class="diff-line-num old old_line" data-linenumber="126" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<td class="diff-line-num new_line old" data-linenumber="126" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<pre style="margin: 0;">-<span id="LC126" class="line" lang="python">      <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'bank'</span><span class="p">,</span> <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.Process.bank'</span><span class="p">,</span> <span class="n" style="color: #333;">index</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">0</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="127" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="diff-line-num new new_line" data-linenumber="126" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC126" class="line" lang="python">      <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'bank'</span><span class="p">,</span> <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.<span class="idiff left right">process.</span>Process.bank'</span><span class="p">,</span> <span class="n" style="color: #333;">index</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">0</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="127" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="127" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC127" class="line" lang="python">      <span class="n" style="color: #333;">number</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">1</span><span class="p">,</span> <span class="nb" style="color: #0086b3;">type</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">9</span><span class="p">,</span> <span class="n" style="color: #333;">cpp_type</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">9</span><span class="p">,</span> <span class="n" style="color: #333;">label</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">2</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="128" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="128" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC128" class="line" lang="python">      <span class="n" style="color: #333;">has_default_value</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">False</span><span class="p">,</span> <span class="n" style="color: #333;">default_value</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">_b</span><span class="p">(</span><span class="s" style="color: #d14;">""</span><span class="p">)</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">decode</span><span class="p">(</span><span class="s" style="color: #d14;">'utf-8'</span><span class="p">),</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="129" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="129" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC129" class="line" lang="python">      <span class="n" style="color: #333;">message_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span> <span class="n" style="color: #333;">enum_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span> <span class="n" style="color: #333;">containing_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="130" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="130" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC130" class="line" lang="python">      <span class="n" style="color: #333;">is_extension</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">False</span><span class="p">,</span> <span class="n" style="color: #333;">extension_scope</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="131" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="131" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC131" class="line" lang="python">      <span class="n" style="color: #333;">options</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">),</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="132" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="132" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC132" class="line" lang="python">    <span class="n" style="color: #333;">_descriptor</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">FieldDescriptor</span><span class="p">(</span></span>

</pre>

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<td class="diff-line-num old old_line" data-linenumber="133" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<td class="diff-line-num new_line old" data-linenumber="133" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<td class="line_content noteable_line old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">

<pre style="margin: 0;">-<span id="LC133" class="line" lang="python">      <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'session'</span><span class="p">,</span> <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.Process.session'</span><span class="p">,</span> <span class="n" style="color: #333;">index</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">1</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="134" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="133" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC133" class="line" lang="python">      <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'session'</span><span class="p">,</span> <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.<span class="idiff left right">process.</span>Process.session'</span><span class="p">,</span> <span class="n" style="color: #333;">index</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">1</span><span class="p">,</span></span>

</pre>

</td>

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<td class="diff-line-num old_line" data-linenumber="134" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="134" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC134" class="line" lang="python">      <span class="n" style="color: #333;">number</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">2</span><span class="p">,</span> <span class="nb" style="color: #0086b3;">type</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">9</span><span class="p">,</span> <span class="n" style="color: #333;">cpp_type</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">9</span><span class="p">,</span> <span class="n" style="color: #333;">label</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">2</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="135" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="135" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC135" class="line" lang="python">      <span class="n" style="color: #333;">has_default_value</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">False</span><span class="p">,</span> <span class="n" style="color: #333;">default_value</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">_b</span><span class="p">(</span><span class="s" style="color: #d14;">""</span><span class="p">)</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">decode</span><span class="p">(</span><span class="s" style="color: #d14;">'utf-8'</span><span class="p">),</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="136" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

136

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<td class="diff-line-num new_line" data-linenumber="136" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC136" class="line" lang="python">      <span class="n" style="color: #333;">message_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span> <span class="n" style="color: #333;">enum_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span> <span class="n" style="color: #333;">containing_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="137" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="137" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC137" class="line" lang="python">      <span class="n" style="color: #333;">is_extension</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">False</span><span class="p">,</span> <span class="n" style="color: #333;">extension_scope</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="138" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="138" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC138" class="line" lang="python">      <span class="n" style="color: #333;">options</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">),</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="139" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="139" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC139" class="line" lang="python">    <span class="n" style="color: #333;">_descriptor</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">FieldDescriptor</span><span class="p">(</span></span>

</pre>

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<td class="diff-line-num old old_line" data-linenumber="140" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<td class="diff-line-num new_line old" data-linenumber="140" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<pre style="margin: 0;">-<span id="LC140" class="line" lang="python">      <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'log_dir'</span><span class="p">,</span> <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.Process.log_dir'</span><span class="p">,</span> <span class="n" style="color: #333;">index</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">2</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="141" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="diff-line-num new new_line" data-linenumber="140" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC140" class="line" lang="python">      <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'log_dir'</span><span class="p">,</span> <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.<span class="idiff left right">process.</span>Process.log_dir'</span><span class="p">,</span> <span class="n" style="color: #333;">index</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">2</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="141" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="141" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC141" class="line" lang="python">      <span class="n" style="color: #333;">number</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">3</span><span class="p">,</span> <span class="nb" style="color: #0086b3;">type</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">9</span><span class="p">,</span> <span class="n" style="color: #333;">cpp_type</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">9</span><span class="p">,</span> <span class="n" style="color: #333;">label</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">2</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="142" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="142" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC142" class="line" lang="python">      <span class="n" style="color: #333;">has_default_value</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">False</span><span class="p">,</span> <span class="n" style="color: #333;">default_value</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">_b</span><span class="p">(</span><span class="s" style="color: #d14;">""</span><span class="p">)</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">decode</span><span class="p">(</span><span class="s" style="color: #d14;">'utf-8'</span><span class="p">),</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="143" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="143" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC143" class="line" lang="python">      <span class="n" style="color: #333;">message_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span> <span class="n" style="color: #333;">enum_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span> <span class="n" style="color: #333;">containing_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="144" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="144" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC144" class="line" lang="python">      <span class="n" style="color: #333;">is_extension</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">False</span><span class="p">,</span> <span class="n" style="color: #333;">extension_scope</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="145" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="145" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC145" class="line" lang="python">      <span class="n" style="color: #333;">options</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">),</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="146" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="146" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC146" class="line" lang="python">    <span class="n" style="color: #333;">_descriptor</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">FieldDescriptor</span><span class="p">(</span></span>

</pre>

</td>

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<td class="diff-line-num old old_line" data-linenumber="147" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<td class="diff-line-num new_line old" data-linenumber="147" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<td class="line_content noteable_line old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">

<pre style="margin: 0;">-<span id="LC147" class="line" lang="python">      <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'exe'</span><span class="p">,</span> <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.Process.exe'</span><span class="p">,</span> <span class="n" style="color: #333;">index</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">3</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="148" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="diff-line-num new new_line" data-linenumber="147" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC147" class="line" lang="python">      <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'exe'</span><span class="p">,</span> <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.<span class="idiff left right">process.</span>Process.exe'</span><span class="p">,</span> <span class="n" style="color: #333;">index</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">3</span><span class="p">,</span></span>

</pre>

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<pre style="margin: 0;"> <span id="LC148" class="line" lang="python">      <span class="n" style="color: #333;">number</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">4</span><span class="p">,</span> <span class="nb" style="color: #0086b3;">type</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">9</span><span class="p">,</span> <span class="n" style="color: #333;">cpp_type</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">9</span><span class="p">,</span> <span class="n" style="color: #333;">label</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">2</span><span class="p">,</span></span>

</pre>

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<pre style="margin: 0;"> <span id="LC149" class="line" lang="python">      <span class="n" style="color: #333;">has_default_value</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">False</span><span class="p">,</span> <span class="n" style="color: #333;">default_value</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">_b</span><span class="p">(</span><span class="s" style="color: #d14;">""</span><span class="p">)</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">decode</span><span class="p">(</span><span class="s" style="color: #d14;">'utf-8'</span><span class="p">),</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="150" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC150" class="line" lang="python">      <span class="n" style="color: #333;">message_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span> <span class="n" style="color: #333;">enum_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span> <span class="n" style="color: #333;">containing_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="151" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC151" class="line" lang="python">      <span class="n" style="color: #333;">is_extension</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">False</span><span class="p">,</span> <span class="n" style="color: #333;">extension_scope</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="152" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="152" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC152" class="line" lang="python">      <span class="n" style="color: #333;">options</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">),</span></span>

</pre>

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<td class="diff-line-num new_line" data-linenumber="153" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC153" class="line" lang="python">    <span class="n" style="color: #333;">_descriptor</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">FieldDescriptor</span><span class="p">(</span></span>

</pre>

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<td class="diff-line-num new_line old" data-linenumber="154" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<pre style="margin: 0;">-<span id="LC154" class="line" lang="python">      <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'args'</span><span class="p">,</span> <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.Process.args'</span><span class="p">,</span> <span class="n" style="color: #333;">index</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">4</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="154" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC154" class="line" lang="python">      <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'args'</span><span class="p">,</span> <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.<span class="idiff left right">process.</span>Process.args'</span><span class="p">,</span> <span class="n" style="color: #333;">index</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">4</span><span class="p">,</span></span>

</pre>

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<pre style="margin: 0;"> <span id="LC155" class="line" lang="python">      <span class="n" style="color: #333;">number</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">5</span><span class="p">,</span> <span class="nb" style="color: #0086b3;">type</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">9</span><span class="p">,</span> <span class="n" style="color: #333;">cpp_type</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">9</span><span class="p">,</span> <span class="n" style="color: #333;">label</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">3</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="156" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="156" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC156" class="line" lang="python">      <span class="n" style="color: #333;">has_default_value</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">False</span><span class="p">,</span> <span class="n" style="color: #333;">default_value</span><span class="o" style="font-weight: 600;">=</span><span class="p">[],</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="157" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="157" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC157" class="line" lang="python">      <span class="n" style="color: #333;">message_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span> <span class="n" style="color: #333;">enum_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span> <span class="n" style="color: #333;">containing_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="158" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="158" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC158" class="line" lang="python">      <span class="n" style="color: #333;">is_extension</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">False</span><span class="p">,</span> <span class="n" style="color: #333;">extension_scope</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="159" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="159" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC159" class="line" lang="python">      <span class="n" style="color: #333;">options</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">),</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="160" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="160" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC160" class="line" lang="python">    <span class="n" style="color: #333;">_descriptor</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">FieldDescriptor</span><span class="p">(</span></span>

