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<h3>
Alexandre Mestiashvili pushed to branch upstream
at <a href="https://salsa.debian.org/med-team/subread">Debian Med / subread</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/subread/commit/edf71ef6d8bc38598338b79badc25eb81974be2f">edf71ef6</a></strong>
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<span>by Alexandre Mestiashvili</span>
<i>at 2018-10-11T11:51:36Z</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 1.6.3+dfsg</pre>
</li>
</ul>
<h4>22 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#9b9715372d0cd39d21711a077b6f2ae42fb45135">
doc/SubreadUsersGuide.tex
</a>
</li>
<li class="file-stats">
<a href="#7079f81404dcaadc0154c53a419b2d1cb5f253e6">
src/HelperFunctions.c
</a>
</li>
<li class="file-stats">
<a href="#c5bb90e41c35273ab5b21defedfdb01254fbc8f6">
src/Makefile.FreeBSD
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<li class="file-stats">
<a href="#c1b8d333291fcba8482e6874c5a8cf61b565242c">
src/Makefile.Linux
</a>
</li>
<li class="file-stats">
<a href="#0f0909639769aa3e7d493b832c416371ba8f6089">
src/Makefile.MacOS
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<li class="file-stats">
<a href="#03b53aa7b28dab0125f2bb23f06f341cab6c608d">
src/SNPCalling.c
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<li class="file-stats">
<a href="#de13a8a387b0f71a691e5d23cf74468d6ad7c0a0">
src/core-bigtable.c
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<li class="file-stats">
<a href="#296b4814ae931def4e82a8f84e22f6c24f5b3b14">
src/core-indel.c
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<li class="file-stats">
<a href="#269c5079f32c711431ad058d1e3ac63987f29255">
src/core-indel.h
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<li class="file-stats">
<a href="#ecc92c74c51f8b1692fd1bd13b9657e456522c0a">
src/core-interface-aligner.c
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<li class="file-stats">
<a href="#431a9a7f741eae0019b2785bf4ae504ca6fe0271">
src/core-interface-subjunc.c
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<li class="file-stats">
<a href="#d7c9610d0bb39f36045810aea42dfc930a2d041f">
src/core-junction.c
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<li class="file-stats">
<a href="#a26ea438a2b6aee04f419d17c87da7e9b997e7ae">
src/core.c
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<li class="file-stats">
<a href="#3ff152fe6bda3f5dfee9715abff394de66921551">
src/core.h
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<li class="file-stats">
<a href="#cb694fb45e0f09c24c9a2441c1640b76efdf7b88">
src/coverage_calc.c
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<li class="file-stats">
<a href="#18d5c843fdde01c811087dacdcf7dbe1f38af4d3">
src/gene-algorithms.c
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<li class="file-stats">
<a href="#db883abc086707d455e41cc6745055f2475bcc7f">
src/index-builder.c
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<li class="file-stats">
<a href="#af240e90f84ee342e36f1a8ee0eb08f1a4b16a3d">
src/input-files.c
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<li class="file-stats">
<a href="#6907133cceb8c785482dac4a3125dbff95a3d8e2">
src/input-files.h
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<li class="file-stats">
<a href="#425bd1a4976c5c2d9304588f9677dde9f41fb5b7">
src/longread-one/LRMconfig.h
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<li class="file-stats">
<a href="#e0a41fae3dcf6b8f6387090ee96ebdd7376261bd">
src/longread-one/LRMfile-io.c
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</li>
<li class="file-stats">
<a href="#4d075f9c8f48325589258b0e43848200e65828fb">
src/longread-one/LRMsorted-hashtable.c
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</ul>
<h5>The diff was not included because it is too large.</h5>
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