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<h3>
Sascha Steinbiss pushed to branch master
at <a href="https://salsa.debian.org/med-team/rna-star">Debian Med / rna-star</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/rna-star/commit/f6217918c166a2f3fc30a7d7fb7a99600f10bf0a">f6217918</a></strong>
<div>
<span>by Sascha Steinbiss</span>
<i>at 2019-07-08T15:28:39Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 2.7.1a+dfsg</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/rna-star/commit/55cb137269d39ccbe1e708360400e923edbcfa13">55cb1372</a></strong>
<div>
<span>by Sascha Steinbiss</span>
<i>at 2019-07-08T15:28:40Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Merge tag 'upstream/2.7.1a+dfsg'
Upstream version 2.7.1a+dfsg
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/rna-star/commit/a5f5043030ddad3c0fe3aa31e80279fa20ea8fd2">a5f50430</a></strong>
<div>
<span>by Sascha Steinbiss</span>
<i>at 2019-07-08T15:38:15Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">new upstream release
</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#7facec255884dc55d3818e4dfbea89b1bdd7f49e">
CHANGES.md
</a>
</li>
<li class="file-stats">
<a href="#8ec9a00bfd09b3190ac6b22251dbb1aa95a0579d">
README.md
</a>
</li>
<li class="file-stats">
<a href="#fb1b39277cfb15327cea71551d0bbf7643e216f4">
RELEASEnotes.md
</a>
</li>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
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<li class="file-stats">
<a href="#e15fe6a3aa4284cb8b1685bd77b426cd5fbd7737">
debian/patches/donotuse_own_htslib.patch
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<li class="file-stats">
<a href="#1d6ebb42152a3125296c8f3df8bc34651da72448">
doc/STARmanual.pdf
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<li class="file-stats">
<a href="#5a5668ccb427693fe0e7ea2e054229206cb91b0a">
extras/doc-latex/STARmanual.tex
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<li class="file-stats">
<a href="#157cd6d9047e6c04e2c099a71f167a5214eba375">
extras/doc-latex/convertParDefToLatexTable.awk
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<li class="file-stats">
<a href="#dd357fd519066773532862e75ebb9276945c8fe5">
extras/doc-latex/parametersDefault.tex
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<li class="file-stats">
<a href="#8955c7301dc01c7f9b2a350f2aee6066e91f8f83">
extras/docker/Dockerfile
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<li class="file-stats">
<a href="#1e5b4c1f1f6aa726b81044bc456a57d6b5ae614b">
source/BAMbinSortByCoordinate.cpp
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<li class="file-stats">
<a href="#2ae4914dbcb1efeb17d11c457772c8c2308eb7c1">
source/BAMbinSortUnmapped.cpp
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<li class="file-stats">
<a href="#60393688a34fc5924326daa0522f7fbff5ff077a">
source/Chain.cpp
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<li class="file-stats">
<a href="#65610483a03ecd73b792fab739f9d0457481418f">
source/Chain.h
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<li class="file-stats">
<a href="#17ef85fa9dc8f604b874c27ab2bc5d31a69f0d6d">
source/ChimericAlign.cpp
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<li class="file-stats">
<a href="#a6ffa0e1a002e87767829734d1828c550173c14f">
source/ChimericAlign.h
</a>
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<li class="file-stats">
<a href="#c246a3fe5d9a232194b8e707458c60d63211b000">
source/ChimericAlign_chimericJunctionOutput.cpp
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<li class="file-stats">
<a href="#e5c1c806139fc32224b4bec6613de542758c28c3">
source/ChimericAlign_chimericStitching.cpp
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<li class="file-stats">
<a href="#3ceff442a9e2d0cccb7493ea77170f2b33f3737a">
source/ChimericDetection.cpp
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</li>
<li class="file-stats">
<a href="#40b7d10e4645dc6ae30e5830f3b8abe35c537374">
source/ChimericDetection.h
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</li>
<li class="file-stats">
<a href="#e6c66b50a9609f09ee3fe8ac72c75014ae38c1ff">
source/ChimericDetection_chimericDetectionMult.cpp
</a>
</li>
<li class="file-stats">
<a href="#b336f9bf0e97f6c0844f2dbaf5e9794543ff0ba6">
source/ChimericSegment.cpp
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</li>
<li class="file-stats">
<a href="#1bfa3d391ad3569bd22ef059359913699f103225">
source/ChimericSegment.h
</a>
</li>
<li class="file-stats">
<a href="#e4e001863e56a52fbb2f4c1280bcb47ac618fce0">
source/ChimericTranscript.h
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</li>
<li class="file-stats">
<a href="#165858b6de35f6f7c794dcfe8e28a97119310ec8">
source/ErrorWarning.cpp
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<li class="file-stats">
<a href="#02895d32e310d889226b48cb80f060a23a357d44">
source/ErrorWarning.h
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<li class="file-stats">
<a href="#385d57a3ccf42a0b7462635b147b385a25e91797">
source/Genome.cpp
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</li>
<li class="file-stats">
<a href="#3b3dcc63f931c5db1862b61467a733972f52de53">
source/Genome.h
</a>
</li>
<li class="file-stats">
<a href="#f4eb1c9c89d8a6664c03d29afd21f3104689a8d9">
source/Genome_genomeGenerate.cpp
</a>
</li>
<li class="file-stats">
<a href="#3dd18c58e883d173d2b5fed252bbe1a9c5ea0a04">
source/InOutStreams.cpp
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
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