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<h3>
Andreas Tille pushed to branch upstream
at <a href="https://salsa.debian.org/med-team/mothur">Debian Med / mothur</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/mothur/commit/715111a9e1b1073203f065f159b961b5840546c7">715111a9</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2019-01-29T21:51:45Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 1.41.21</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#b2270542d41297db1ee0d12698e609ea3ec25ce7">
INSTALL.md
</a>
</li>
<li class="file-stats">
<a href="#836efb6e25a091dcb4ff8e1dbb2f0be6a5cbf14c">
Makefile
</a>
</li>
<li class="file-stats">
<a href="#8b67dc09b93b38e95da2a54036fa1db5b207cc5b">
Mothur.xcodeproj/project.pbxproj
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<li class="file-stats">
<a href="#06d2aaf9fb93b3895e7dc78f8dfb146a6e2d4775">
<span class="deleted-file">
−
TestMothur/IntegrationTests/454sop.cpp
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<li class="file-stats">
<a href="#d39622badde35c2d74af49bcabc46f0a3c74f6c3">
<span class="deleted-file">
−
TestMothur/IntegrationTests/miseqsop.cpp
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<li class="file-stats">
<a href="#349e45681551c81c3edb9ee02178f837bd8846d8">
<span class="deleted-file">
−
TestMothur/IntegrationTests/testintegrationalignseqs.cpp
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<li class="file-stats">
<a href="#092907fa912fc0179309dd99b8b363d1800cf7f3">
<span class="deleted-file">
−
TestMothur/IntegrationTests/testintegrationalignseqs.hpp
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<li class="file-stats">
<a href="#b2511acd5a71e24e0557e10936ea7703a3ea0bea">
<span class="new-file">
+
TestMothur/catch.hpp
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<li class="file-stats">
<a href="#3d2be9b6dc155afbdfdae99a138869afc67a4e0e">
TestMothur/dataset.cpp
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<li class="file-stats">
<a href="#8ae6e25dd342c18d933158a720005b4fb57b38e3">
TestMothur/dataset.h
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<li class="file-stats">
<a href="#9531f55c7e91b38686e499466bf572b2c73177fc">
TestMothur/testcommands/testrenamefilecommand.cpp
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<li class="file-stats">
<a href="#a60191413051167c70b0ef4aeda19696473d09a4">
<span class="new-file">
+
TestMothur/testcontainers/testcounttable.cpp
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<li class="file-stats">
<a href="#559f2095207a238e087ddf0d11bb66aab8fc6347">
TestMothur/IntegrationTests/miseqsop.hpp
→
TestMothur/testcontainers/testcounttable.hpp
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<li class="file-stats">
<a href="#101f57aafa47256e8aa32e9c3c7a81038e18e0e0">
TestMothur/testoptirefmatrix.cpp
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<li class="file-stats">
<a href="#5f3e00fe6953ad4eab413f77977e8d235ee793a9">
<span class="new-file">
+
TestMothur/testsubsample.cpp
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<li class="file-stats">
<a href="#b2ea74090e23c9615ed0c936f7e334c116c11d4b">
TestMothur/IntegrationTests/454sop.hpp
→
TestMothur/testsubsample.hpp
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<li class="file-stats">
<a href="#3b5389b41bae35f207850a8e95425fe4ba792259">
makefile-internal
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<li class="file-stats">
<a href="#e3eabe1149596d8ac29023d547b1675ddbb773ed">
source/calculators/ace.cpp
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<li class="file-stats">
<a href="#4ee8dcd893c0446ac309518bb374647cdc5bb70d">
source/calculators/boneh.cpp
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<li class="file-stats">
<a href="#cc02ccabb83842cbf73868a1dca19cd75f1c82a6">
source/calculators/calculator.h
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<li class="file-stats">
<a href="#d4dc41ab42bbfb1fc8760c697299f0e44aa06e5b">
source/calculators/chao1.cpp
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<li class="file-stats">
<a href="#48cd00ffff74cba99a9f9e4735bb93ae9ea417c4">
source/calculators/gower.cpp
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<li class="file-stats">
<a href="#664bfb6cb8f9bc3be79ad0dc26cc905569a3e0df">
source/calculators/invsimpson.cpp
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<li class="file-stats">
<a href="#5beb21bad7ca14e9883d959216bdec861f40c285">
source/calculators/mempearson.cpp
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<li class="file-stats">
<a href="#e100b38f9f5007559a88f449ca28250f11c2c0f6">
source/calculators/sharedace.cpp
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<li class="file-stats">
<a href="#d2c181e9953fc643978f846c8359779cc757b174">
source/calculators/sharedanderbergs.cpp
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</li>
<li class="file-stats">
<a href="#aee8b8554583bd9f03aa51fd0430dadc40cefce5">
source/calculators/sharedchao1.cpp
</a>
</li>
<li class="file-stats">
<a href="#a779d18e823f811913bcdc1de53faebad1d82db6">
source/calculators/sharedjackknife.cpp
</a>
</li>
<li class="file-stats">
<a href="#ebad30171308c0962b45c5e557e42194c4d749bb">
source/calculators/sharedjclass.cpp
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</li>
<li class="file-stats">
<a href="#f20a0ac5ff974842e670e19442721b6a56a8d64c">
source/calculators/sharedjsd.cpp
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</ul>
<h5>The diff was not included because it is too large.</h5>
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