<!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.0 Transitional//EN" "http://www.w3.org/TR/REC-html40/loose.dtd">
<html lang="en">
<head>
<meta content="text/html; charset=utf-8" http-equiv="Content-Type">
<title>
GitLab
</title>
<style>img {
max-width: 100%; height: auto;
}
</style>
</head>
<body>
<div class="content">
<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/nanopolish">Debian Med / nanopolish</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/nanopolish/commit/64e79bf282fc4c2aaad5fe45bfac8226b79d97bd">64e79bf2</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2019-01-24T06:33:42Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 0.11.0</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/nanopolish/commit/25fa0a84dc866e607b148b81c3397f6a966d6b48">25fa0a84</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2019-01-24T06:33:58Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/0.11.0'
Update to upstream version '0.11.0'
with Debian dir 3abe3f553c84a18015684ca2271cdb17018e706d</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/nanopolish/commit/00e66d1366f9bd696a51622fbc2e06ac73d6c05c">00e66d13</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2019-01-24T06:33:58Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/nanopolish/commit/adaf5c2af523ad5737e8c3763c058f0a4e7f7558">adaf5c2a</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2019-01-24T06:33:58Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">debhelper 12
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/nanopolish/commit/db9e04458a53d9e343adbb3eb55d16b7f38557f6">db9e0445</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2019-01-24T06:34:40Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Standards-Version: 4.3.0
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/nanopolish/commit/539f8bc63d9c510480db2001ea4e2ba35241deb7">539f8bc6</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2019-01-24T07:02:32Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Adapt patches
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/nanopolish/commit/84025de2e6f791ffc0311755e91de88868d75743">84025de2</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2019-01-24T07:12:03Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Fix permissions
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/nanopolish/commit/f68a3b3e399b97e9f97b0931ea96b4f2476945a2">f68a3b3e</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2019-01-24T07:16:51Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Fix path for Python interpreter
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/nanopolish/commit/57c9e5ddde4e671439d61a2293f7717a2ea8bb57">57c9e5dd</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2019-01-24T08:11:14Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Better care for Python scripts
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/nanopolish/commit/696d7a4d3c32ae00073ea54a4df4571a185ce858">696d7a4d</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2019-01-24T08:16:27Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Upload to unstable
</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#dea01dd89a3b602828e630677fde5d77c06441c8">
.travis.yml
</a>
</li>
<li class="file-stats">
<a href="#836efb6e25a091dcb4ff8e1dbb2f0be6a5cbf14c">
Makefile
</a>
</li>
<li class="file-stats">
<a href="#8ec9a00bfd09b3190ac6b22251dbb1aa95a0579d">
README.md
</a>
</li>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#78fd675df1cf8c2d4c62ae1a9a912d15c8c50ba4">
debian/compat
</a>
</li>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
</a>
</li>
<li class="file-stats">
<a href="#ceda9c89e9ce1eb1cd91cabdbc995cf525eddb63">
<span class="deleted-file">
−
debian/patches/hdf5-groupcheck.patch
</span>
</a>
</li>
<li class="file-stats">
<a href="#76258ff6f1526200cf3fda90e9f37fd9ee4b4364">
debian/patches/reproducible.patch
</a>
</li>
<li class="file-stats">
<a href="#bc34014ab4b9a49dd7a27bdd8d352912607c3a96">
debian/patches/series
</a>
</li>
<li class="file-stats">
<a href="#8756c63497c8dc39f7773438edf53b220c773f67">
debian/rules
</a>
</li>
<li class="file-stats">
<a href="#b533e7cbb3f06e3619863bd2a00e4f83882b3c8e">
<span class="new-file">
+
docs/source/quickstart_polya.rst
</span>
</a>
</li>
<li class="file-stats">
<a href="#429e1529358c118c8a24ba89fb289ddd3fad88d6">
<span class="new-file">
+
etc/r9-models/r9.4_450bps.gpc.6mer.template.model
</span>
</a>
</li>
<li class="file-stats">
<a href="#a354eabac401b7f4ebb3a6bff8bfceafc31d80d9">
scripts/nanopolish_makerange.py
</a>
</li>
<li class="file-stats">
<a href="#64a18d231424dfe0512d5d98702a6936dd2080e2">
src/alignment/nanopolish_eventalign.cpp
</a>
</li>
<li class="file-stats">
<a href="#10a288b7d12780ba9b509b77643a7f1d133f8a2a">
<span class="new-file">
+
src/builtin_models/r9_4_450bps_gpc_6mer_template_model.inl
</span>
</a>
</li>
<li class="file-stats">
<a href="#63a5131b4e7d1b5ad9842ac4e7b43e6cefaba190">
src/common/nanopolish_alphabet.cpp
</a>
</li>
<li class="file-stats">
<a href="#2c2d378f3c858273fcc789072d022d51957e8a98">
src/common/nanopolish_alphabet.h
</a>
</li>
<li class="file-stats">
<a href="#58a43c64ead5187f569b28ec5ca98b313c48d7c7">
src/common/nanopolish_common.h
</a>
</li>
<li class="file-stats">
<a href="#af0c7b92cdf7a0cc7d98c3103b7fba80623a54e1">
src/common/nanopolish_fast5_io.cpp
</a>
</li>
<li class="file-stats">
<a href="#a6b650afca4ceb444770725cd6e17939daeec862">
src/common/nanopolish_fast5_io.h
</a>
</li>
<li class="file-stats">
<a href="#149ac5b0310ff017664f0645808befe6bda2ed83">
src/common/nanopolish_variant.cpp
</a>
</li>
<li class="file-stats">
<a href="#125985123a25635dc9e1a81a7b2849a0f12aa286">
src/nanopolish_call_methylation.cpp
</a>
</li>
<li class="file-stats">
<a href="#2d62e059707d17d6d88d86a4af4fce9c4c482e3d">
src/nanopolish_index.cpp
</a>
</li>
<li class="file-stats">
<a href="#9e1d6734082431b228580bb425603ab97d4c9d1d">
src/nanopolish_methyltrain.cpp
</a>
</li>
<li class="file-stats">
<a href="#a9c87dc87f669219ca843a7b27aba683ef12b563">
src/nanopolish_raw_loader.cpp
</a>
</li>
<li class="file-stats">
<a href="#7c87ffe15195ab460f3be130ef4d8324408853f0">
src/nanopolish_read_db.cpp
</a>
</li>
<li class="file-stats">
<a href="#244f2077b9e28a5e6394deda0b7574b0f80f501c">
src/nanopolish_squiggle_read.cpp
</a>
</li>
<li class="file-stats">
<a href="#0cd5a7898ca2515cf6be03b2013fef5dda71d2cd">
src/nanopolish_squiggle_read.h
</a>
</li>
<li class="file-stats">
<a href="#8a4594db09bdbd5859ea2b82ef08bae7e6cb4eba">
src/nanopolish_vcf2fasta.cpp
</a>
</li>
<li class="file-stats">
<a href="#9186045b065422025ead086f2c07e4e27cd22c5e">
src/pore_model/nanopolish_builtin_models.h
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
<div class="footer" style="margin-top: 10px;">
<p style="font-size: small; color: #777777;">
—
<br>
<a href="https://salsa.debian.org/med-team/nanopolish/compare/57b47776f93594c9f4d5eadb5a395968d1f69942...696d7a4d3c32ae00073ea54a4df4571a185ce858">View it on GitLab</a>.
<br>
You're receiving this email because of your account on salsa.debian.org.
If you'd like to receive fewer emails, you can
adjust your notification settings.
</p>
</div>
</body>
</html>