</pre>

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<td class="diff-line-num old old_line" data-linenumber="161" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<td class="diff-line-num new_line old" data-linenumber="161" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<td class="line_content noteable_line old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">

<pre style="margin: 0;">-<span id="LC161" class="line" lang="python">      <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'env_vars'</span><span class="p">,</span> <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.Process.env_vars'</span><span class="p">,</span> <span class="n" style="color: #333;">index</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">5</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="162" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="diff-line-num new new_line" data-linenumber="161" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC161" class="line" lang="python">      <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'env_vars'</span><span class="p">,</span> <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.<span class="idiff left right">process.</span>Process.env_vars'</span><span class="p">,</span> <span class="n" style="color: #333;">index</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">5</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="162" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="162" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC162" class="line" lang="python">      <span class="n" style="color: #333;">number</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">6</span><span class="p">,</span> <span class="nb" style="color: #0086b3;">type</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">11</span><span class="p">,</span> <span class="n" style="color: #333;">cpp_type</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">10</span><span class="p">,</span> <span class="n" style="color: #333;">label</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">3</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="163" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

163

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<td class="diff-line-num new_line" data-linenumber="163" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC163" class="line" lang="python">      <span class="n" style="color: #333;">has_default_value</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">False</span><span class="p">,</span> <span class="n" style="color: #333;">default_value</span><span class="o" style="font-weight: 600;">=</span><span class="p">[],</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="164" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

164

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<td class="diff-line-num new_line" data-linenumber="164" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC164" class="line" lang="python">      <span class="n" style="color: #333;">message_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span> <span class="n" style="color: #333;">enum_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span> <span class="n" style="color: #333;">containing_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="165" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="165" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC165" class="line" lang="python">      <span class="n" style="color: #333;">is_extension</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">False</span><span class="p">,</span> <span class="n" style="color: #333;">extension_scope</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="166" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="166" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC166" class="line" lang="python">      <span class="n" style="color: #333;">options</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">),</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="167" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC167" class="line" lang="python">    <span class="n" style="color: #333;">_descriptor</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">FieldDescriptor</span><span class="p">(</span></span>

</pre>

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<pre style="margin: 0;">-<span id="LC168" class="line" lang="python">      <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'shell_expand'</span><span class="p">,</span> <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.Process.shell_expand'</span><span class="p">,</span> <span class="n" style="color: #333;">index</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">6</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="169" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="diff-line-num new new_line" data-linenumber="168" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC168" class="line" lang="python">      <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'shell_expand'</span><span class="p">,</span> <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.<span class="idiff left right">process.</span>Process.shell_expand'</span><span class="p">,</span> <span class="n" style="color: #333;">index</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">6</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="169" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC169" class="line" lang="python">      <span class="n" style="color: #333;">number</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">7</span><span class="p">,</span> <span class="nb" style="color: #0086b3;">type</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">8</span><span class="p">,</span> <span class="n" style="color: #333;">cpp_type</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">7</span><span class="p">,</span> <span class="n" style="color: #333;">label</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">1</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="170" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="170" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC170" class="line" lang="python">      <span class="n" style="color: #333;">has_default_value</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">True</span><span class="p">,</span> <span class="n" style="color: #333;">default_value</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">False</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="171" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="171" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC171" class="line" lang="python">      <span class="n" style="color: #333;">message_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span> <span class="n" style="color: #333;">enum_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span> <span class="n" style="color: #333;">containing_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num new_line" data-linenumber="172" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC172" class="line" lang="python">      <span class="n" style="color: #333;">is_extension</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">False</span><span class="p">,</span> <span class="n" style="color: #333;">extension_scope</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="173" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="173" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC173" class="line" lang="python">      <span class="n" style="color: #333;">options</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">),</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="174" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="174" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC174" class="line" lang="python">    <span class="n" style="color: #333;">_descriptor</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">FieldDescriptor</span><span class="p">(</span></span>

</pre>

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<pre style="margin: 0;">-<span id="LC175" class="line" lang="python">      <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'name'</span><span class="p">,</span> <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.Process.name'</span><span class="p">,</span> <span class="n" style="color: #333;">index</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">7</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="175" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC175" class="line" lang="python">      <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'name'</span><span class="p">,</span> <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.<span class="idiff left right">process.</span>Process.name'</span><span class="p">,</span> <span class="n" style="color: #333;">index</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">7</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="176" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

176

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<td class="diff-line-num new_line" data-linenumber="176" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC176" class="line" lang="python">      <span class="n" style="color: #333;">number</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">8</span><span class="p">,</span> <span class="nb" style="color: #0086b3;">type</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">9</span><span class="p">,</span> <span class="n" style="color: #333;">cpp_type</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">9</span><span class="p">,</span> <span class="n" style="color: #333;">label</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">1</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="177" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

177

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<td class="diff-line-num new_line" data-linenumber="177" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC177" class="line" lang="python">      <span class="n" style="color: #333;">has_default_value</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">False</span><span class="p">,</span> <span class="n" style="color: #333;">default_value</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">_b</span><span class="p">(</span><span class="s" style="color: #d14;">""</span><span class="p">)</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">decode</span><span class="p">(</span><span class="s" style="color: #d14;">'utf-8'</span><span class="p">),</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="178" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

178

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<td class="diff-line-num new_line" data-linenumber="178" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC178" class="line" lang="python">      <span class="n" style="color: #333;">message_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span> <span class="n" style="color: #333;">enum_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span> <span class="n" style="color: #333;">containing_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="179" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="179" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC179" class="line" lang="python">      <span class="n" style="color: #333;">is_extension</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">False</span><span class="p">,</span> <span class="n" style="color: #333;">extension_scope</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="180" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="180" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC180" class="line" lang="python">      <span class="n" style="color: #333;">options</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">),</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="181" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="181" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC181" class="line" lang="python">    <span class="n" style="color: #333;">_descriptor</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">FieldDescriptor</span><span class="p">(</span></span>

</pre>

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<td class="diff-line-num new_line old" data-linenumber="182" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<pre style="margin: 0;">-<span id="LC182" class="line" lang="python">      <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'description'</span><span class="p">,</span> <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.Process.description'</span><span class="p">,</span> <span class="n" style="color: #333;">index</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">8</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="182" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC182" class="line" lang="python">      <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'description'</span><span class="p">,</span> <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.<span class="idiff left right">process.</span>Process.description'</span><span class="p">,</span> <span class="n" style="color: #333;">index</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">8</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num new_line" data-linenumber="183" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC183" class="line" lang="python">      <span class="n" style="color: #333;">number</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">9</span><span class="p">,</span> <span class="nb" style="color: #0086b3;">type</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">9</span><span class="p">,</span> <span class="n" style="color: #333;">cpp_type</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">9</span><span class="p">,</span> <span class="n" style="color: #333;">label</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">1</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num new_line" data-linenumber="184" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC184" class="line" lang="python">      <span class="n" style="color: #333;">has_default_value</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">False</span><span class="p">,</span> <span class="n" style="color: #333;">default_value</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">_b</span><span class="p">(</span><span class="s" style="color: #d14;">""</span><span class="p">)</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">decode</span><span class="p">(</span><span class="s" style="color: #d14;">'utf-8'</span><span class="p">),</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="185" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="185" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC185" class="line" lang="python">      <span class="n" style="color: #333;">message_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span> <span class="n" style="color: #333;">enum_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span> <span class="n" style="color: #333;">containing_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="186" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="186" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC186" class="line" lang="python">      <span class="n" style="color: #333;">is_extension</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">False</span><span class="p">,</span> <span class="n" style="color: #333;">extension_scope</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="187" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="187" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC187" class="line" lang="python">      <span class="n" style="color: #333;">options</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">),</span></span>

</pre>

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<pre style="margin: 0;"> <span id="LC188" class="line" lang="python">    <span class="n" style="color: #333;">_descriptor</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">FieldDescriptor</span><span class="p">(</span></span>

</pre>

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<td class="diff-line-num old old_line" data-linenumber="189" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

189

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<td class="diff-line-num new_line old" data-linenumber="189" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<pre style="margin: 0;">-<span id="LC189" class="line" lang="python">      <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'proc_type'</span><span class="p">,</span> <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.Process.proc_type'</span><span class="p">,</span> <span class="n" style="color: #333;">index</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">9</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="190" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="diff-line-num new new_line" data-linenumber="189" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC189" class="line" lang="python">      <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'proc_type'</span><span class="p">,</span> <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.<span class="idiff left right">process.</span>Process.proc_type'</span><span class="p">,</span> <span class="n" style="color: #333;">index</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">9</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="190" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

190

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<td class="diff-line-num new_line" data-linenumber="190" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC190" class="line" lang="python">      <span class="n" style="color: #333;">number</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">10</span><span class="p">,</span> <span class="nb" style="color: #0086b3;">type</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">9</span><span class="p">,</span> <span class="n" style="color: #333;">cpp_type</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">9</span><span class="p">,</span> <span class="n" style="color: #333;">label</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">1</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

191

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<td class="diff-line-num new_line" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC191" class="line" lang="python">      <span class="n" style="color: #333;">has_default_value</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">False</span><span class="p">,</span> <span class="n" style="color: #333;">default_value</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">_b</span><span class="p">(</span><span class="s" style="color: #d14;">""</span><span class="p">)</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">decode</span><span class="p">(</span><span class="s" style="color: #d14;">'utf-8'</span><span class="p">),</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="192" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

192

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<td class="diff-line-num new_line" data-linenumber="192" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC192" class="line" lang="python">      <span class="n" style="color: #333;">message_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span> <span class="n" style="color: #333;">enum_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span> <span class="n" style="color: #333;">containing_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="193" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="193" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC193" class="line" lang="python">      <span class="n" style="color: #333;">is_extension</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">False</span><span class="p">,</span> <span class="n" style="color: #333;">extension_scope</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="194" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="194" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC194" class="line" lang="python">      <span class="n" style="color: #333;">options</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">),</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="195" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="195" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC195" class="line" lang="python">    <span class="n" style="color: #333;">_descriptor</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">FieldDescriptor</span><span class="p">(</span></span>

