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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/seqan2">Debian Med / seqan2</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/seqan2/commit/cc4860c26959c6951b7e731b40cdfa111366b9e7">cc4860c2</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2019-01-29T21:36:33Z</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">debhelper 12
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/seqan2/commit/07dc714d0684b9b9a298238c87b704fd465097b6">07dc714d</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2019-01-29T21:38:29Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Standards-Version: 4.3.0
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</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/seqan2/commit/e3d452ea48fb9aeb4f90b96650acc4af096f6095">e3d452ea</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2019-01-30T10:08:38Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Document reson for exclusion of tests
</pre>
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<li>
<strong><a href="https://salsa.debian.org/med-team/seqan2/commit/d19c2803a500cc933499ac54f7e19202608dccbb">d19c2803</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2019-01-30T12:08:01Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Upload to unstable
</pre>
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<h4>4 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#78fd675df1cf8c2d4c62ae1a9a912d15c8c50ba4">
debian/compat
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<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
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<li class="file-stats">
<a href="#8756c63497c8dc39f7773438edf53b220c773f67">
debian/rules
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<h4>Changes:</h4>
<li id="9c96da0e9f91d7d8937b69b524702c106258f0d1">
<a href="https://salsa.debian.org/med-team/seqan2/compare/4e307f7f0daa60774739f2c3ba8c42a4d7bb95ed...d19c2803a500cc933499ac54f7e19202608dccbb#9c96da0e9f91d7d8937b69b524702c106258f0d1"><strong>debian/changelog</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">seqan2 (2.4.0+dfsg-10) <span class="idiff left right">UNRELEASED</span>; urgency=medium</span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">seqan2 (2.4.0+dfsg-10) <span class="idiff left right">unstable</span>; urgency=medium</span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext"></span>
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<td class="line_content noteable_line" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext"> [ Michael R. Crusoe ]</span>
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<td class="line_content noteable_line" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext"> * debian/patches/ia64_yield: Fix thread wait assembly for IA64.</span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="7" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -7,8 +7,10 @@ seqan2 (2.4.0+dfsg-10) UNRELEASED; urgency=medium</td>
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<td class="line_content noteable_line" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext"> [ Andreas Tille ]</span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext"> * Ignore two tests on armhf and one test on mips to let the build</span>
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<td class="diff-line-num old_line" data-linenumber="9" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext"> succeed on these architectures</span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="plaintext"> * debhelper 12</span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="plaintext"> * Standards-Version: 4.3.0</span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC11" class="line" lang="plaintext"> -- Andreas Tille <tille@debian.org> Tue, 29 Jan 2019 22:3<span class="idiff left right">4:34</span> +0100</span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="plaintext"> -- Andreas Tille <tille@debian.org> Tue, 29 Jan 2019 22:3<span class="idiff left right">8:30</span> +0100</span>
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC15" class="line" lang="plaintext">seqan2 (2.4.0+dfsg-9) unstable; urgency=medium</span>
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<pre style="margin: 0;"> <span id="LC16" class="line" lang="plaintext"></span>
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<li id="78fd675df1cf8c2d4c62ae1a9a912d15c8c50ba4">
<a href="https://salsa.debian.org/med-team/seqan2/compare/4e307f7f0daa60774739f2c3ba8c42a4d7bb95ed...d19c2803a500cc933499ac54f7e19202608dccbb#78fd675df1cf8c2d4c62ae1a9a912d15c8c50ba4"><strong>debian/compat</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">1<span class="idiff left right">1</span></span></pre>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">1<span class="idiff left right">2</span></span></pre>
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<li id="58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
<a href="https://salsa.debian.org/med-team/seqan2/compare/4e307f7f0daa60774739f2c3ba8c42a4d7bb95ed...d19c2803a500cc933499ac54f7e19202608dccbb#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2"><strong>debian/control</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -5,7 +5,7 @@ Uploaders: Andreas Tille <tille@debian.org>,</td>
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5
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext"> Kevin Murray <spam@kdmurray.id.au></span>
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6
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6
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext">Section: science</span>
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7
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7
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext">Priority: optional</span>
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8
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<pre style="margin: 0;">-<span id="LC8" class="line" lang="plaintext">Build-Depends: debhelper (>= 1<span class="idiff left right">1</span>~),</span>
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8
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext">Build-Depends: debhelper (>= 1<span class="idiff left right">2</span>~),</span>
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9
