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<h3>
Andreas Tille pushed to branch upstream
at <a href="https://salsa.debian.org/med-team/igv">Debian Med / igv</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/igv/commit/1ded7e330b1fdd266019610a4df6d1880959ef8f">1ded7e33</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-12-06T08:08:52Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 2.4.16+dfsg</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#8ec9a00bfd09b3190ac6b22251dbb1aa95a0579d">
build_readme.txt
→
README.md
</a>
</li>
<li class="file-stats">
<a href="#f07866736216be0ee2aba49e392191aeae700a35">
build.gradle
</a>
</li>
<li class="file-stats">
<a href="#8cba0216d3ee9ef186a016b86bfd2a6d0f609a86">
build_java9.gradle
</a>
</li>
<li class="file-stats">
<a href="#0fb61042b1ba60999b01ef05841d8cddfdb23269">
<span class="new-file">
+
genomes/db/hg19/1KG.s3.xml
</span>
</a>
</li>
<li class="file-stats">
<a href="#0b59a06aec235c8ae40c4513f351a515b779a0c6">
genomes/db/hg19/hg19_annotations.xml
</a>
</li>
<li class="file-stats">
<a href="#06af505b8fe47918e4aa2c7640e331d75611f2cb">
genomes/db/hg19/hg19_dataServerRegistry.txt
</a>
</li>
<li class="file-stats">
<a href="#85b0ed119383810ab1f4fc907edaf73c41932679">
genomes/db/hg38/hg38_annotations.xml
</a>
</li>
<li class="file-stats">
<a href="#1c9e471e5f5f9589b9cd0787847b93eea3827dc8">
genomes/db/hg38/hg38_dataServerRegistry.txt
</a>
</li>
<li class="file-stats">
<a href="#79af1f1fc0b2f1f64f1360f3f80e71bb81998051">
genomes/genomes.txt
</a>
</li>
<li class="file-stats">
<a href="#2afbb999f001938c88fa43fc2ef52abf0f8213e4">
gradle.properties
</a>
</li>
<li class="file-stats">
<a href="#a21cd47f471d78574815c875103673c2e0775094">
scripts/igv.sh
</a>
</li>
<li class="file-stats">
<a href="#aa000b114180cd81f3f45c3d636bf1566edb1616">
scripts/igvtools_gui
</a>
</li>
<li class="file-stats">
<a href="#cacbd78d7d3fc1ba2ab67befc8efa7432c1d2498">
scripts/igvtools_readme.txt
</a>
</li>
<li class="file-stats">
<a href="#fa1e97b57faf2bfabd1c64f76dfcbad6e0bbaed6">
scripts/java9/Info.plist.template
</a>
</li>
<li class="file-stats">
<a href="#ab209e3236a13f5fa28231e37f1bd77a3f857c85">
scripts/java9/igv.bat
</a>
</li>
<li class="file-stats">
<a href="#e2100462d25ce636d6bd5e300fb2619de41503dd">
scripts/java9/igv.command
</a>
</li>
<li class="file-stats">
<a href="#4e8ed3985bc59a0742c532a65142b406c23ef875">
scripts/java9/igv.sh
</a>
</li>
<li class="file-stats">
<a href="#5ef03490fac5700d07ecc898f396cb9007c14e77">
scripts/java9/igv_hidpi.sh
</a>
</li>
<li class="file-stats">
<a href="#56ebf34e4aa4458cba3300630fcb2c4dde46bd2e">
scripts/java9/igvtools
</a>
</li>
<li class="file-stats">
<a href="#b4412d3d401459d69c087991f51d2afb88c36793">
scripts/java9/igvtools_gui
</a>
</li>
<li class="file-stats">
<a href="#aa751512dd3e36a5c633c60fcb1833df4c975cf8">
scripts/java9/igvtools_gui.bat
</a>
</li>
<li class="file-stats">
<a href="#209e2510a87e2549f88a23ce887e555b9d6ea682">
scripts/java9/igvtools_gui.command
</a>
</li>
<li class="file-stats">
<a href="#6446df4062392bea578c9d651831f834291bc74d">
scripts/java9/igvtools_gui_hidpi
</a>
</li>
<li class="file-stats">
<a href="#698a8151758c8ce5ff06f50e9397be053bfcfe24">
scripts/java9/igvtools_readme.txt
</a>
</li>
<li class="file-stats">
<a href="#f94acfbfe1025161443c007924519432f05cc2a6">
scripts/java9/readme.txt
</a>
</li>
<li class="file-stats">
<a href="#e3706bbbb07fc1823e5b80fcee6c5b57a3460eff">
<span class="new-file">
+
scripts/java9/test_suite.args
</span>
</a>
</li>
<li class="file-stats">
<a href="#d04688bc0feae636cc7ddb1da376a5ca9a471e66">
scripts/readme.txt
</a>
</li>
<li class="file-stats">
<a href="#c9f197de2c8bb1d9292879569d30dc4bfa8a7f34">
src/main/java/com/sanityinc/jargs/CmdLineParser.java
</a>
</li>
<li class="file-stats">
<a href="#e444ebf686027724485bf3a775c6cf5007472045">
src/main/java/org/broad/igv/batch/CommandExecutor.java
</a>
</li>
<li class="file-stats">
<a href="#32205e8c4804bb651fadf8f6ba33fcb040a22913">
src/main/java/org/broad/igv/charts/ScatterPlotFrame.java
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
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