</pre>

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<td class="diff-line-num old old_line" data-linenumber="196" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<td class="diff-line-num new_line old" data-linenumber="196" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<pre style="margin: 0;">-<span id="LC196" class="line" lang="python">      <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'is_docker'</span><span class="p">,</span> <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.Process.is_docker'</span><span class="p">,</span> <span class="n" style="color: #333;">index</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">10</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="197" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="diff-line-num new new_line" data-linenumber="196" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC196" class="line" lang="python">      <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'is_docker'</span><span class="p">,</span> <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.<span class="idiff left right">process.</span>Process.is_docker'</span><span class="p">,</span> <span class="n" style="color: #333;">index</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">10</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="197" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="197" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC197" class="line" lang="python">      <span class="n" style="color: #333;">number</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">11</span><span class="p">,</span> <span class="nb" style="color: #0086b3;">type</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">8</span><span class="p">,</span> <span class="n" style="color: #333;">cpp_type</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">7</span><span class="p">,</span> <span class="n" style="color: #333;">label</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">1</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="198" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

198

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<td class="diff-line-num new_line" data-linenumber="198" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

198

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<pre style="margin: 0;"> <span id="LC198" class="line" lang="python">      <span class="n" style="color: #333;">has_default_value</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">True</span><span class="p">,</span> <span class="n" style="color: #333;">default_value</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">False</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

199

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<td class="diff-line-num new_line" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC199" class="line" lang="python">      <span class="n" style="color: #333;">message_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span> <span class="n" style="color: #333;">enum_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span> <span class="n" style="color: #333;">containing_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="200" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="200" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC200" class="line" lang="python">      <span class="n" style="color: #333;">is_extension</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">False</span><span class="p">,</span> <span class="n" style="color: #333;">extension_scope</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

</pre>

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<pre style="margin: 0;"> <span id="LC201" class="line" lang="python">      <span class="n" style="color: #333;">options</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">),</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="202" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC202" class="line" lang="python">    <span class="n" style="color: #333;">_descriptor</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">FieldDescriptor</span><span class="p">(</span></span>

</pre>

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<td class="diff-line-num old old_line" data-linenumber="203" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<td class="diff-line-num new_line old" data-linenumber="203" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<pre style="margin: 0;">-<span id="LC203" class="line" lang="python">      <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'docker'</span><span class="p">,</span> <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.Process.docker'</span><span class="p">,</span> <span class="n" style="color: #333;">index</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">11</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="204" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="diff-line-num new new_line" data-linenumber="203" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC203" class="line" lang="python">      <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'docker'</span><span class="p">,</span> <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.<span class="idiff left right">process.</span>Process.docker'</span><span class="p">,</span> <span class="n" style="color: #333;">index</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">11</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="204" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="204" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC204" class="line" lang="python">      <span class="n" style="color: #333;">number</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">12</span><span class="p">,</span> <span class="nb" style="color: #0086b3;">type</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">11</span><span class="p">,</span> <span class="n" style="color: #333;">cpp_type</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">10</span><span class="p">,</span> <span class="n" style="color: #333;">label</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">1</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="205" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="205" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC205" class="line" lang="python">      <span class="n" style="color: #333;">has_default_value</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">False</span><span class="p">,</span> <span class="n" style="color: #333;">default_value</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="206" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="206" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC206" class="line" lang="python">      <span class="n" style="color: #333;">message_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span> <span class="n" style="color: #333;">enum_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span> <span class="n" style="color: #333;">containing_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="217" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="diff-line-num unfold js-unfold new_line" data-linenumber="217" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -217,27 +217,27 @@ _PROCESS = _descriptor.Descriptor(</td>

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<td class="diff-line-num old_line" data-linenumber="217" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC217" class="line" lang="python">  <span class="n" style="color: #333;">extension_ranges</span><span class="o" style="font-weight: 600;">=</span><span class="p">[],</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="218" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC218" class="line" lang="python">  <span class="n" style="color: #333;">oneofs</span><span class="o" style="font-weight: 600;">=</span><span class="p">[</span></span>

</pre>

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<td class="diff-line-num new_line" data-linenumber="219" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC219" class="line" lang="python">  <span class="p">],</span></span>

</pre>

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<td class="diff-line-num old old_line" data-linenumber="220" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<td class="diff-line-num new_line old" data-linenumber="220" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<pre style="margin: 0;">-<span id="LC220" class="line" lang="python">  <span class="n" style="color: #333;">serialized_start</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;"><span class="idiff left right">26</span></span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old old_line" data-linenumber="221" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<td class="diff-line-num new_line old" data-linenumber="220" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<pre style="margin: 0;">-<span id="LC221" class="line" lang="python">  <span class="n" style="color: #333;">serialized_end</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;"><span class="idiff left right">390</span></span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="222" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="diff-line-num new new_line" data-linenumber="220" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC220" class="line" lang="python">  <span class="n" style="color: #333;">serialized_start</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;"><span class="idiff left right">38</span></span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="222" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="diff-line-num new new_line" data-linenumber="221" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC221" class="line" lang="python">  <span class="n" style="color: #333;">serialized_end</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;"><span class="idiff left right">418</span></span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="222" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC222" class="line" lang="python"><span class="p">)</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="223" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC223" class="line" lang="python"></span>

</pre>

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<pre style="margin: 0;"> <span id="LC224" class="line" lang="python"></span>

</pre>

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<pre style="margin: 0;"> <span id="LC225" class="line" lang="python"><span class="n" style="color: #333;">_OPERATION_TRACE</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">_descriptor</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">Descriptor</span><span class="p">(</span></span>

</pre>

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<pre style="margin: 0;"> <span id="LC226" class="line" lang="python">  <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'Trace'</span><span class="p">,</span></span>

</pre>

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<pre style="margin: 0;">-<span id="LC227" class="line" lang="python">  <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.Operation.Trace'</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="228" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="diff-line-num new new_line" data-linenumber="227" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC227" class="line" lang="python">  <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.<span class="idiff left right">process.</span>Operation.Trace'</span><span class="p">,</span></span>

</pre>

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<pre style="margin: 0;"> <span id="LC228" class="line" lang="python">  <span class="n" style="color: #333;">filename</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

</pre>

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<pre style="margin: 0;"> <span id="LC229" class="line" lang="python">  <span class="nb" style="color: #0086b3;">file</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">DESCRIPTOR</span><span class="p">,</span></span>

</pre>

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<pre style="margin: 0;"> <span id="LC230" class="line" lang="python">  <span class="n" style="color: #333;">containing_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="231" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="231" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC231" class="line" lang="python">  <span class="n" style="color: #333;">fields</span><span class="o" style="font-weight: 600;">=</span><span class="p">[</span></span>

</pre>

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<pre style="margin: 0;"> <span id="LC232" class="line" lang="python">    <span class="n" style="color: #333;">_descriptor</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">FieldDescriptor</span><span class="p">(</span></span>

</pre>

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<td class="diff-line-num new_line old" data-linenumber="233" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<pre style="margin: 0;">-<span id="LC233" class="line" lang="python">      <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'trace_id'</span><span class="p">,</span> <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.Operation.Trace.trace_id'</span><span class="p">,</span> <span class="n" style="color: #333;">index</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">0</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="234" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="diff-line-num new new_line" data-linenumber="233" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC233" class="line" lang="python">      <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'trace_id'</span><span class="p">,</span> <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.<span class="idiff left right">process.</span>Operation.Trace.trace_id'</span><span class="p">,</span> <span class="n" style="color: #333;">index</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">0</span><span class="p">,</span></span>

</pre>

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<pre style="margin: 0;"> <span id="LC234" class="line" lang="python">      <span class="n" style="color: #333;">number</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">1</span><span class="p">,</span> <span class="nb" style="color: #0086b3;">type</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">9</span><span class="p">,</span> <span class="n" style="color: #333;">cpp_type</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">9</span><span class="p">,</span> <span class="n" style="color: #333;">label</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">2</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num new_line" data-linenumber="235" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC235" class="line" lang="python">      <span class="n" style="color: #333;">has_default_value</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">False</span><span class="p">,</span> <span class="n" style="color: #333;">default_value</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">_b</span><span class="p">(</span><span class="s" style="color: #d14;">""</span><span class="p">)</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">decode</span><span class="p">(</span><span class="s" style="color: #d14;">'utf-8'</span><span class="p">),</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="236" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="236" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC236" class="line" lang="python">      <span class="n" style="color: #333;">message_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span> <span class="n" style="color: #333;">enum_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span> <span class="n" style="color: #333;">containing_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="237" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC237" class="line" lang="python">      <span class="n" style="color: #333;">is_extension</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">False</span><span class="p">,</span> <span class="n" style="color: #333;">extension_scope</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="238" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC238" class="line" lang="python">      <span class="n" style="color: #333;">options</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">),</span></span>

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<pre style="margin: 0;"> <span id="LC239" class="line" lang="python">    <span class="n" style="color: #333;">_descriptor</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">FieldDescriptor</span><span class="p">(</span></span>

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<pre style="margin: 0;">-<span id="LC240" class="line" lang="python">      <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'span_id'</span><span class="p">,</span> <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.Operation.Trace.span_id'</span><span class="p">,</span> <span class="n" style="color: #333;">index</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">1</span><span class="p">,</span></span>

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<pre style="margin: 0;">+<span id="LC240" class="line" lang="python">      <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'span_id'</span><span class="p">,</span> <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.<span class="idiff left right">process.</span>Operation.Trace.span_id'</span><span class="p">,</span> <span class="n" style="color: #333;">index</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">1</span><span class="p">,</span></span>

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<pre style="margin: 0;"> <span id="LC241" class="line" lang="python">      <span class="n" style="color: #333;">number</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">2</span><span class="p">,</span> <span class="nb" style="color: #0086b3;">type</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">9</span><span class="p">,</span> <span class="n" style="color: #333;">cpp_type</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">9</span><span class="p">,</span> <span class="n" style="color: #333;">label</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">2</span><span class="p">,</span></span>

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<pre style="margin: 0;"> <span id="LC242" class="line" lang="python">      <span class="n" style="color: #333;">has_default_value</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">False</span><span class="p">,</span> <span class="n" style="color: #333;">default_value</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">_b</span><span class="p">(</span><span class="s" style="color: #d14;">""</span><span class="p">)</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">decode</span><span class="p">(</span><span class="s" style="color: #d14;">'utf-8'</span><span class="p">),</span></span>

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<pre style="margin: 0;"> <span id="LC243" class="line" lang="python">      <span class="n" style="color: #333;">message_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span> <span class="n" style="color: #333;">enum_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span> <span class="n" style="color: #333;">containing_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="254" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="diff-line-num unfold js-unfold new_line" data-linenumber="254" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -254,33 +254,33 @@ _OPERATION_TRACE = _descriptor.Descriptor(</td>

