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<h3>
Emmanuel Bourg pushed to branch master
at <a href="https://salsa.debian.org/med-team/figtree">Debian Med / figtree</a>
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<h4>
Commits:
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<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/figtree/commit/78b2507eb989c5c41b026d2e9ca4962b80ddb8d5">78b2507e</a></strong>
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<span>by Emmanuel Bourg</span>
<i>at 2018-11-30T09:37:21Z</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Fixed the build failure with Java 11 (Closes: #912235)
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<strong><a href="https://salsa.debian.org/med-team/figtree/commit/2f7e1d744783a47258added9664a02b55998cab6">2f7e1d74</a></strong>
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<span>by Emmanuel Bourg</span>
<i>at 2018-11-30T09:37:40Z</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Removed the dfsg suffix
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<strong><a href="https://salsa.debian.org/med-team/figtree/commit/9a6fa4ffd401b9e9dea41a285f0a16569a7e9e58">9a6fa4ff</a></strong>
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<span>by Emmanuel Bourg</span>
<i>at 2018-11-30T09:37:56Z</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Upload to unstable
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<h4>7 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
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<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
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<li class="file-stats">
<a href="#ab65732034040b91c648c56898fb4045a2ecf76c">
debian/figtree.manifest
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<li class="file-stats">
<a href="#158fa582a87a9b92e6a1c50bdc1e32a4be247197">
debian/patches/0009-add-batik-all.jar.patch
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<li class="file-stats">
<a href="#60bc9af5ec216f8a84f4c14ada50ecf18d619e42">
debian/patches/fix_classpath_in_build_xml.patch
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<li class="file-stats">
<a href="#8756c63497c8dc39f7773438edf53b220c773f67">
debian/rules
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<a href="#68ef9f98c01c7eecd4c605cc26048a06f3304b79">
debian/watch
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<h4>Changes:</h4>
<li id="9c96da0e9f91d7d8937b69b524702c106258f0d1">
<a href="https://salsa.debian.org/med-team/figtree/compare/98e9ba3798f3b69f09550173002ce96911c0b85f...9a6fa4ffd401b9e9dea41a285f0a16569a7e9e58#9c96da0e9f91d7d8937b69b524702c106258f0d1"><strong>debian/changelog</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">figtree (1.4.4<span class="idiff left right">+dfsg-1) UNRELEASED</span>; urgency=medium</span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">figtree (1.4.4<span class="idiff left right">-1) unstable</span>; urgency=medium</span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC3" class="line" lang="plaintext"> [ Fabian Klötzl ]</span>
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<pre style="margin: 0;">-<span id="LC4" class="line" lang="plaintext"> * use JDK 8 (fix by Graham Inggs)</span>
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="plaintext"> Closes: #908039</span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext"> * Team upload</span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext"> * Fixed the build failure with Java 11 (Closes: #912235)</span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC7" class="line" lang="plaintext"> -- <span class="idiff left right">Fabian Klötzl <kloetzl@evolbio.mpg.de> Mon, 29 Oct 2018 15:27:36 +00</span>00</span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"> -- <span class="idiff left right">Emmanuel Bourg <ebourg@apache.org> Fri, 30 Nov 2018 10:37:49 +01</span>00</span>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext">figtree (1.4.3+dfsg-6) unstable; urgency=medium</span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext"></span>
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<li id="58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
