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<h3>
Michael R. Crusoe pushed to branch master
at <a href="https://salsa.debian.org/med-team/seqan2">Debian Med / seqan2</a>
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<h4>
Commits:
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<ul>
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<strong><a href="https://salsa.debian.org/med-team/seqan2/commit/aebeb22264f6219e76473967cc5caa131aac65e6">aebeb222</a></strong>
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<span>by Michael R. Crusoe</span>
<i>at 2019-01-02T12:28:56Z</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Fix thread wait assembly for IA64.
</pre>
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<h4>3 changed files:</h4>
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<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
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+
debian/patches/ia64_yield
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<a href="#bc34014ab4b9a49dd7a27bdd8d352912607c3a96">
debian/patches/series
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<h4>Changes:</h4>
<li id="9c96da0e9f91d7d8937b69b524702c106258f0d1">
<a href="https://salsa.debian.org/med-team/seqan2/commit/aebeb22264f6219e76473967cc5caa131aac65e6#9c96da0e9f91d7d8937b69b524702c106258f0d1"><strong>debian/changelog</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">seqan2 (2.4.0+dfsg-10) UNRELEASED; urgency=medium</span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext"> * debian/patches/ia64_yield: Fix thread wait assembly for IA64.</span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext"> Closes: #890185</span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"> -- Michael R. Crusoe <michael.crusoe@gmail.com> Wed, 02 Jan 2019 03:47:37 -0800</span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext">seqan2 (2.4.0+dfsg-9) unstable; urgency=medium</span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext"> [ Michael R. Crusoe ]</span>
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<li id="edaa8a0713f071e327c8cb55d66ec23481b828e1">
<a href="https://salsa.debian.org/med-team/seqan2/commit/aebeb22264f6219e76473967cc5caa131aac65e6#edaa8a0713f071e327c8cb55d66ec23481b828e1"><strong>debian/patches/ia64_yield</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="diff">From: Michael R. Crusoe <michael.crusoe@gmail.com></span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="diff">Subject: Fix thread wait for IA64</span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- seqan2.orig/include/seqan/parallel/parallel_lock.h</span></span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ seqan2/include/seqan/parallel/parallel_lock.h</span></span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="diff"><span class="gu" style="color: #800080; font-weight: 600;">@@ -233,6 +233,8 @@</span></span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="diff"> __asm__ __volatile__ ("or 27,27,27" ::: "memory");</span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="diff"> #elif defined(__SSE2__) // AMD and Intel</span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="diff"> _mm_pause();</span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#elif defined(__ia64__) // IA64</span></span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ __asm__ __volatile__ ("hint @pause");</span></span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="diff"> #else // everything else.</span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="diff"> asm volatile ("nop" ::: "memory"); // default operation - does nothing => Might lead to passive spinning.</span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="diff"> #endif</span></pre>
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<a href="https://salsa.debian.org/med-team/seqan2/commit/aebeb22264f6219e76473967cc5caa131aac65e6#bc34014ab4b9a49dd7a27bdd8d352912607c3a96"><strong>debian/patches/series</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -7,3 +7,4 @@ install_fiona_illumina</td>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext">ctdVersion.patch</span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext">fix_manpage_formatting.patch</span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext">no-unaligned-access.patch</span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="plaintext">ia64_yield</span></pre>
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