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<pre style="margin: 0;"> <span id="LC254" class="line" lang="python">  <span class="n" style="color: #333;">extension_ranges</span><span class="o" style="font-weight: 600;">=</span><span class="p">[],</span></span>

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<pre style="margin: 0;"> <span id="LC255" class="line" lang="python">  <span class="n" style="color: #333;">oneofs</span><span class="o" style="font-weight: 600;">=</span><span class="p">[</span></span>

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<pre style="margin: 0;"> <span id="LC256" class="line" lang="python">  <span class="p">],</span></span>

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<pre style="margin: 0;">-<span id="LC257" class="line" lang="python">  <span class="n" style="color: #333;">serialized_start</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">5<span class="idiff left right">32</span></span><span class="p">,</span></span>

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<pre style="margin: 0;">-<span id="LC258" class="line" lang="python">  <span class="n" style="color: #333;">serialized_end</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;"><span class="idiff left right">574</span></span><span class="p">,</span></span>

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<pre style="margin: 0;">+<span id="LC257" class="line" lang="python">  <span class="n" style="color: #333;">serialized_start</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">5<span class="idiff left right">84</span></span><span class="p">,</span></span>

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<pre style="margin: 0;">+<span id="LC258" class="line" lang="python">  <span class="n" style="color: #333;">serialized_end</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;"><span class="idiff left right">626</span></span><span class="p">,</span></span>

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<pre style="margin: 0;"> <span id="LC259" class="line" lang="python"><span class="p">)</span></span>

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<pre style="margin: 0;"> <span id="LC260" class="line" lang="python"></span>

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<pre style="margin: 0;"> <span id="LC261" class="line" lang="python"><span class="n" style="color: #333;">_OPERATION</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">_descriptor</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">Descriptor</span><span class="p">(</span></span>

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<pre style="margin: 0;"> <span id="LC262" class="line" lang="python">  <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'Operation'</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old old_line" data-linenumber="263" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

263

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<td class="diff-line-num new_line old" data-linenumber="263" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<pre style="margin: 0;">-<span id="LC263" class="line" lang="python">  <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.Operation'</span><span class="p">,</span></span>

</pre>

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<tr class="line_holder new" id="" style="line-height: 1.6;">

<td class="diff-line-num new old_line" data-linenumber="264" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

</td>

<td class="diff-line-num new new_line" data-linenumber="263" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC263" class="line" lang="python">  <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.<span class="idiff left right">process.</span>Operation'</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="264" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

264

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<td class="diff-line-num new_line" data-linenumber="264" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC264" class="line" lang="python">  <span class="n" style="color: #333;">filename</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="265" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

265

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<td class="diff-line-num new_line" data-linenumber="265" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

265

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<pre style="margin: 0;"> <span id="LC265" class="line" lang="python">  <span class="nb" style="color: #0086b3;">file</span><span class="o" style="font-weight: 600;">=</span><span class="n" style="color: #333;">DESCRIPTOR</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="266" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="266" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC266" class="line" lang="python">  <span class="n" style="color: #333;">containing_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="267" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="267" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC267" class="line" lang="python">  <span class="n" style="color: #333;">fields</span><span class="o" style="font-weight: 600;">=</span><span class="p">[</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="268" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="268" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC268" class="line" lang="python">    <span class="n" style="color: #333;">_descriptor</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">FieldDescriptor</span><span class="p">(</span></span>

</pre>

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<td class="diff-line-num old old_line" data-linenumber="269" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<td class="diff-line-num new_line old" data-linenumber="269" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<pre style="margin: 0;">-<span id="LC269" class="line" lang="python">      <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'process'</span><span class="p">,</span> <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.Operation.process'</span><span class="p">,</span> <span class="n" style="color: #333;">index</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">0</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="270" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="diff-line-num new new_line" data-linenumber="269" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC269" class="line" lang="python">      <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'process'</span><span class="p">,</span> <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.<span class="idiff left right">process.</span>Operation.process'</span><span class="p">,</span> <span class="n" style="color: #333;">index</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">0</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="270" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="270" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC270" class="line" lang="python">      <span class="n" style="color: #333;">number</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">1</span><span class="p">,</span> <span class="nb" style="color: #0086b3;">type</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">11</span><span class="p">,</span> <span class="n" style="color: #333;">cpp_type</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">10</span><span class="p">,</span> <span class="n" style="color: #333;">label</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">1</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="271" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="271" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC271" class="line" lang="python">      <span class="n" style="color: #333;">has_default_value</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">False</span><span class="p">,</span> <span class="n" style="color: #333;">default_value</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="272" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="272" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC272" class="line" lang="python">      <span class="n" style="color: #333;">message_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span> <span class="n" style="color: #333;">enum_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span> <span class="n" style="color: #333;">containing_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="273" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="273" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC273" class="line" lang="python">      <span class="n" style="color: #333;">is_extension</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">False</span><span class="p">,</span> <span class="n" style="color: #333;">extension_scope</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="274" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="274" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC274" class="line" lang="python">      <span class="n" style="color: #333;">options</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">),</span></span>

</pre>

</td>

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<td class="diff-line-num old_line" data-linenumber="275" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="275" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC275" class="line" lang="python">    <span class="n" style="color: #333;">_descriptor</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">FieldDescriptor</span><span class="p">(</span></span>

</pre>

</td>

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<td class="diff-line-num old old_line" data-linenumber="276" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<td class="diff-line-num new_line old" data-linenumber="276" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<pre style="margin: 0;">-<span id="LC276" class="line" lang="python">      <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'type'</span><span class="p">,</span> <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.Operation.type'</span><span class="p">,</span> <span class="n" style="color: #333;">index</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">1</span><span class="p">,</span></span>

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<td class="diff-line-num new new_line" data-linenumber="276" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC276" class="line" lang="python">      <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'type'</span><span class="p">,</span> <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.<span class="idiff left right">process.</span>Operation.type'</span><span class="p">,</span> <span class="n" style="color: #333;">index</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">1</span><span class="p">,</span></span>

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<pre style="margin: 0;"> <span id="LC277" class="line" lang="python">      <span class="n" style="color: #333;">number</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">2</span><span class="p">,</span> <span class="nb" style="color: #0086b3;">type</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">14</span><span class="p">,</span> <span class="n" style="color: #333;">cpp_type</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">8</span><span class="p">,</span> <span class="n" style="color: #333;">label</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">2</span><span class="p">,</span></span>

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<pre style="margin: 0;"> <span id="LC278" class="line" lang="python">      <span class="n" style="color: #333;">has_default_value</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">True</span><span class="p">,</span> <span class="n" style="color: #333;">default_value</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">1</span><span class="p">,</span></span>

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<pre style="margin: 0;"> <span id="LC279" class="line" lang="python">      <span class="n" style="color: #333;">message_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span> <span class="n" style="color: #333;">enum_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span> <span class="n" style="color: #333;">containing_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

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<pre style="margin: 0;"> <span id="LC280" class="line" lang="python">      <span class="n" style="color: #333;">is_extension</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">False</span><span class="p">,</span> <span class="n" style="color: #333;">extension_scope</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

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<pre style="margin: 0;"> <span id="LC281" class="line" lang="python">      <span class="n" style="color: #333;">options</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">),</span></span>

</pre>

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<pre style="margin: 0;"> <span id="LC282" class="line" lang="python">    <span class="n" style="color: #333;">_descriptor</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">FieldDescriptor</span><span class="p">(</span></span>

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<pre style="margin: 0;">-<span id="LC283" class="line" lang="python">      <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'trace'</span><span class="p">,</span> <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.Operation.trace'</span><span class="p">,</span> <span class="n" style="color: #333;">index</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">2</span><span class="p">,</span></span>

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<pre style="margin: 0;">+<span id="LC283" class="line" lang="python">      <span class="n" style="color: #333;">name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'trace'</span><span class="p">,</span> <span class="n" style="color: #333;">full_name</span><span class="o" style="font-weight: 600;">=</span><span class="s" style="color: #d14;">'biomaj.<span class="idiff left right">process.</span>Operation.trace'</span><span class="p">,</span> <span class="n" style="color: #333;">index</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">2</span><span class="p">,</span></span>

</pre>

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<pre style="margin: 0;"> <span id="LC284" class="line" lang="python">      <span class="n" style="color: #333;">number</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">3</span><span class="p">,</span> <span class="nb" style="color: #0086b3;">type</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">11</span><span class="p">,</span> <span class="n" style="color: #333;">cpp_type</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">10</span><span class="p">,</span> <span class="n" style="color: #333;">label</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">1</span><span class="p">,</span></span>

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<pre style="margin: 0;"> <span id="LC285" class="line" lang="python">      <span class="n" style="color: #333;">has_default_value</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">False</span><span class="p">,</span> <span class="n" style="color: #333;">default_value</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

</pre>

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<pre style="margin: 0;"> <span id="LC286" class="line" lang="python">      <span class="n" style="color: #333;">message_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span> <span class="n" style="color: #333;">enum_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span> <span class="n" style="color: #333;">containing_type</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">None</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="298" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="diff-line-num unfold js-unfold new_line" data-linenumber="298" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -298,8 +298,8 @@ _OPERATION = _descriptor.Descriptor(</td>

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<pre style="margin: 0;"> <span id="LC298" class="line" lang="python">  <span class="n" style="color: #333;">extension_ranges</span><span class="o" style="font-weight: 600;">=</span><span class="p">[],</span></span>

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<pre style="margin: 0;"> <span id="LC299" class="line" lang="python">  <span class="n" style="color: #333;">oneofs</span><span class="o" style="font-weight: 600;">=</span><span class="p">[</span></span>

</pre>

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<pre style="margin: 0;"> <span id="LC300" class="line" lang="python">  <span class="p">],</span></span>

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<pre style="margin: 0;">-<span id="LC301" class="line" lang="python">  <span class="n" style="color: #333;">serialized_start</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;"><span class="idiff left right">393</span></span><span class="p">,</span></span>

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<pre style="margin: 0;">-<span id="LC302" class="line" lang="python">  <span class="n" style="color: #333;">serialized_end</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">6<span class="idiff left right">00</span></span><span class="p">,</span></span>

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<pre style="margin: 0;">+<span id="LC301" class="line" lang="python">  <span class="n" style="color: #333;">serialized_start</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;"><span class="idiff left right">421</span></span><span class="p">,</span></span>

