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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/concavity">Debian Med / concavity</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/concavity/commit/977e07687ab36cb0c532a4c5ef41ffb689f7d9b3">977e0768</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-12-07T23:04:05Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Make sure C++ compiler is used for C++ sources
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/concavity/commit/34ebc57362773a24a9c7fc7443cc8854f9ad70b4">34ebc573</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-12-07T23:04:41Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Standards-Version: 4.2.1
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/concavity/commit/5ffe807acd2e2b1d8fdc4921739dc4b8de1cf1ee">5ffe807a</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-12-07T23:07:47Z</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Close bug
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/concavity/commit/41b9add5fda0f0306115608994ef4954eb547ff9">41b9add5</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-12-07T23:11:40Z</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Upload to unstable
</pre>
</li>
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<h4>4 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
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<li class="file-stats">
<a href="#0d8181cd8c9dbe68093a8faf79725cbbd10e3e73">
<span class="new-file">
+
debian/patches/cross.patch
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</a>
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<li class="file-stats">
<a href="#bc34014ab4b9a49dd7a27bdd8d352912607c3a96">
debian/patches/series
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</ul>
<h4>Changes:</h4>
<li id="9c96da0e9f91d7d8937b69b524702c106258f0d1">
<a href="https://salsa.debian.org/med-team/concavity/compare/6e1f8992674f94d8055f1fa2798ad1d84e7e22d5...41b9add5fda0f0306115608994ef4954eb547ff9#9c96da0e9f91d7d8937b69b524702c106258f0d1"><strong>debian/changelog</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">concavity (0.1+dfsg.1-<span class="idiff left right">3) UNRELEASED</span>; urgency=medium</span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">concavity (0.1+dfsg.1-<span class="idiff left right">4) unstable</span>; urgency=medium</span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext"> [ Jelmer Vernooij ]</span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext"> * Use secure copyright file specification URI.</span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="plaintext"> -- Jelmer Vernooij <jelmer@debian.org> Sat, 20 Oct 2018 14:00:12 +0000</span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"> [ Helmut Grohne ]</span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"> * Make sure C++ compiler is used for C++ sources</span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext"> Closes: #904145</span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="plaintext"> [ Andreas Tille ]</span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="plaintext"> * Standards-Version: 4.2.1</span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="plaintext"> -- Andreas Tille <tille@debian.org> Sat, 08 Dec 2018 00:08:02 +0100</span>
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC15" class="line" lang="plaintext">concavity (0.1+dfsg.1-2) unstable; urgency=medium</span>
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<pre style="margin: 0;"> <span id="LC16" class="line" lang="plaintext"></span>
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<a href="https://salsa.debian.org/med-team/concavity/compare/6e1f8992674f94d8055f1fa2798ad1d84e7e22d5...41b9add5fda0f0306115608994ef4954eb547ff9#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2"><strong>debian/control</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -5,7 +5,7 @@ Uploaders: Laszlo Kajan <lkajan@rostlab.org>,</td>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext">Section: science</span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext">Priority: optional</span>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext">Build-Depends: debhelper (>= 11~)</span>
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<pre style="margin: 0;">-<span id="LC8" class="line" lang="plaintext">Standards-Version: 4.<span class="idiff left right">1.5</span></span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext">Standards-Version: 4.<span class="idiff left right">2.1</span></span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext">Vcs-Browser: https://salsa.debian.org/med-team/concavity</span>
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10
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext">Vcs-Git: https://salsa.debian.org/med-team/concavity.git</span>
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11
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11
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="plaintext">Homepage: http://compbio.cs.princeton.edu/concavity/</span>
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<li id="0d8181cd8c9dbe68093a8faf79725cbbd10e3e73">
<a href="https://salsa.debian.org/med-team/concavity/compare/6e1f8992674f94d8055f1fa2798ad1d84e7e22d5...41b9add5fda0f0306115608994ef4954eb547ff9#0d8181cd8c9dbe68093a8faf79725cbbd10e3e73"><strong>debian/patches/cross.patch</strong></a>
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1
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="diff">Author: : Helmut Grohne <helmut@subdivi.de></span>
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2
