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<h3>
Dylan Aïssi pushed to branch upstream
at <a href="https://salsa.debian.org/med-team/bio-eagle">Debian Med / bio-eagle</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/bio-eagle/commit/36dcc828f0667521cb8a8016559c7f16d5bae30d">36dcc828</a></strong>
<div>
<span>by Dylan Aïssi</span>
<i>at 2018-11-24T13:54:49Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 2.4.1</pre>
</li>
</ul>
<h4>30 changed files:</h4>
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<li class="file-stats">
<a href="#4a4984e578e234294ce35dd28ca453b6909e803b">
example/example.log
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<a href="#ac7dc8dcf444b0c9e1493f64dd9982eade7720d3">
example/example_ref.log
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<li class="file-stats">
<a href="#2ca73e36f6cc0d0b899244e3f1006ee55e8775d3">
example/example_vcf.log
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<li class="file-stats">
<a href="#f2f8dff2052392b6c3507cb7700169841fb31329">
example/phased.vcf.gz
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<li class="file-stats">
<a href="#19149b08150fd664d8d81d96f4c3f8d98d24c1cb">
example/target.phased.vcf.gz
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<li class="file-stats">
<a href="#15cddb6ca645684cda75ec9aa2e848d9fb8f633a">
src/DipTreePBWT.cpp
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<li class="file-stats">
<a href="#de7a80c0db45428e3a9146d516fb3eaeea9508c5">
src/DipTreePBWT.hpp
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<li class="file-stats">
<a href="#60ac96bf1046030c1114f967855af9785ad9d900">
src/Eagle.cpp
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<li class="file-stats">
<a href="#89ffac254fa1e7606f9a4ee93a33293caa83a3f4">
src/Eagle.hpp
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<li class="file-stats">
<a href="#3a55858523ef5108a2c0d63a486ef9fba8b5f1bc">
src/EagleImpMiss.cpp
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<li class="file-stats">
<a href="#a8a0034af8dc548af6b5cbaf8bc14cbafbd89544">
src/EagleMain.cpp
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<li class="file-stats">
<a href="#b84f4bc9c0b4fabbb7809180f8f4fbb2732d5f46">
src/EaglePBWT.cpp
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<li class="file-stats">
<a href="#c47826663ea67905128c6edced1a0af092da0664">
src/EagleParams.cpp
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<li class="file-stats">
<a href="#694946cf3c2c3361f6263f2efb7baf6556be4776">
src/EagleParams.hpp
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<li class="file-stats">
<a href="#e947d91ee6ec8479a3f3df2f41ada8ed7685ed3c">
src/FileUtils.cpp
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<li class="file-stats">
<a href="#34072bc9bc6ed42de1dd25b7c9a798f9a8bb6424">
src/FileUtils.hpp
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<li class="file-stats">
<a href="#c96561850000a455a1c08a8eb301da72c982d544">
src/GenoData.cpp
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<a href="#49b1cc3d6eb7170d551aba6c90874f75b1380e94">
src/GenoData.hpp
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<li class="file-stats">
<a href="#1bdabdc219ba6de89defcae0c770fb3260b225a6">
src/HapHedge.cpp
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<li class="file-stats">
<a href="#83d48969d4061fd26b2394615448abaf2c0bc4b2">
src/HapHedge.hpp
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<li class="file-stats">
<a href="#0e439300d1664b0471f6c3a04bfc83fd7eb9f4d2">
src/LapackConst.hpp
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<li class="file-stats">
<a href="#09a8e11089bd7b184c2ba7778565c1350e1c7e3a">
src/Makefile
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<li class="file-stats">
<a href="#54ada6ebb982870daacb859b5b058bf18df7ba4d">
src/MapInterpolater.cpp
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<li class="file-stats">
<a href="#53153e1f7df3b3c8a505d05e35267c97cf1e8f0e">
src/MapInterpolater.hpp
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<li class="file-stats">
<a href="#e4d3ffbee864b615757bb88a1561a2cb7416c4a0">
src/MemoryUtils.cpp
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<li class="file-stats">
<a href="#3516daa7d1eb88801b8ee6d737c2cb8a9be54b92">
src/MemoryUtils.hpp
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<li class="file-stats">
<a href="#bdd3335b7ba69340ddddac89ed513195de2dd597">
src/NumericUtils.cpp
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<li class="file-stats">
<a href="#8ea98204c1bd4947f2b745b0c1781e3316f74126">
src/NumericUtils.hpp
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<li class="file-stats">
<a href="#8e209a085cadc3f7c5195ef1000b8b66d6ed03c3">
src/StaticMultimap.cpp
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<li class="file-stats">
<a href="#ad171be6cf189e17f4cd47bafa06ee9a8ca494cf">
src/StaticMultimap.hpp
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</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
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