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<td class="diff-line-num new old_line" data-linenumber="303" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC302" class="line" lang="python">  <span class="n" style="color: #333;">serialized_end</span><span class="o" style="font-weight: 600;">=</span><span class="mi" style="color: #099;">6<span class="idiff left right">52</span></span><span class="p">,</span></span>

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<pre style="margin: 0;"> <span id="LC303" class="line" lang="python"><span class="p">)</span></span>

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<pre style="margin: 0;"> <span id="LC304" class="line" lang="python"></span>

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<pre style="margin: 0;"> <span id="LC305" class="line" lang="python"><span class="n" style="color: #333;">_PROCESS_ENVVAR</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">containing_type</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">_PROCESS</span></span>

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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="318" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="diff-line-num unfold js-unfold new_line" data-linenumber="318" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -318,20 +318,20 @@ Process = _reflection.GeneratedProtocolMessageType('Process', (_message.Message,</td>

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<pre style="margin: 0;"> <span id="LC318" class="line" lang="python"></span>

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<pre style="margin: 0;"> <span id="LC319" class="line" lang="python">  <span class="n" style="color: #333;">EnvVar</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">_reflection</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">GeneratedProtocolMessageType</span><span class="p">(</span><span class="s" style="color: #d14;">'EnvVar'</span><span class="p">,</span> <span class="p">(</span><span class="n" style="color: #333;">_message</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">Message</span><span class="p">,),</span> <span class="nb" style="color: #0086b3;">dict</span><span class="p">(</span></span>

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<pre style="margin: 0;"> <span id="LC320" class="line" lang="python">    <span class="n" style="color: #333;">DESCRIPTOR</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">_PROCESS_ENVVAR</span><span class="p">,</span></span>

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<pre style="margin: 0;">-<span id="LC321" class="line" lang="python">    <span class="n" style="color: #333;">__module__</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">'message_pb2'</span></span>

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<pre style="margin: 0;">-<span id="LC322" class="line" lang="python">    <span class="c1" style="color: #998; font-style: italic;"># @@protoc_insertion_point(class_scope:biomaj.Process.EnvVar)</span></span>

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<pre style="margin: 0;">+<span id="LC321" class="line" lang="python">    <span class="n" style="color: #333;">__module__</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">'<span class="idiff left right">proc</span>message_pb2'</span></span>

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<pre style="margin: 0;">+<span id="LC322" class="line" lang="python">    <span class="c1" style="color: #998; font-style: italic;"># @@protoc_insertion_point(class_scope:biomaj.<span class="idiff left right">process.</span>Process.EnvVar)</span></span>

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<pre style="margin: 0;"> <span id="LC323" class="line" lang="python">    <span class="p">))</span></span>

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<pre style="margin: 0;"> <span id="LC324" class="line" lang="python">  <span class="p">,</span></span>

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<pre style="margin: 0;"> <span id="LC325" class="line" lang="python"></span>

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<pre style="margin: 0;"> <span id="LC326" class="line" lang="python">  <span class="n" style="color: #333;">Docker</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">_reflection</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">GeneratedProtocolMessageType</span><span class="p">(</span><span class="s" style="color: #d14;">'Docker'</span><span class="p">,</span> <span class="p">(</span><span class="n" style="color: #333;">_message</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">Message</span><span class="p">,),</span> <span class="nb" style="color: #0086b3;">dict</span><span class="p">(</span></span>

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<pre style="margin: 0;"> <span id="LC327" class="line" lang="python">    <span class="n" style="color: #333;">DESCRIPTOR</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">_PROCESS_DOCKER</span><span class="p">,</span></span>

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<pre style="margin: 0;">-<span id="LC328" class="line" lang="python">    <span class="n" style="color: #333;">__module__</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">'message_pb2'</span></span>

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<pre style="margin: 0;">-<span id="LC329" class="line" lang="python">    <span class="c1" style="color: #998; font-style: italic;"># @@protoc_insertion_point(class_scope:biomaj.Process.Docker)</span></span>

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<pre style="margin: 0;">+<span id="LC328" class="line" lang="python">    <span class="n" style="color: #333;">__module__</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">'<span class="idiff left right">proc</span>message_pb2'</span></span>

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<pre style="margin: 0;">+<span id="LC329" class="line" lang="python">    <span class="c1" style="color: #998; font-style: italic;"># @@protoc_insertion_point(class_scope:biomaj.<span class="idiff left right">process.</span>Process.Docker)</span></span>

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<pre style="margin: 0;"> <span id="LC330" class="line" lang="python">    <span class="p">))</span></span>

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<pre style="margin: 0;"> <span id="LC331" class="line" lang="python">  <span class="p">,</span></span>

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<pre style="margin: 0;"> <span id="LC332" class="line" lang="python">  <span class="n" style="color: #333;">DESCRIPTOR</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">_PROCESS</span><span class="p">,</span></span>

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<pre style="margin: 0;">-<span id="LC333" class="line" lang="python">  <span class="n" style="color: #333;">__module__</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">'message_pb2'</span></span>

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<pre style="margin: 0;">-<span id="LC334" class="line" lang="python">  <span class="c1" style="color: #998; font-style: italic;"># @@protoc_insertion_point(class_scope:biomaj.Process)</span></span>

</pre>

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<pre style="margin: 0;">+<span id="LC333" class="line" lang="python">  <span class="n" style="color: #333;">__module__</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">'<span class="idiff left right">proc</span>message_pb2'</span></span>

</pre>

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<pre style="margin: 0;">+<span id="LC334" class="line" lang="python">  <span class="c1" style="color: #998; font-style: italic;"># @@protoc_insertion_point(class_scope:biomaj.<span class="idiff left right">process.</span>Process)</span></span>

</pre>

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<pre style="margin: 0;"> <span id="LC335" class="line" lang="python">  <span class="p">))</span></span>

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<pre style="margin: 0;"> <span id="LC336" class="line" lang="python"><span class="n" style="color: #333;">_sym_db</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">RegisterMessage</span><span class="p">(</span><span class="n" style="color: #333;">Process</span><span class="p">)</span></span>

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<pre style="margin: 0;"> <span id="LC337" class="line" lang="python"><span class="n" style="color: #333;">_sym_db</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">RegisterMessage</span><span class="p">(</span><span class="n" style="color: #333;">Process</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">EnvVar</span><span class="p">)</span></span>

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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="341" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="diff-line-num unfold js-unfold new_line" data-linenumber="341" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -341,13 +341,13 @@ Operation = _reflection.GeneratedProtocolMessageType('Operation', (_message.Mess</td>

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<pre style="margin: 0;"> <span id="LC341" class="line" lang="python"></span>

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<pre style="margin: 0;"> <span id="LC342" class="line" lang="python">  <span class="n" style="color: #333;">Trace</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">_reflection</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">GeneratedProtocolMessageType</span><span class="p">(</span><span class="s" style="color: #d14;">'Trace'</span><span class="p">,</span> <span class="p">(</span><span class="n" style="color: #333;">_message</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">Message</span><span class="p">,),</span> <span class="nb" style="color: #0086b3;">dict</span><span class="p">(</span></span>

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<pre style="margin: 0;"> <span id="LC343" class="line" lang="python">    <span class="n" style="color: #333;">DESCRIPTOR</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">_OPERATION_TRACE</span><span class="p">,</span></span>

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<pre style="margin: 0;">-<span id="LC344" class="line" lang="python">    <span class="n" style="color: #333;">__module__</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">'message_pb2'</span></span>

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<pre style="margin: 0;">-<span id="LC345" class="line" lang="python">    <span class="c1" style="color: #998; font-style: italic;"># @@protoc_insertion_point(class_scope:biomaj.Operation.Trace)</span></span>

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<pre style="margin: 0;">+<span id="LC344" class="line" lang="python">    <span class="n" style="color: #333;">__module__</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">'<span class="idiff left right">proc</span>message_pb2'</span></span>

</pre>

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<pre style="margin: 0;">+<span id="LC345" class="line" lang="python">    <span class="c1" style="color: #998; font-style: italic;"># @@protoc_insertion_point(class_scope:biomaj.<span class="idiff left right">process.</span>Operation.Trace)</span></span>

</pre>

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<pre style="margin: 0;"> <span id="LC346" class="line" lang="python">    <span class="p">))</span></span>

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<pre style="margin: 0;"> <span id="LC347" class="line" lang="python">  <span class="p">,</span></span>

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<pre style="margin: 0;"> <span id="LC348" class="line" lang="python">  <span class="n" style="color: #333;">DESCRIPTOR</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">_OPERATION</span><span class="p">,</span></span>

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<pre style="margin: 0;">-<span id="LC349" class="line" lang="python">  <span class="n" style="color: #333;">__module__</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">'message_pb2'</span></span>

</pre>

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<pre style="margin: 0;">-<span id="LC350" class="line" lang="python">  <span class="c1" style="color: #998; font-style: italic;"># @@protoc_insertion_point(class_scope:biomaj.Operation)</span></span>

</pre>

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<pre style="margin: 0;">+<span id="LC349" class="line" lang="python">  <span class="n" style="color: #333;">__module__</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">'<span class="idiff left right">proc</span>message_pb2'</span></span>

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<pre style="margin: 0;">+<span id="LC350" class="line" lang="python">  <span class="c1" style="color: #998; font-style: italic;"># @@protoc_insertion_point(class_scope:biomaj.<span class="idiff left right">process.</span>Operation)</span></span>

</pre>

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<pre style="margin: 0;"> <span id="LC351" class="line" lang="python">  <span class="p">))</span></span>

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<pre style="margin: 0;"> <span id="LC352" class="line" lang="python"><span class="n" style="color: #333;">_sym_db</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">RegisterMessage</span><span class="p">(</span><span class="n" style="color: #333;">Operation</span><span class="p">)</span></span>

</pre>

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<pre style="margin: 0;"> <span id="LC353" class="line" lang="python"><span class="n" style="color: #333;">_sym_db</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">RegisterMessage</span><span class="p">(</span><span class="n" style="color: #333;">Operation</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">Trace</span><span class="p">)</span></span>

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<br>

</li>

<li id="c64cf380e97bd16851046a1a21ad29409f70c02e">

<a href="https://salsa.debian.org/med-team/biomaj3-process/compare/24108163e9687727cbc3319ff55fd5b7f1ef96ed...83899ece4705b1b988e00de0f4499822072ed4f9#c64cf380e97bd16851046a1a21ad29409f70c02e"><strong>biomaj_process/process.py</strong></a>

