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<h3>
Andreas Tille pushed to branch upstream
at <a href="https://salsa.debian.org/med-team/mothur">Debian Med / mothur</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/mothur/commit/bdf1c59047362a018fba87cd1baa71e081d2798c">bdf1c590</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-10-25T06:55:54Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 1.41.0.pre-release</pre>
</li>
</ul>
<h4>22 changed files:</h4>
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<li class="file-stats">
<a href="#836efb6e25a091dcb4ff8e1dbb2f0be6a5cbf14c">
Makefile
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<li class="file-stats">
<a href="#8b67dc09b93b38e95da2a54036fa1db5b207cc5b">
Mothur.xcodeproj/project.pbxproj
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<li class="file-stats">
<a href="#06d2aaf9fb93b3895e7dc78f8dfb146a6e2d4775">
<span class="new-file">
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TestMothur/IntegrationTests/454sop.cpp
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<li class="file-stats">
<a href="#43d16680fb275fbd9b464db245169d57edc061e6">
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+
TestMothur/IntegrationTests/454sop.hpp
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<li class="file-stats">
<a href="#d39622badde35c2d74af49bcabc46f0a3c74f6c3">
<span class="new-file">
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TestMothur/IntegrationTests/miseqsop.cpp
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<li class="file-stats">
<a href="#b61a49eba6ec97703694e47252b1661b78117e3d">
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TestMothur/IntegrationTests/miseqsop.hpp
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<li class="file-stats">
<a href="#349e45681551c81c3edb9ee02178f837bd8846d8">
<span class="new-file">
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TestMothur/IntegrationTests/testintegrationalignseqs.cpp
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<li class="file-stats">
<a href="#092907fa912fc0179309dd99b8b363d1800cf7f3">
<span class="new-file">
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TestMothur/IntegrationTests/testintegrationalignseqs.hpp
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<li class="file-stats">
<a href="#b2511acd5a71e24e0557e10936ea7703a3ea0bea">
<span class="deleted-file">
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TestMothur/catch.hpp
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<li class="file-stats">
<a href="#0021503191f63152fd781eb93c8f12a7ee87bd0a">
<span class="deleted-file">
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TestMothur/custom/gtest-port.h
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<li class="file-stats">
<a href="#d935b21ca0735801475de709558d2a0af1a03ca9">
<span class="deleted-file">
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TestMothur/custom/gtest-printers.h
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<li class="file-stats">
<a href="#7d701a7886c2e70ec8a7a4602ccb6cce57b8296e">
<span class="deleted-file">
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TestMothur/custom/gtest.h
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<li class="file-stats">
<a href="#3d2be9b6dc155afbdfdae99a138869afc67a4e0e">
TestMothur/dataset.cpp
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<li class="file-stats">
<a href="#8ae6e25dd342c18d933158a720005b4fb57b38e3">
TestMothur/dataset.h
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<li class="file-stats">
<a href="#f74a8c96999448e1c0857e0f005053c5299c2c7f">
TestMothur/distcdataset.cpp
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<li class="file-stats">
<a href="#e37aa2f6091f71bf57a194b8099cc641bcc6c309">
TestMothur/distcdataset.h
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<li class="file-stats">
<a href="#32336bb38321e071a06d98c619e5d1988d50e762">
TestMothur/fakes/fakeoligos.h
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<li class="file-stats">
<a href="#5e7769acc1e95df95a47a4b3d24cf6e9e447132b">
TestMothur/fakes/fakeoptimatrix.cpp
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<li class="file-stats">
<a href="#f96e7a5cbc781ead6955dee503a276510af0bd35">
TestMothur/fakes/fakeoptimatrix.hpp
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<li class="file-stats">
<a href="#63547f2d569d07c56ec295aea59e1f23074d79de">
TestMothur/fastqdataset.cpp
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<li class="file-stats">
<a href="#ca8638c298e020a294d33c07ce22cdafa9d12c64">
TestMothur/fastqdataset.h
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<li class="file-stats">
<a href="#d4224e3c4a5d2a60946ded9c63d527e7e7f591b8">
<span class="deleted-file">
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TestMothur/gtest-all.cc
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<h5>The diff was not included because it is too large.</h5>
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