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GitLab
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<h3>
Olivier Sallou pushed to branch master
at <a href="https://salsa.debian.org/med-team/beast2-mcmc">Debian Med / beast2-mcmc</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/beast2-mcmc/commit/5d49e7d86ec7392367c3b334bb6e7d5b78509aef">5d49e7d8</a></strong>
<div>
<span>by Olivier Sallou</span>
<i>at 2019-03-10T16:22:38Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 2.5.2+dfsg</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/beast2-mcmc/commit/dcb45fc361631bece36d8e6dd87a31ae095fa650">dcb45fc3</a></strong>
<div>
<span>by Olivier Sallou</span>
<i>at 2019-03-10T16:22:55Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/2.5.2+dfsg'

Update to upstream version '2.5.2+dfsg'
with Debian dir 744104c174878a08a3f306d5f91320ceec4b9ff7</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/beast2-mcmc/commit/adf5a097e619bf20a16639bd6ca601a2d89754fa">adf5a097</a></strong>
<div>
<span>by Olivier Sallou</span>
<i>at 2019-03-10T16:23:31Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">new upstream release 2.5.2
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/beast2-mcmc/commit/dd7f8677b2ef8287adc08ff7389cc4f670dfafb6">dd7f8677</a></strong>
<div>
<span>by Olivier Sallou</span>
<i>at 2019-03-10T16:26:14Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">refresh patches
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/beast2-mcmc/commit/ca64e229ff799660ad1fe8552687e6e14e5e5bd1">ca64e229</a></strong>
<div>
<span>by Olivier Sallou</span>
<i>at 2019-03-10T16:33:35Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">skip clean as needs patches
</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#bdc348bf75801c527f51cdeddc8edf027f7ef35a">
build.xml
</a>
</li>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#813b27b9f0bc72fb1563e5dcf1ce715410cb3747">
debian/patches/antlr-compatibility.patch
</a>
</li>
<li class="file-stats">
<a href="#5c5b9c6960ee9ecac6229e8f51023781864b8fcb">
debian/patches/remove_appbundler.patch
</a>
</li>
<li class="file-stats">
<a href="#47ab0b4b827e3fe75b18b0fb2004a0b5b99671fe">
debian/patches/remove_mac_only_code.patch
</a>
</li>
<li class="file-stats">
<a href="#8756c63497c8dc39f7773438edf53b220c773f67">
debian/rules
</a>
</li>
<li class="file-stats">
<a href="#f60d4ee90c3e14cf8d2a71bd71396c4fe58fa332">
doc/tutorials/DivergenceDating/DivergenceDatingTutorial.bib
</a>
</li>
<li class="file-stats">
<a href="#d5701dcb1f48658f042f55dad58b8ec71292db6b">
doc/tutorials/EBSP/ebsp2-tut.bib
</a>
</li>
<li class="file-stats">
<a href="#a1249233a97581dfdf366773799b86a84d74be4a">
doc/tutorials/MEPs/MEPs.bib
</a>
</li>
<li class="file-stats">
<a href="#29e45e9e442154aac3f07b0c36a79f29d2185605">
doc/tutorials/STACEY/STACEY_tutorial.bib
</a>
</li>
<li class="file-stats">
<a href="#909829c97d8650b429364d6732c4fb4baea26e06">
doc/tutorials/STARBEAST/StarBEAST_tutorial.bib
</a>
</li>
<li class="file-stats">
<a href="#7d0437d4bc5ef4696db2d10331d63326e05d65cf">
examples/nexus/humanChimpSNP.nex
</a>
</li>
<li class="file-stats">
<a href="#63fcbed0ee47ada1ebdf9861fb9a6e51f1945839">
release/Linux/jrebin/applauncher
</a>
</li>
<li class="file-stats">
<a href="#92aa38a325322114627d8f7ae3d6edf8d674a6d0">
release/Linux/jrebin/beast
</a>
</li>
<li class="file-stats">
<a href="#7c3565858028f0122e0497b2d69642bf06abd759">
release/Linux/jrebin/beauti
</a>
</li>
<li class="file-stats">
<a href="#76520bda8bcaf00d53c6e6bd2a56cb4b19103752">
release/Linux/jrebin/densitree
</a>
</li>
<li class="file-stats">
<a href="#42d0196b1c032810f920025eed25667a64ff356d">
release/Linux/jrebin/loganalyser
</a>
</li>
<li class="file-stats">
<a href="#2a0a04c6778b492bae605ec7bd97b475a9b29f98">
release/Linux/jrebin/logcombiner
</a>
</li>
<li class="file-stats">
<a href="#522585b616a4dfec8146d5805d82cbd38bf7b28e">
release/Linux/jrebin/packagemanager
</a>
</li>
<li class="file-stats">
<a href="#6807ed61382bf6299bbf862428fb393bb7f526c6">
release/Linux/jrebin/treeannotator
</a>
</li>
<li class="file-stats">
<a href="#7c97ccb972e20f2832229b6163f972b2de552fd8">
<span class="new-file">
+
release/Windows/AppLauncher_launch4j_jre2.xml
</span>
</a>
</li>
<li class="file-stats">
<a href="#a75ef931a5e4f2ba48ea47c31ef5b5bb89e3e583">
<span class="new-file">
+
release/Windows/BEAST_launch4j_jre2.xml
</span>
</a>
</li>
<li class="file-stats">
<a href="#00ae3cdbc6e865391f2d9e1571f6bb84d5fbcdbd">
<span class="new-file">
+
release/Windows/BEAUti_launch4j_jre2.xml
</span>
</a>
</li>
<li class="file-stats">
<a href="#0bdb92c45bab2bdea1b877e5238dbcff710288e1">
<span class="new-file">
+
release/Windows/LogCombiner_launch4j_jre2.xml
</span>
</a>
</li>
<li class="file-stats">
<a href="#5c60182c3b54f85378e594bb4e388ca356e41f55">
<span class="new-file">
+
release/Windows/TreeAnnotator_launch4j_jre2.xml
</span>
</a>
</li>
<li class="file-stats">
<a href="#16c9d4eece15f5ce2896ef371662e5fa25789a78">
src/beast/app/BEASTVersion.java
</a>
</li>
<li class="file-stats">
<a href="#e1ec9fa6f50d77f0722a5e0697f87c368dcb80d5">
src/beast/app/BEASTVersion2.java
</a>
</li>
<li class="file-stats">
<a href="#5bfd7d5eae790c3aae520b5462cf8e361c44e0eb">
src/beast/app/DocMaker.java
</a>
</li>
<li class="file-stats">
<a href="#00f96cbd9bcc8fabcc2e2dddcc85f3de38adf8e9">
src/beast/app/beastapp/BeastLauncher.java
</a>
</li>
<li class="file-stats">
<a href="#9d3a2675e58065df81492d9e1b44da989373da0b">
src/beast/app/beauti/Beauti.java
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>

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