<a href="https://salsa.debian.org/med-team/figtree/compare/98e9ba3798f3b69f09550173002ce96911c0b85f...9a6fa4ffd401b9e9dea41a285f0a16569a7e9e58#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2"><strong>debian/control</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -6,8 +6,9 @@ Section: science</td>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext">Priority: optional</span>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext">Build-Depends: debhelper (>= 11~),</span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext"> javahelper,</span>
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<pre style="margin: 0;">-<span id="LC9" class="line" lang="plaintext"> <span class="idiff left right">openjdk-8</span>-jdk,</span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext"> <span class="idiff left right">default</span>-jdk,</span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext"> ant,</span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="plaintext"> libactivation-java,</span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="plaintext"> libbatik-java,</span>
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="plaintext"> libjebl2-java,</span>
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="plaintext"> libjam-java (>= 0.1.20140824),</span>
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<li id="ab65732034040b91c648c56898fb4045a2ecf76c">
<a href="https://salsa.debian.org/med-team/figtree/compare/98e9ba3798f3b69f09550173002ce96911c0b85f...9a6fa4ffd401b9e9dea41a285f0a16569a7e9e58#ab65732034040b91c648c56898fb4045a2ecf76c"><strong>debian/figtree.manifest</strong></a>
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1
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="plaintext">usr/share/java/figtree.jar:</span>
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<pre style="margin: 0;">-<span id="LC2" class="line" lang="plaintext"> Class-Path: /usr/share/java/jebl.jar /usr/share/java/jam.jar /usr/share/java/freehep-graphics2d.jar /usr/share/java/freehep-graphicsio.jar /usr/share/java/freehep-graphicsio-pdf.jar /usr/share/java/freehep-graphicsio-ps.jar /usr/share/java/freehep-graphicsio-emf.jar /usr/share/java/freehep-graphicsio-swf.jar /usr/share/java/freehep-graphicsio-svg.jar /usr/share/java/freehep-export.jar /usr/share/java/itext5.jar /usr/share/java/batik-svggen.jar /usr/share/java/batik-dom.jar /usr/share/java/batik-awt-util.jar /usr/share/java/batik-ext.jar /usr/share/java/batik-util.jar /usr/share/java/batik-xml.jar /usr/share/java/batik-constants.jar</span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="plaintext"> Class-Path: /usr/share/java/jebl.jar /usr/share/java/jam.jar /usr/share/java/freehep-graphics2d.jar /usr/share/java/freehep-graphicsio.jar /usr/share/java/freehep-graphicsio-pdf.jar /usr/share/java/freehep-graphicsio-ps.jar /usr/share/java/freehep-graphicsio-emf.jar /usr/share/java/freehep-graphicsio-swf.jar /usr/share/java/freehep-graphicsio-svg.jar /usr/share/java/freehep-export.jar /usr/share/java/itext5.jar /usr/share/java/batik-svggen.jar /usr/share/java/batik-dom.jar /usr/share/java/batik-awt-util.jar /usr/share/java/batik-ext.jar /usr/share/java/batik-util.jar /usr/share/java/batik-xml.jar /usr/share/java/batik-constants.jar<span class="idiff left right"> /usr/share/java/javax.activation.jar</span></span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext"> Main-Class: figtree/application/FigTreeApplication</span></pre>
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<li id="158fa582a87a9b92e6a1c50bdc1e32a4be247197">
<a href="https://salsa.debian.org/med-team/figtree/compare/98e9ba3798f3b69f09550173002ce96911c0b85f...9a6fa4ffd401b9e9dea41a285f0a16569a7e9e58#158fa582a87a9b92e6a1c50bdc1e32a4be247197"><strong>debian/patches/0009-add-batik-all.jar.patch</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -14,8 +14,8 @@ index 2773e5d..d1f4310 100755</td>
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="diff"> <target name="compile" depends="init"></span>
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<pre style="margin: 0;"> <span id="LC15" class="line" lang="diff"> <!-- Compile the java code from ${src} into ${build} --></span>
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<pre style="margin: 0;"> <span id="LC16" class="line" lang="diff"> <javac source="1.6" target="1.6" srcdir="${src}" destdir="${build}"</span>
