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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/rapmap">Debian Med / rapmap</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/rapmap/commit/7d4f7e0bad62791c6fb9a34e815981d6e78f5cbf">7d4f7e0b</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-12-12T19:46:59Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">For some reason rapmap releases are prefixed by "salmon-" - adapt watch file
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/rapmap/commit/bd4699a0d57bce8f0f69a13f338bfdbd5f48be21">bd4699a0</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-12-12T19:47:25Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 0.12.0+dfsg</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/rapmap/commit/169f856ef0ad38ed4b619db21ae3ddaa9ddd38e4">169f856e</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-12-12T19:47:27Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/0.12.0+dfsg'
Update to upstream version '0.12.0+dfsg'
with Debian dir c416ddb50009eac72a29664b04f5148102e12981</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/rapmap/commit/4a2a9288962a7456b068f6c2bf3dcdc7741bb29c">4a2a9288</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-12-12T19:47:27Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/rapmap/commit/e523a70b70892c2eacc3b93767f88cdaf408c8ec">e523a70b</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2018-12-12T20:09:06Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Adapt patches
</pre>
</li>
</ul>
<h4>19 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#0c345f0bb5b5a2d4b9c71a79c2119620aebbd7fa">
<span class="new-file">
+
.vscode/c_cpp_properties.json
</span>
</a>
</li>
<li class="file-stats">
<a href="#9a2aa4db38d3115ed60da621e012c0efc0172aae">
CMakeLists.txt
</a>
</li>
<li class="file-stats">
<a href="#c7f40a54d00d6f8d8d6ed620e9eca2fc44022b21">
cmake/Modules/FindJemalloc.cmake
</a>
</li>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#fcb551aded3cad4b67410f8068927c4116407fc3">
<span class="deleted-file">
−
debian/patches/libspdlog_14_0.patch
</span>
</a>
</li>
<li class="file-stats">
<a href="#bc34014ab4b9a49dd7a27bdd8d352912607c3a96">
debian/patches/series
</a>
</li>
<li class="file-stats">
<a href="#c886bb5a971047d317de48cd0de8548654d1438d">
debian/patches/use-debian-libs.patch
</a>
</li>
<li class="file-stats">
<a href="#68ef9f98c01c7eecd4c605cc26048a06f3304b79">
debian/watch
</a>
</li>
<li class="file-stats">
<a href="#e246b7a1c95906b59ca509ef776a45d2fb355183">
include/BooPHF.hpp
</a>
</li>
<li class="file-stats">
<a href="#5fb49382fac3ea217a9d6370073f917b12e9e034">
include/FastxParser.hpp
</a>
</li>
<li class="file-stats">
<a href="#335609a35be34ca99f8e15537a878ae3e11a6051">
<span class="new-file">
+
include/FastxParserThreadUtils.hpp
</span>
</a>
</li>
<li class="file-stats">
<a href="#0e29d7af797496b8cfbf19f180e15753806bcdb6">
include/FrugalBooMap.hpp
</a>
</li>
<li class="file-stats">
<a href="#e2c1238c2ad9d2223dfea9a03006ad38ba264508">
include/HitManager.hpp
</a>
</li>
<li class="file-stats">
<a href="#8333be08055d5056bd0f6637f1f47542ec5a64de">
include/IndexHeader.hpp
</a>
</li>
<li class="file-stats">
<a href="#f46f3adfc4612060db21de5f61d5e5797a5188a6">
<span class="new-file">
+
include/Kmer.hpp
</span>
</a>
</li>
<li class="file-stats">
<a href="#35ddfdff9cfbb739396a59a367b17a0174438b2c">
include/RapMapConfig.hpp
</a>
</li>
<li class="file-stats">
<a href="#256d0124695e487afe36d367675d86ce19d986b6">
include/RapMapUtils.hpp
</a>
</li>
<li class="file-stats">
<a href="#f105b38304e55dbc88b8c44c7a8ad42c96cb282e">
include/SACollector.hpp
</a>
</li>
<li class="file-stats">
<a href="#78505689dab5951044e5f266971ce1d085bf446e">
include/SASearcher.hpp
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
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