<hr>

<table class="code white" style="font-family: monospace; font-size: 90%;" bgcolor="#fff" width="100%" cellpadding="0" cellspacing="0">

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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="141" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="diff-line-num unfold js-unfold new_line" data-linenumber="141" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -141,11 +141,15 @@ class RemoteProcess(Process):</td>

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<pre style="margin: 0;"> <span id="LC141" class="line" lang="python"></span>

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<pre style="margin: 0;"> <span id="LC142" class="line" lang="python">    <span class="k" style="font-weight: 600;">def</span> <span class="nf" style="color: #900; font-weight: 600;">run</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="p">,</span> <span class="n" style="color: #333;">simulate</span><span class="o" style="font-weight: 600;">=</span><span class="bp" style="color: #999;">False</span><span class="p">):</span></span>

</pre>

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<pre style="margin: 0;"> <span id="LC143" class="line" lang="python">        <span class="n" style="color: #333;">psc</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">ProcessServiceClient</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">rabbit_mq</span><span class="p">,</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">rabbit_mq_port</span><span class="p">,</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">rabbit_mq_virtualhost</span><span class="p">,</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">rabbit_mq_user</span><span class="p">,</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">rabbit_mq_password</span><span class="p">)</span></span>

</pre>

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<td class="diff-line-num new_line old" data-linenumber="144" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<pre style="margin: 0;">-<span id="LC144" class="line" lang="python">        <span class="n" style="color: #333;">session</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">psc</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">create_session</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">bank</span><span class="p">,</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">proxy</span><span class="p">)</span></span>

</pre>

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<td class="diff-line-num new_line old" data-linenumber="144" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<pre style="margin: 0;">-<span id="LC145" class="line" lang="python">        <span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">biomaj_process.message</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">message_pb2</span></span>

</pre>

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<td class="diff-line-num new_line old" data-linenumber="144" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<pre style="margin: 0;">-<span id="LC146" class="line" lang="python">        <span class="n" style="color: #333;">biomaj_process</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">message_pb2</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">Operation</span><span class="p">()</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="147" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="diff-line-num new new_line" data-linenumber="144" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC144" class="line" lang="python">        <span class="k" style="font-weight: 600;">try</span><span class="p">:</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="147" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="diff-line-num new new_line" data-linenumber="145" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC145" class="line" lang="python">            <span class="n" style="color: #333;">session</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">psc</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">create_session</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">bank</span><span class="p">,</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">proxy</span><span class="p">)</span></span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="146" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC146" class="line" lang="python">        <span class="k" style="font-weight: 600;">except</span> <span class="nb" style="color: #0086b3;">Exception</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">e</span><span class="p">:</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="147" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="diff-line-num new new_line" data-linenumber="147" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC147" class="line" lang="python">            <span class="n" style="color: #333;">logging</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">exception</span><span class="p">(</span><span class="s" style="color: #d14;">'Process:RemoteProcess:Session:Create:Error:'</span> <span class="o" style="font-weight: 600;">+</span> <span class="nb" style="color: #0086b3;">str</span><span class="p">(</span><span class="n" style="color: #333;">e</span><span class="p">))</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="147" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="diff-line-num new new_line" data-linenumber="148" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC148" class="line" lang="python">            <span class="k" style="font-weight: 600;">return</span> <span class="bp" style="color: #999;">False</span></span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="149" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC149" class="line" lang="python">        <span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">biomaj_process.message</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">procmessage_pb2</span></span>

</pre>

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<td class="diff-line-num new new_line" data-linenumber="150" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC150" class="line" lang="python">        <span class="n" style="color: #333;">biomaj_process</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">procmessage_pb2</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">Operation</span><span class="p">()</span></span>

</pre>

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<pre style="margin: 0;"> <span id="LC151" class="line" lang="python">        <span class="n" style="color: #333;">biomaj_process</span><span class="o" style="font-weight: 600;">.</span><span class="nb" style="color: #0086b3;">type</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">1</span></span>

</pre>

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<td class="diff-line-num old old_line" data-linenumber="148" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<td class="diff-line-num new_line old" data-linenumber="152" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<td class="line_content noteable_line old" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#fbe9eb">

<pre style="margin: 0;">-<span id="LC148" class="line" lang="python">        <span class="n" style="color: #333;">process</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">message_pb2</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">Process</span><span class="p">()</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="149" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="diff-line-num new new_line" data-linenumber="152" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC152" class="line" lang="python">        <span class="n" style="color: #333;">process</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;"><span class="idiff left right">proc</span>message_pb2</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">Process</span><span class="p">()</span></span>

</pre>

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<td class="diff-line-num new_line" data-linenumber="153" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC153" class="line" lang="python">        <span class="n" style="color: #333;">process</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">bank</span> <span class="o" style="font-weight: 600;">=</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">bank</span></span>

</pre>

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<pre style="margin: 0;"> <span id="LC154" class="line" lang="python">        <span class="n" style="color: #333;">process</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">session</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">session</span></span>

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<pre style="margin: 0;"> <span id="LC155" class="line" lang="python">        <span class="n" style="color: #333;">process</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">log_dir</span> <span class="o" style="font-weight: 600;">=</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">log_dir</span></span>

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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="163" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -163,18 +167,23 @@ class RemoteProcess(Process):</td>

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<pre style="margin: 0;"> <span id="LC167" class="line" lang="python">        <span class="n" style="color: #333;">process</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">proc_type</span> <span class="o" style="font-weight: 600;">=</span> <span class="nb" style="color: #0086b3;">str</span><span class="p">(</span><span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">proc_type</span><span class="p">)</span></span>

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<pre style="margin: 0;"> <span id="LC168" class="line" lang="python">        <span class="k" style="font-weight: 600;">if</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">docker</span><span class="p">:</span></span>

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<pre style="margin: 0;"> <span id="LC169" class="line" lang="python">            <span class="n" style="color: #333;">process</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">is_docker</span> <span class="o" style="font-weight: 600;">=</span> <span class="bp" style="color: #999;">True</span></span>

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<pre style="margin: 0;">-<span id="LC166" class="line" lang="python">            <span class="n" style="color: #333;">docker_info</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">message_pb2</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">Process</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">Docker</span><span class="p">()</span></span>

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<pre style="margin: 0;">+<span id="LC170" class="line" lang="python">            <span class="n" style="color: #333;">docker_info</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;"><span class="idiff left right">proc</span>message_pb2</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">Process</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">Docker</span><span class="p">()</span></span>

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<pre style="margin: 0;"> <span id="LC171" class="line" lang="python">            <span class="n" style="color: #333;">docker_info</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">image</span> <span class="o" style="font-weight: 600;">=</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">docker</span></span>

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<pre style="margin: 0;"> <span id="LC172" class="line" lang="python">            <span class="n" style="color: #333;">docker_info</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">use_sudo</span> <span class="o" style="font-weight: 600;">=</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">docker_sudo</span></span>

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<pre style="margin: 0;"> <span id="LC173" class="line" lang="python">            <span class="n" style="color: #333;">process</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">docker</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">MergeFrom</span><span class="p">(</span><span class="n" style="color: #333;">docker_info</span><span class="p">)</span></span>

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<pre style="margin: 0;"> <span id="LC174" class="line" lang="python">        <span class="n" style="color: #333;">biomaj_process</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">process</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">MergeFrom</span><span class="p">(</span><span class="n" style="color: #333;">process</span><span class="p">)</span></span>

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<pre style="margin: 0;"> <span id="LC175" class="line" lang="python">        <span class="k" style="font-weight: 600;">if</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">trace_id</span><span class="p">:</span></span>

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<pre style="margin: 0;">-<span id="LC172" class="line" lang="python">            <span class="n" style="color: #333;">trace</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">message_pb2</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">Operation</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">Trace</span><span class="p">()</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="173" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC176" class="line" lang="python">            <span class="n" style="color: #333;">trace</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;"><span class="idiff left right">proc</span>message_pb2</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">Operation</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">Trace</span><span class="p">()</span></span>

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<pre style="margin: 0;"> <span id="LC177" class="line" lang="python">            <span class="n" style="color: #333;">trace</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">trace_id</span> <span class="o" style="font-weight: 600;">=</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">trace_id</span></span>

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<pre style="margin: 0;"> <span id="LC178" class="line" lang="python">            <span class="n" style="color: #333;">trace</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">span_id</span> <span class="o" style="font-weight: 600;">=</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">parent_id</span></span>

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<pre style="margin: 0;"> <span id="LC179" class="line" lang="python">            <span class="n" style="color: #333;">biomaj_process</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">trace</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">MergeFrom</span><span class="p">(</span><span class="n" style="color: #333;">trace</span><span class="p">)</span></span>

</pre>

</td>

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<td class="diff-line-num old_line" data-linenumber="176" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="180" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC180" class="line" lang="python">        <span class="n" style="color: #333;">psc</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">execute_process</span><span class="p">(</span><span class="n" style="color: #333;">biomaj_process</span><span class="p">)</span></span>

</pre>

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<td class="diff-line-num old old_line" data-linenumber="177" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<td class="diff-line-num new_line old" data-linenumber="181" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<pre style="margin: 0;">-<span id="LC177" class="line" lang="python">        <span class="p">(</span><span class="n" style="color: #333;">exitcode</span><span class="p">,</span> <span class="n" style="color: #333;">info</span><span class="p">)</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">psc</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">wait_for_process</span><span class="p">()</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="178" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="diff-line-num new new_line" data-linenumber="181" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC181" class="line" lang="python">        <span class="n" style="color: #333;">exitcode</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">0</span></span>

</pre>

</td>

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<td class="diff-line-num new old_line" data-linenumber="178" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="diff-line-num new new_line" data-linenumber="182" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