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<pre style="margin: 0;">-<span id="LC17" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- classpath="${deblib}/jebl.jar:${deblib}/jam.jar:${deblib}/batik-awt-util.jar:${deblib}/batik-dom.jar:${deblib}/batik-ext.jar:${deblib}/batik-svggen.jar:${deblib}/batik-util.jar:${deblib}/batik-xml.jar:${deblib}/freehep-graphics2d.jar:${deblib}/freehep-graphicsio.jar:${deblib}/freehep-graphicsio-pdf.jar:${deblib}/freehep-graphicsio-ps.jar:${deblib}/freehep-graphicsio-emf.jar:${deblib}/freehep-graphicsio-swf.jar:${deblib}/freehep-graphicsio-svg.jar:${deblib}/freehep-export.jar:${deblib}/itext5.jar:${env.JAVA_HOME}/lib/sa-jdi.jar"></span></span>
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<pre style="margin: 0;">-<span id="LC18" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ classpath="${deblib}/jebl.jar:${deblib}/jam.jar:${deblib}/batik-all.jar:${deblib}/batik-awt-util.jar:${deblib}/batik-dom.jar:${deblib}/batik-ext.jar:${deblib}/batik-svggen.jar:${deblib}/batik-util.jar:${deblib}/batik-xml.jar:${deblib}/freehep-graphics2d.jar:${deblib}/freehep-graphicsio.jar:${deblib}/freehep-graphicsio-pdf.jar:${deblib}/freehep-graphicsio-ps.jar:${deblib}/freehep-graphicsio-emf.jar:${deblib}/freehep-graphicsio-swf.jar:${deblib}/freehep-graphicsio-svg.jar:${deblib}/freehep-export.jar:${deblib}/itext5.jar:${env.JAVA_HOME}/lib/sa-jdi.jar"></span></span>
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<td class="diff-line-num new new_line" data-linenumber="17" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- classpath="${deblib}/jebl.jar:${deblib}/jam.jar:${deblib}/batik-awt-util.jar:${deblib}/batik-dom.jar:${deblib}/batik-ext.jar:${deblib}/batik-svggen.jar:${deblib}/batik-util.jar:${deblib}/batik-xml.jar:${deblib}/freehep-graphics2d.jar:${deblib}/freehep-graphicsio.jar:${deblib}/freehep-graphicsio-pdf.jar:${deblib}/freehep-graphicsio-ps.jar:${deblib}/freehep-graphicsio-emf.jar:${deblib}/freehep-graphicsio-swf.jar:${deblib}/freehep-graphicsio-svg.jar:${deblib}/freehep-export.jar:${deblib}/itext5.jar:${<span class="idiff left right">deblib}/javax.activation.jar:${</span>env.JAVA_HOME}/lib/sa-jdi.jar"></span></span>
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<td class="diff-line-num new new_line" data-linenumber="18" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ classpath="${deblib}/jebl.jar:${deblib}/jam.jar:${deblib}/batik-all.jar:${deblib}/batik-awt-util.jar:${deblib}/batik-dom.jar:${deblib}/batik-ext.jar:${deblib}/batik-svggen.jar:${deblib}/batik-util.jar:${deblib}/batik-xml.jar:${deblib}/freehep-graphics2d.jar:${deblib}/freehep-graphicsio.jar:${deblib}/freehep-graphicsio-pdf.jar:${deblib}/freehep-graphicsio-ps.jar:${deblib}/freehep-graphicsio-emf.jar:${deblib}/freehep-graphicsio-swf.jar:${deblib}/freehep-graphicsio-svg.jar:${deblib}/freehep-export.jar:${deblib}/itext5.jar:${<span class="idiff left right">deblib}/javax.activation.jar:${</span>env.JAVA_HOME}/lib/sa-jdi.jar"></span></span>
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<pre style="margin: 0;"> <span id="LC19" class="line" lang="diff"> <include name="figtree/**"/></span>
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<pre style="margin: 0;"> <span id="LC20" class="line" lang="diff"> </javac></span>
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<pre style="margin: 0;"> <span id="LC21" class="line" lang="diff"> <copy todir="${build}" verbose="true"></span></pre>
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<li id="60bc9af5ec216f8a84f4c14ada50ecf18d619e42">
<a href="https://salsa.debian.org/med-team/figtree/compare/98e9ba3798f3b69f09550173002ce96911c0b85f...9a6fa4ffd401b9e9dea41a285f0a16569a7e9e58#60bc9af5ec216f8a84f4c14ada50ecf18d619e42"><strong>debian/patches/fix_classpath_in_build_xml.patch</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -18,7 +18,7 @@ Subject: adapt build file to match debian env</td>
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="diff"> <!-- Compile the java code from ${src} into ${build} --></span>
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<pre style="margin: 0;"> <span id="LC19" class="line" lang="diff"> <javac source="1.6" target="1.6" srcdir="${src}" destdir="${build}"</span>
