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GitLab

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<h3>

Andreas Tille pushed to branch upstream

at <a href="https://salsa.debian.org/med-team/diamond-aligner">Debian Med / diamond-aligner</a>

</h3>

<h4>

Commits:

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<strong><a href="https://salsa.debian.org/med-team/diamond-aligner/commit/e06c99fdd5d713ab0c8799b52208a650cd891847">e06c99fd</a></strong>

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<span>by Andreas Tille</span>

<i>at 2018-12-13T12:48:47Z</i>

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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 0.9.23+dfsg</pre>

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<h4>30 changed files:</h4>

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<a href="#a5cc2925ca8258af241be7e5b0381edf30266302">

.gitignore

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<a href="#dea01dd89a3b602828e630677fde5d77c06441c8">

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+

.travis.yml

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<a href="#9a2aa4db38d3115ed60da621e012c0efc0172aae">

CMakeLists.txt

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<a href="#0398ccd0f49298b10a3d76a47800d2ebecd49859">

LICENSE

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<a href="#8ec9a00bfd09b3190ac6b22251dbb1aa95a0579d">

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+

README.md

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<a href="#561b88e19de321ca62c7590bbb350765fb110905">

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−

README.rst

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<li class="file-stats">

<a href="#32d9e95f00ee666c09c6aa675993f5e25887ecaa">

build_simple.sh

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<a href="#ba308c53c268704c3008f5e2e6e8129f9f6bf3fe">

src/ChangeLog

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<a href="#f76380e3e66f9453de89e5ac198478544cf1e6e4">

src/align/align.cpp

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<a href="#f1fae2471d3aa9a609a9966be5b7ab4c0f58fa75">

src/align/align.h

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<a href="#c8d7bd122d50035cfb1627dbd9659f00b8137ded">

src/align/banded_swipe_pipeline.cpp

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<a href="#60c8f024f9cd9c232531c7af894abe05fbc10179">

src/align/extend_ungapped.h

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<li class="file-stats">

<a href="#6680d5fa25d641cc5dca7c5a7003df5e6724affc">

src/align/greedy_pipeline.cpp

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<a href="#bcbb7a1c70650f87f552b2d9af114f56ce1cbe97">

src/align/query_mapper.cpp

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<a href="#1d6f489bed314aa9dc04402c527ab01ca83d62f6">

src/align/query_mapper.h

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<a href="#633a6c17b2a98479834558229cc20e2ad3de2c8d">

src/align/swipe_pipeline.cpp

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<a href="#76d5a97c09cca591280144de40f9c04a5ec57ef7">

src/basic/basic.cpp

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<a href="#fe8c534c15ea9cf93547993244c3ab903c4895ff">

src/basic/config.cpp

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<a href="#79a175a8b141cc4f06683108fcd39b79a555f1cd">

src/basic/config.h

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<a href="#da280a51d91809345347036c4e31920b2c744ab7">

src/basic/const.h

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<li class="file-stats">

<a href="#67a4682d5d2875c1c9fd5d4af1462dad844cba29">

src/basic/diagonal_segment.h

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<li class="file-stats">

<a href="#80dc9ea59410b77519d86244d5b42337fb185f2f">

src/basic/hssp.cpp

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<a href="#992408bab41b605763e629e7a719178aef609bae">

src/basic/masking.cpp

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<a href="#e64142605ff8612313a434ebbb47a669146a4d86">

src/basic/masking.h

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<li class="file-stats">

<a href="#f9492756ecc3a6486c8d8a74972ab3c60ae604a2">

src/basic/match.h

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<li class="file-stats">

<a href="#0ede537afea69d82dc188cfda9284c8a6625754f">

src/basic/packed_loc.h

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<li class="file-stats">

<a href="#9a54283994ee89733bb9aa7928988b3110b0993c">

src/basic/packed_sequence.h

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<li class="file-stats">

<a href="#27a8e360958ba8ac7bc89efa21bddfdd10635225">

src/basic/packed_transcript.h

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<li class="file-stats">

<a href="#197fc5f508fe7114a8d6969239ca21465d4ed6d3">

src/basic/parameters.h

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<li class="file-stats">

<a href="#3acb533977ddcbc123b4fc5fa6a1f7d171564189">

src/basic/reduction.h

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<h5>The diff was not included because it is too large.</h5>

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