182

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<pre style="margin: 0;">+<span id="LC182" class="line" lang="python">        <span class="k" style="font-weight: 600;">try</span><span class="p">:</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="178" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="diff-line-num new new_line" data-linenumber="183" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC183" class="line" lang="python">            <span class="p">(</span><span class="n" style="color: #333;">exitcode</span><span class="p">,</span> <span class="n" style="color: #333;">info</span><span class="p">)</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">psc</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">wait_for_process</span><span class="p">()</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="178" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="diff-line-num new new_line" data-linenumber="184" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC184" class="line" lang="python">        <span class="k" style="font-weight: 600;">except</span> <span class="nb" style="color: #0086b3;">Exception</span> <span class="k" style="font-weight: 600;">as</span> <span class="n" style="color: #333;">e</span><span class="p">:</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="178" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="diff-line-num new new_line" data-linenumber="185" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC185" class="line" lang="python">            <span class="n" style="color: #333;">logging</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">exception</span><span class="p">(</span><span class="s" style="color: #d14;">'Error during process execution: '</span> <span class="o" style="font-weight: 600;">+</span> <span class="nb" style="color: #0086b3;">str</span><span class="p">(</span><span class="n" style="color: #333;">e</span><span class="p">))</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="178" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="diff-line-num new new_line" data-linenumber="186" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC186" class="line" lang="python">            <span class="n" style="color: #333;">exitcode</span> <span class="o" style="font-weight: 600;">=</span> <span class="mi" style="color: #099;">1</span></span>

</pre>

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<td class="diff-line-num new_line" data-linenumber="187" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC187" class="line" lang="python">        <span class="n" style="color: #333;">psc</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">clean</span><span class="p">()</span></span>

</pre>

</td>

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<td class="diff-line-num old_line" data-linenumber="179" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="188" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC188" class="line" lang="python">        <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">exitcode</span> <span class="o" style="font-weight: 600;">></span> <span class="mi" style="color: #099;">0</span><span class="p">:</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="180" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="189" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC189" class="line" lang="python">            <span class="k" style="font-weight: 600;">return</span> <span class="bp" style="color: #999;">False</span></span>

</pre>

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</table>

<br>

</li>

<li id="bdb5bd09615175c5acd9aa01c1e7cf72d48af7b4">

<a href="https://salsa.debian.org/med-team/biomaj3-process/compare/24108163e9687727cbc3319ff55fd5b7f1ef96ed...83899ece4705b1b988e00de0f4499822072ed4f9#bdb5bd09615175c5acd9aa01c1e7cf72d48af7b4"><strong>biomaj_process/process_client.py</strong></a>

<hr>

<table class="code white" style="font-family: monospace; font-size: 90%;" bgcolor="#fff" width="100%" cellpadding="0" cellspacing="0">

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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="104" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="diff-line-num unfold js-unfold new_line" data-linenumber="104" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -104,4 +104,4 @@ class ProcessServiceClient(object):</td>

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<pre style="margin: 0;"> <span id="LC104" class="line" lang="python">                        <span class="k" style="font-weight: 600;">return</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="105" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC105" class="line" lang="python">                <span class="k" style="font-weight: 600;">except</span> <span class="nb" style="color: #0086b3;">Exception</span><span class="p">:</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="106" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="106" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC106" class="line" lang="python">                    <span class="n" style="color: #333;">logging</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">exception</span><span class="p">(</span><span class="s" style="color: #d14;">'Failed to send clean operation: </span><span class="si" style="color: #d14;">%</span><span class="s" style="color: #d14;">s'</span> <span class="o" style="font-weight: 600;">%</span> <span class="p">(</span><span class="n" style="color: #333;">url</span><span class="p">))</span></span>

</pre>

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<td class="diff-line-num old old_line" data-linenumber="107" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<td class="diff-line-num new_line old" data-linenumber="107" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<pre style="margin: 0;">-<span id="LC107" class="line" lang="python">            <span class="k" style="font-weight: 600;"><span class="idiff left">raise</span></span><span class="idiff"> </span><span class="nb" style="color: #0086b3;"><span class="idiff">Exception</span></span><span class="p"><span class="idiff">(</span></span><span class="s" style="color: #d14;"><span class="idiff right">'Failed to connect to the process proxy'</span></span><span class="p">)</span></span></pre>

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<pre style="margin: 0;">+<span id="LC107" class="line" lang="python">            <span class="n" style="color: #333;"><span class="idiff left">logging</span></span><span class="o" style="font-weight: 600;"><span class="idiff">.</span></span><span class="n" style="color: #333;"><span class="idiff">error</span></span><span class="p"><span class="idiff">(</span></span><span class="s" style="color: #d14;"><span class="idiff">'Process:RemoteProcess:Session:Clean:Error:'</span></span><span class="idiff"> </span><span class="o" style="font-weight: 600;"><span class="idiff">+</span></span><span class="idiff"> </span><span class="bp" style="color: #999;"><span class="idiff">self</span></span><span class="o" style="font-weight: 600;"><span class="idiff">.</span></span><span class="n" style="color: #333;"><span class="idiff">bank</span></span><span class="idiff"> </span><span class="o" style="font-weight: 600;"><span class="idiff">+</span></span><span class="idiff"> </span><span class="s" style="color: #d14;"><span class="idiff">'/'</span></span><span class="idiff"> </span><span class="o" style="font-weight: 600;"><span class="idiff">+</span></span><span class="idiff"> </span><span class="bp" style="color: #999;"><span class="idiff">self</span></span><span class="o" style="font-weight: 600;"><span class="idiff">.</span></span><span class="n" style="color: #333;"><span class="idiff right">session</span></span><span class="p">)</span></span></pre>

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<br>

</li>

<li id="361eb55d71f9bd98b35147fb607d76a76cfc60b1">

<a href="https://salsa.debian.org/med-team/biomaj3-process/compare/24108163e9687727cbc3319ff55fd5b7f1ef96ed...83899ece4705b1b988e00de0f4499822072ed4f9#361eb55d71f9bd98b35147fb607d76a76cfc60b1"><strong>biomaj_process/process_service.py</strong></a>

<hr>

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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="11" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="diff-line-num unfold js-unfold new_line" data-linenumber="11" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -11,7 +11,7 @@ from flask import Flask</td>

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<pre style="margin: 0;"> <span id="LC11" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">flask</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">jsonify</span></span>

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<pre style="margin: 0;"> <span id="LC12" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">consul</span></span>

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<pre style="margin: 0;"> <span id="LC13" class="line" lang="python"></span>

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<td class="diff-line-num old old_line" data-linenumber="14" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<td class="diff-line-num new_line old" data-linenumber="14" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<pre style="margin: 0;">-<span id="LC14" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">biomaj_process.message</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">message_pb2</span></span>

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<td class="diff-line-num new old_line" data-linenumber="15" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="diff-line-num new new_line" data-linenumber="14" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC14" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">biomaj_process.message</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;"><span class="idiff left right">proc</span>message_pb2</span></span>

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<pre style="margin: 0;"> <span id="LC15" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">biomaj_process.process</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">Process</span></span>

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<pre style="margin: 0;"> <span id="LC16" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">biomaj_process.process</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">DockerProcess</span></span>

</pre>

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<pre style="margin: 0;"> <span id="LC17" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">biomaj_core.utils</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">Utils</span></span>

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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="225" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="diff-line-num unfold js-unfold new_line" data-linenumber="225" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -225,7 +225,7 @@ class ProcessService(object):</td>

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<pre style="margin: 0;"> <span id="LC225" class="line" lang="python"><span class="s" style="color: #d14;">        Manage download and send ACK message</span></span>

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<pre style="margin: 0;"> <span id="LC226" class="line" lang="python"><span class="s" style="color: #d14;">        '''</span></span>

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<pre style="margin: 0;"> <span id="LC227" class="line" lang="python">        <span class="k" style="font-weight: 600;">try</span><span class="p">:</span></span>

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<pre style="margin: 0;">-<span id="LC228" class="line" lang="python">            <span class="n" style="color: #333;">operation</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">message_pb2</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">Operation</span><span class="p">()</span></span>

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<td class="diff-line-num new old_line" data-linenumber="229" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC228" class="line" lang="python">            <span class="n" style="color: #333;">operation</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;"><span class="idiff left right">proc</span>message_pb2</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">Operation</span><span class="p">()</span></span>

</pre>

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<pre style="margin: 0;"> <span id="LC229" class="line" lang="python">            <span class="n" style="color: #333;">operation</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">ParseFromString</span><span class="p">(</span><span class="n" style="color: #333;">body</span><span class="p">)</span></span>

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<pre style="margin: 0;"> <span id="LC230" class="line" lang="python">            <span class="c1" style="color: #998; font-style: italic;"># self.logger.debug('Received message: %s' % (operation))</span></span>

</pre>

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<pre style="margin: 0;"> <span id="LC231" class="line" lang="python">            <span class="k" style="font-weight: 600;">if</span> <span class="n" style="color: #333;">operation</span><span class="o" style="font-weight: 600;">.</span><span class="nb" style="color: #0086b3;">type</span> <span class="o" style="font-weight: 600;">==</span> <span class="mi" style="color: #099;">1</span><span class="p">:</span></span>

</pre>

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</li>

<li id="9c96da0e9f91d7d8937b69b524702c106258f0d1">

<a href="https://salsa.debian.org/med-team/biomaj3-process/compare/24108163e9687727cbc3319ff55fd5b7f1ef96ed...83899ece4705b1b988e00de0f4499822072ed4f9#9c96da0e9f91d7d8937b69b524702c106258f0d1"><strong>debian/changelog</strong></a>

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1

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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">biomaj3-process (3.0.1<span class="idiff left right">0-2) UNRELEASED</span>; urgency=medium</span>

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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">biomaj3-process (3.0.1<span class="idiff left right">1-1) unstable</span>; urgency=medium</span>

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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext"></span>

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<td class="diff-line-num new new_line" data-linenumber="3" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext">  [ Jelmer Vernooĳ ]</span>

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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext">  * Use secure copyright file specification URI.</span>

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<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext">  * Trim trailing whitespace.</span>

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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext"></span>

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<pre style="margin: 0;">-<span id="LC6" class="line" lang="plaintext"> -- Jelmer Vernooĳ <jelmer@debian.org>  Sat, 20 Oct 2018 13:15:56 +0000</span>

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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext">  [ Olivier Sallou ]</span>

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<td class="diff-line-num new old_line" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext">  * New upstream release </span>

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<td class="diff-line-num new old_line" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext"></span>

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<pre style="margin: 0;">+<span id="LC10" class="line" lang="plaintext"> -- Olivier Sallou <osallou@debian.org>  Thu, 25 Oct 2018 09:08:51 +0000</span>

</pre>

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<pre style="margin: 0;"> <span id="LC11" class="line" lang="plaintext"></span>

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<pre style="margin: 0;"> <span id="LC12" class="line" lang="plaintext">biomaj3-process (3.0.10-1) unstable; urgency=medium</span>