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<pre style="margin: 0;"> <span id="LC20" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- classpath="${lib}/jebl.jar:${lib}/jam.jar:${lib}/batik-awt-util.jar:${lib}/batik-dom.jar:${lib}/batik-ext.jar:${lib}/batik-svggen.jar:${lib}/batik-util.jar:${lib}/batik-xml.jar:${lib}/xml-apis.jar:${lib}/iText.jar:${lib}/quaqua.jar:${lib}/jwt/servlet-api-2.5-6.0.2.jar:${lib}/jwt/jwt-3.1.7pre1.jar"></span></span>
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<pre style="margin: 0;">-<span id="LC21" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ classpath="${deblib}/jebl.jar:${deblib}/jam.jar:${deblib}/batik-awt-util.jar:${deblib}/batik-dom.jar:${deblib}/batik-ext.jar:${deblib}/batik-svggen.jar:${deblib}/batik-util.jar:${deblib}/batik-xml.jar:${deblib}/freehep-graphics2d.jar:${deblib}/freehep-graphicsio.jar:${deblib}/freehep-graphicsio-pdf.jar:${deblib}/freehep-graphicsio-ps.jar:${deblib}/freehep-graphicsio-emf.jar:${deblib}/freehep-graphicsio-swf.jar:${deblib}/freehep-graphicsio-svg.jar:${deblib}/freehep-export.jar:${deblib}/itext5.jar:${env.JAVA_HOME}/lib/sa-jdi.jar"></span></span>
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<pre style="margin: 0;">+<span id="LC21" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ classpath="${deblib}/jebl.jar:${deblib}/jam.jar:${deblib}/batik-awt-util.jar:${deblib}/batik-dom.jar:${deblib}/batik-ext.jar:${deblib}/batik-svggen.jar:${deblib}/batik-util.jar:${deblib}/batik-xml.jar:${deblib}/freehep-graphics2d.jar:${deblib}/freehep-graphicsio.jar:${deblib}/freehep-graphicsio-pdf.jar:${deblib}/freehep-graphicsio-ps.jar:${deblib}/freehep-graphicsio-emf.jar:${deblib}/freehep-graphicsio-swf.jar:${deblib}/freehep-graphicsio-svg.jar:${deblib}/freehep-export.jar:${deblib}/itext5.jar:${<span class="idiff left right">deblib}/javax.activation.jar:${</span>env.JAVA_HOME}/lib/sa-jdi.jar"></span></span>
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<pre style="margin: 0;"> <span id="LC22" class="line" lang="diff"> <include name="figtree/**"/></span>
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<pre style="margin: 0;"> <span id="LC23" class="line" lang="diff"> </javac></span>
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<pre style="margin: 0;"> <span id="LC24" class="line" lang="diff"> <copy todir="${build}" verbose="true"></span>
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<a href="https://salsa.debian.org/med-team/figtree/compare/98e9ba3798f3b69f09550173002ce96911c0b85f...9a6fa4ffd401b9e9dea41a285f0a16569a7e9e58#8756c63497c8dc39f7773438edf53b220c773f67"><strong>debian/rules</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -6,8 +6,6 @@</td>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext"># Uncomment this to turn on verbose mode.</span>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext">#export DH_VERBOSE=1</span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC9" class="line" lang="plaintext">export JAVA_HOME=/usr/lib/jvm/java-8-openjdk-$(DEB_HOST_ARCH)</span>
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<pre style="margin: 0;">-<span id="LC10" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext">%:</span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext"> dh $@ --with javahelper</span>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="plaintext"></span>
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<a href="https://salsa.debian.org/med-team/figtree/compare/98e9ba3798f3b69f09550173002ce96911c0b85f...9a6fa4ffd401b9e9dea41a285f0a16569a7e9e58#68ef9f98c01c7eecd4c605cc26048a06f3304b79"><strong>debian/watch</strong></a>
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="plaintext">version=4</span>
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<pre style="margin: 0;">-<span id="LC2" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC3" class="line" lang="plaintext"><span class="idiff left right">opts=repacksuffix=+dfsg,dversionmangle=s/\+dfsg//g </span>https://github.com/rambaut/figtree/tags .*/v(\d[.\d]+)\.(?:tgz|tbz2|txz|tar\.(?:gz|bz2|xz))</span></pre>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="plaintext">opts=repack,compression=xz,dversionmangle=s/\+dfsg//g \</span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext">https://github.com/rambaut/figtree/tags .*/v(\d[.\d]+)\.(?:tgz|tbz2|txz|tar\.(?:gz|bz2|xz))</span></pre>
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