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="diff">Date: Fri, 20 Jul 2018 15:33:01 UTC</span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="diff">Bug-Debian: https://bugs.debian.org/904145</span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="diff">Description: Make sure C++ compiler is used for C++ sources</span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="diff"></span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- a/scripts/Makefile.apps</span></span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/scripts/Makefile.apps</span></span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="diff"><span class="gu" style="color: #800080; font-weight: 600;">@@ -74,7 +74,7 @@ debug:</span></span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="diff"> $(EXE): $(OBJS) $(LIBDIR)</span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="diff"> mkdir -p $(EXE_DIR)</span>
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<td class="diff-line-num new new_line" data-linenumber="12" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- $(CC) -o $(EXE) $(LDFLAGS) $(USER_OBJS) $(OBJS) $(LIBS)</span></span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ $(CXX) -o $(EXE) $(LDFLAGS) $(USER_OBJS) $(OBJS) $(LIBS)</span></span>
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="diff"> release:</span>
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="diff"> mkdir -p $(RELEASE_DIR)/apps</span>
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- a/scripts/Makefile.std</span></span>
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/scripts/Makefile.std</span></span>
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="diff"><span class="gu" style="color: #800080; font-weight: 600;">@@ -17,7 +17,7 @@ INCS=$(HSRCS) $(CCSRCS:.C=.h) $(CSRCS:.c</span></span>
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="diff"> # C flags</span>
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<pre style="margin: 0;">+<span id="LC21" class="line" lang="diff"> #</span>
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<pre style="margin: 0;">+<span id="LC22" class="line" lang="diff"> </span>
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23
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<pre style="margin: 0;">+<span id="LC23" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-CC=g++</span></span>
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<pre style="margin: 0;">+<span id="LC24" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+CXX=g++</span></span>
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<pre style="margin: 0;">+<span id="LC25" class="line" lang="diff"> BASE_CFLAGS=$(USER_CFLAGS) -Wall -I. -I../../pkgs </span>
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<pre style="margin: 0;">+<span id="LC26" class="line" lang="diff"> DEBUG_CFLAGS=$(BASE_CFLAGS) -g</span>
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27
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<pre style="margin: 0;">+<span id="LC27" class="line" lang="diff"> OPT_CFLAGS=$(BASE_CFLAGS) -O3 -DNDEBUG</span>
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<pre style="margin: 0;">+<span id="LC28" class="line" lang="diff"><span class="gu" style="color: #800080; font-weight: 600;">@@ -52,7 +52,7 @@ LIB_DIR=../../lib/$(ARCH)</span></span>
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<pre style="margin: 0;">+<span id="LC29" class="line" lang="diff"> .SUFFIXES: .c .C .o</span>
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<pre style="margin: 0;">+<span id="LC30" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC31" class="line" lang="diff"> .C.o:</span>
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<pre style="margin: 0;">+<span id="LC32" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- $(CC) $(CPPFLAGS) $(CFLAGS) -c $<</span></span>
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<pre style="margin: 0;">+<span id="LC33" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ $(CXX) $(CPPFLAGS) $(CFLAGS) -c $<</span></span>
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<pre style="margin: 0;">+<span id="LC34" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC35" class="line" lang="diff"> .c.o:</span>
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36
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<pre style="margin: 0;">+<span id="LC36" class="line" lang="diff"> gcc $(CPPFLAGS) $(CFLAGS) -c $<</span></pre>
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<a href="https://salsa.debian.org/med-team/concavity/compare/6e1f8992674f94d8055f1fa2798ad1d84e7e22d5...41b9add5fda0f0306115608994ef4954eb547ff9#bc34014ab4b9a49dd7a27bdd8d352912607c3a96"><strong>debian/patches/series</strong></a>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="8" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="8" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -8,3 +8,4 @@ compiler_errors</td>
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8
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8
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext">manpage</span>
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9
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext">threshold_range_cutoff</span>
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10
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext">remove_ply</span>
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11
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="plaintext">cross.patch</span></pre>
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