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<pre style="margin: 0;"> <span id="LC13" class="line" lang="plaintext"></span>

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<li id="58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">

<a href="https://salsa.debian.org/med-team/biomaj3-process/compare/24108163e9687727cbc3319ff55fd5b7f1ef96ed...83899ece4705b1b988e00de0f4499822072ed4f9#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2"><strong>debian/control</strong></a>

<hr>

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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="22" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -22,8 +22,8 @@ Build-Depends: debhelper (>= 9), dh-python,</td>

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<pre style="margin: 0;"> <span id="LC22" class="line" lang="plaintext">               python3-biomaj3-zipkin</span>

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<pre style="margin: 0;"> <span id="LC23" class="line" lang="plaintext">Standards-Version: 4.1.3</span>

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<pre style="margin: 0;"> <span id="LC24" class="line" lang="plaintext">Homepage: https://github.com/genouest/biomaj-process</span>

</pre>

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<pre style="margin: 0;">-<span id="LC25" class="line" lang="plaintext">Vcs-Browser: https://<span class="idiff left right">anonscm.debian.org/cgit/debian-med/biomaj3-process.git</span></span>

</pre>

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<td class="diff-line-num old old_line" data-linenumber="26" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

26

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<td class="diff-line-num new_line old" data-linenumber="25" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<pre style="margin: 0;">-<span id="LC26" class="line" lang="plaintext">Vcs-Git: https://<span class="idiff left right">anonscm.debian.org/git/debian-med</span>/biomaj3-process.git</span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="27" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="diff-line-num new new_line" data-linenumber="25" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

25

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<pre style="margin: 0;">+<span id="LC25" class="line" lang="plaintext">Vcs-Browser: https://<span class="idiff left right">salsa.debian.org/med-team/biomaj3-process</span></span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="27" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<td class="diff-line-num new new_line" data-linenumber="26" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

26

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<pre style="margin: 0;">+<span id="LC26" class="line" lang="plaintext">Vcs-Git: https://<span class="idiff left right">salsa.debian.org/med-team</span>/biomaj3-process.git</span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="27" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

27

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27

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<pre style="margin: 0;"> <span id="LC27" class="line" lang="plaintext"></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="28" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC28" class="line" lang="plaintext">Package: python3-biomaj3-process</span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="29" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="29" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

29

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<pre style="margin: 0;"> <span id="LC29" class="line" lang="plaintext">Architecture: all</span>

</pre>

</td>

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<br>

</li>

<li id="8756c63497c8dc39f7773438edf53b220c773f67">

<a href="https://salsa.debian.org/med-team/biomaj3-process/compare/24108163e9687727cbc3319ff55fd5b7f1ef96ed...83899ece4705b1b988e00de0f4499822072ed4f9#8756c63497c8dc39f7773438edf53b220c773f67"><strong>debian/rules</strong></a>

<hr>

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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="diff-line-num unfold js-unfold new_line" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -7,7 +7,7 @@ export PYBUILD_NAME=biomaj-process</td>

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<td class="diff-line-num old_line" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

7

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7

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<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext">      dh $@ --with python3 --buildsystem=pybuild</span>

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8

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<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext"></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="9" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

9

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<td class="diff-line-num new_line" data-linenumber="9" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext">override_dh_auto_build:</span>

</pre>

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<td class="diff-line-num old old_line" data-linenumber="10" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

10

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<td class="diff-line-num new_line old" data-linenumber="10" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<pre style="margin: 0;">-<span id="LC10" class="line" lang="plaintext">     cd biomaj_process/message && protoc --python_out=. message.proto</span>

</pre>

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<td class="diff-line-num new old_line" data-linenumber="11" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">

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<pre style="margin: 0;">+<span id="LC10" class="line" lang="plaintext">     cd biomaj_process/message && protoc --python_out=. <span class="idiff left right">proc</span>message.proto</span>

</pre>

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<pre style="margin: 0;"> <span id="LC11" class="line" lang="plaintext">     dh_auto_build</span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="12" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC12" class="line" lang="plaintext"></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="13" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="13" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC13" class="line" lang="plaintext">override_dh_install:</span>

</pre>

</td>

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<br>

</li>

<li id="8e2edce0d507e1297474f25c00cae94258db38d8">

<a href="https://salsa.debian.org/med-team/biomaj3-process/compare/24108163e9687727cbc3319ff55fd5b7f1ef96ed...83899ece4705b1b988e00de0f4499822072ed4f9#8e2edce0d507e1297474f25c00cae94258db38d8"><strong>setup.py</strong></a>

<hr>

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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="21" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="diff-line-num unfold js-unfold new_line" data-linenumber="21" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -21,7 +21,7 @@ config = {</td>

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<td class="diff-line-num old_line" data-linenumber="21" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC21" class="line" lang="python">    <span class="s" style="color: #d14;">'url'</span><span class="p">:</span> <span class="s" style="color: #d14;">'http://biomaj.genouest.org'</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="22" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="22" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<pre style="margin: 0;"> <span id="LC22" class="line" lang="python">    <span class="s" style="color: #d14;">'download_url'</span><span class="p">:</span> <span class="s" style="color: #d14;">'http://biomaj.genouest.org'</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="23" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="diff-line-num new_line" data-linenumber="23" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

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<td class="line_content noteable_line" style="padding-left: 0.5em; padding-right: 0.5em;">

<pre style="margin: 0;"> <span id="LC23" class="line" lang="python">    <span class="s" style="color: #d14;">'author_email'</span><span class="p">:</span> <span class="s" style="color: #d14;">'olivier.sallou@irisa.fr'</span><span class="p">,</span></span>

</pre>

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<td class="diff-line-num old old_line" data-linenumber="24" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">

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<pre style="margin: 0;">-<span id="LC24" class="line" lang="python">    <span class="s" style="color: #d14;">'version'</span><span class="p">:</span> <span class="s" style="color: #d14;">'3.0.1<span class="idiff left right">0</span>'</span><span class="p">,</span></span>

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<pre style="margin: 0;">+<span id="LC24" class="line" lang="python">    <span class="s" style="color: #d14;">'version'</span><span class="p">:</span> <span class="s" style="color: #d14;">'3.0.1<span class="idiff left right">1</span>'</span><span class="p">,</span></span>

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<pre style="margin: 0;"> <span id="LC25" class="line" lang="python">     <span class="s" style="color: #d14;">'classifiers'</span><span class="p">:</span> <span class="p">[</span></span>

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<pre style="margin: 0;"> <span id="LC26" class="line" lang="python">        <span class="c1" style="color: #998; font-style: italic;"># How mature is this project? Common values are</span></span>

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<pre style="margin: 0;"> <span id="LC27" class="line" lang="python">        <span class="c1" style="color: #998; font-style: italic;">#   3 - Alpha</span></span>

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<br>

</li>

<li id="a5b5d0c7b9c558d9142a199ec517b633dd40faf5">

<a href="https://salsa.debian.org/med-team/biomaj3-process/compare/24108163e9687727cbc3319ff55fd5b7f1ef96ed...83899ece4705b1b988e00de0f4499822072ed4f9#a5b5d0c7b9c558d9142a199ec517b633dd40faf5"><strong>tests/biomaj_tests.py</strong></a>

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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -12,7 +12,7 @@ import time</td>

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<pre style="margin: 0;"> <span id="LC12" class="line" lang="python"></span>

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<pre style="margin: 0;"> <span id="LC13" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">mock</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">patch</span></span>

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<pre style="margin: 0;"> <span id="LC14" class="line" lang="python"></span>

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<pre style="margin: 0;">-<span id="LC15" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">biomaj_process.message</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">message_pb2</span></span>

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<pre style="margin: 0;">+<span id="LC15" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">biomaj_process.message</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;"><span class="idiff left right">proc</span>message_pb2</span></span>

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<pre style="margin: 0;"> <span id="LC16" class="line" lang="python"><span class="kn" style="font-weight: 600;">from</span> <span class="nn" style="color: #555;">biomaj_process.process_service</span> <span class="kn" style="font-weight: 600;">import</span> <span class="n" style="color: #333;">ProcessService</span></span>

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<pre style="margin: 0;"> <span id="LC17" class="line" lang="python"></span>

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<pre style="margin: 0;"> <span id="LC18" class="line" lang="python"><span class="kn" style="font-weight: 600;">import</span> <span class="nn" style="color: #555;">unittest</span></span>

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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="34" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>

<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -34,7 +34,7 @@ class TestBiomajProcess(unittest.TestCase):</td>

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<pre style="margin: 0;"> <span id="LC34" class="line" lang="python">    <span class="s" style="color: #d14;">"""</span></span>

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<pre style="margin: 0;"> <span id="LC35" class="line" lang="python"><span class="s" style="color: #d14;">    Checks bank init</span></span>

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<pre style="margin: 0;"> <span id="LC36" class="line" lang="python"><span class="s" style="color: #d14;">    """</span></span>

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<pre style="margin: 0;">-<span id="LC37" class="line" lang="python">    <span class="n" style="color: #333;">msg</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">message_pb2</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">Process</span><span class="p">()</span></span>

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<pre style="margin: 0;">+<span id="LC37" class="line" lang="python">    <span class="n" style="color: #333;">msg</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;"><span class="idiff left right">proc</span>message_pb2</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">Process</span><span class="p">()</span></span>

</pre>

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38

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<td class="diff-line-num new_line" data-linenumber="38" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

38

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<pre style="margin: 0;"> <span id="LC38" class="line" lang="python">    <span class="n" style="color: #333;">msg</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">bank</span> <span class="o" style="font-weight: 600;">=</span> <span class="s" style="color: #d14;">'test'</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="39" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

39

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<td class="diff-line-num new_line" data-linenumber="39" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

39

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<pre style="margin: 0;"> <span id="LC39" class="line" lang="python">    <span class="n" style="color: #333;">msg</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">session</span> <span class="o" style="font-weight: 600;">=</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">session</span></span>

</pre>

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<td class="diff-line-num old_line" data-linenumber="40" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">

40

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40

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<pre style="margin: 0;"> <span id="LC40" class="line" lang="python">    <span class="n" style="color: #333;">msg</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">log_dir</span> <span class="o" style="font-weight: 600;">=</span> <span class="bp" style="color: #999;">self</span><span class="o" style="font-weight: 600;">.</span><span class="n" style="color: #333;">test_dir</span></span>

</pre>

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