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9
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext"> python,</span>
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10
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10
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext"> cmake,</span>
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11
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11
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="plaintext"> fakeroot</span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="15" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="15" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -15,7 +15,7 @@ Build-Depends-Arch: zlib1g-dev,</td>
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15
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15
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<pre style="margin: 0;"> <span id="LC15" class="line" lang="plaintext"> libboost-dev,</span>
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16
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16
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<pre style="margin: 0;"> <span id="LC16" class="line" lang="plaintext"> help2man,</span>
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17
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17
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<pre style="margin: 0;"> <span id="LC17" class="line" lang="plaintext"> ctdconverter</span>
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18
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<pre style="margin: 0;">-<span id="LC18" class="line" lang="plaintext">Standards-Version: 4.<span class="idiff left right">2.1</span></span>
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18
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="plaintext">Standards-Version: 4.<span class="idiff left right">3.0</span></span>
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19
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<pre style="margin: 0;"> <span id="LC19" class="line" lang="plaintext">Vcs-Browser: https://salsa.debian.org/med-team/seqan2</span>
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20
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<pre style="margin: 0;"> <span id="LC20" class="line" lang="plaintext">Vcs-Git: https://salsa.debian.org/med-team/seqan2.git</span>
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21
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<pre style="margin: 0;"> <span id="LC21" class="line" lang="plaintext">Homepage: http://www.seqan.de/</span>
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<li id="8756c63497c8dc39f7773438edf53b220c773f67">
<a href="https://salsa.debian.org/med-team/seqan2/compare/4e307f7f0daa60774739f2c3ba8c42a4d7bb95ed...d19c2803a500cc933499ac54f7e19202608dccbb#8756c63497c8dc39f7773438edf53b220c773f67"><strong>debian/rules</strong></a>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="44" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -44,12 +44,17 @@ pkgdev=libseqan2-dev</td>
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44
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44
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<pre style="margin: 0;"> <span id="LC44" class="line" lang="plaintext"></span>
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45
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<pre style="margin: 0;"> <span id="LC45" class="line" lang="plaintext">override_dh_auto_configure-arch:</span>
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46
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<pre style="margin: 0;"> <span id="LC46" class="line" lang="plaintext">ifeq ($(DEB_HOST_ARCH),armhf)</span>
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<pre style="margin: 0;">+<span id="LC47" class="line" lang="plaintext"> # The following tests FAILED:</span>
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<pre style="margin: 0;">+<span id="LC48" class="line" lang="plaintext"> # 46 - test_test_index_crosscompare_dna (Bus error)</span>
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49
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<pre style="margin: 0;">+<span id="LC49" class="line" lang="plaintext"> # 52 - test_test_index_fm_rank_dictionary (Bus error)</span>
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47
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50
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<pre style="margin: 0;"> <span id="LC50" class="line" lang="plaintext"> sed -i \</span>
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48
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<pre style="margin: 0;"> <span id="LC51" class="line" lang="plaintext"> -e 'g/ test_test_index_crosscompare_dna /d' \</span>
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<pre style="margin: 0;"> <span id="LC52" class="line" lang="plaintext"> -e 'g/ test_test_index_fm_rank_dictionary //d' \</span>
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<pre style="margin: 0;"> <span id="LC53" class="line" lang="plaintext"> tests/index/CMakeLists.txt</span>
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<pre style="margin: 0;"> <span id="LC54" class="line" lang="plaintext">endif</span>
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<pre style="margin: 0;"> <span id="LC55" class="line" lang="plaintext">ifeq ($(DEB_HOST_ARCH),mips)</span>
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<pre style="margin: 0;">+<span id="LC56" class="line" lang="plaintext"> # The following tests FAILED:</span>
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<pre style="margin: 0;">+<span id="LC57" class="line" lang="plaintext"> # 7 - test_align_parallel_data_structures (Child aborted)</span>
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<pre style="margin: 0;"> <span id="LC58" class="line" lang="plaintext"> sed -i \</span>
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<pre style="margin: 0;"> <span id="LC59" class="line" lang="plaintext"> -e 'g/ test_align_parallel_data_structures /d' \</span>
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<pre style="margin: 0;"> <span id="LC60" class="line" lang="plaintext"> tests/index/CMakeLists.txt</span>
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