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<h3>
Dylan Aïssi pushed to branch master
at <a href="https://salsa.debian.org/med-team/snakemake">Debian Med / snakemake</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/snakemake/commit/39a63878d466514695e974e3e95b06a0a12bbb0c">39a63878</a></strong>
<div>
<span>by Dylan Aïssi</span>
<i>at 2019-07-12T18:37:22Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 5.5.3</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/snakemake/commit/ebe0d541c86992d59cf9048e9389488f0b14d0d3">ebe0d541</a></strong>
<div>
<span>by Dylan Aïssi</span>
<i>at 2019-07-12T18:37:27Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/5.5.3'
Update to upstream version '5.5.3'
with Debian dir 51e7eea23cc6d3e063970016566d6bf349340994</pre>
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</ul>
<h4>30 changed files:</h4>
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<li class="file-stats">
<a href="#fd5da61396a8376845bee5cdf71aaf3c98a888ae">
.circleci/config.yml
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<li class="file-stats">
<a href="#81ccd5c4e1f93eb3ab80c73b5532455bf4f82fe9">
<span class="new-file">
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.readthedocs.yml
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<li class="file-stats">
<a href="#45267e3a9556cafa9cb7b61dab7a3b6659e73aad">
CHANGELOG.rst
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<li class="file-stats">
<a href="#1f5208c48761240351812af26bac8e1c55204276">
<span class="new-file">
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doc-environment.yml
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<li class="file-stats">
<a href="#b549da0cfb896a52347851186f254ac21acab8c6">
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docs/api_reference/internal/modules.rst
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<li class="file-stats">
<a href="#314bec9b1a3cd5a888d10e21f1edf108db7409d6">
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docs/api_reference/internal/snakemake.remote.rst
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<a href="#b75fb2df0f98e5d5f949910a62d04966b78a4002">
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docs/api_reference/internal/snakemake.report.rst
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<li class="file-stats">
<a href="#7c02cfeddbb849a7d3989c2f6c60860eb28e373d">
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docs/api_reference/internal/snakemake.rst
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<li class="file-stats">
<a href="#9617ea0d5d1a492cd381dd6bb688b8a5cbe6512b">
docs/getting_started/installation.rst
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<a href="#d0153cac95479af9bfb99b746b633bc8255bb53a">
docs/index.rst
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<a href="#cc31921d407405d25ab3b66029cd6f032441fd24">
docs/project_info/contributing.rst
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<a href="#271b54d579b58b0097c7c56b8ab060c6e3a67b4f">
docs/requirements.txt
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<a href="#dfeb7b6e739ba66056c1799c63a5a39c7698b59f">
docs/snakefiles/rules.rst
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<a href="#6e44c81569e59fa3a94e1cf4a660f38c9fe5ca24">
docs/tutorial/additional_features.rst
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<a href="#a64f4e86841a3aed0cd5f5ec9d71431086ea0014">
docs/tutorial/advanced.rst
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<a href="#7f695df9a93bb6d2f47c562fd1282181e830528b">
docs/tutorial/basics.rst
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<li class="file-stats">
<a href="#8e2edce0d507e1297474f25c00cae94258db38d8">
setup.py
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<li class="file-stats">
<a href="#d366205d7cd679ff6d4a61f70728e92537101763">
snakemake/__init__.py
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<li class="file-stats">
<a href="#5e16cbeea010f59dbef52f8950f4873c94f39c7e">
snakemake/_version.py
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<li class="file-stats">
<a href="#df4be91675a0ec494b4883d845ec77d630aa9b66">
snakemake/common.py
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<li class="file-stats">
<a href="#cc2e928f15e341aa118531053338930d0d215b9d">
snakemake/conda.py
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<li class="file-stats">
<a href="#9821437dfb3fff8383b6066a2a3c7aa3f6712a32">
snakemake/dag.py
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<li class="file-stats">
<a href="#f26ea241de6ff4cfc0be3675c4f2da7114bd889d">
snakemake/exceptions.py
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<li class="file-stats">
<a href="#1dba76c2cca537b789f8754f5ddbed5dc36c6dee">
snakemake/executors.py
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<li class="file-stats">
<a href="#e933119c7503fe1d48ce0b0d37492388705f5808">
snakemake/io.py
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<li class="file-stats">
<a href="#818384818c4671b8354b6eb98ee2bab61c015a74">
snakemake/jobs.py
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<li class="file-stats">
<a href="#6c195c1be80e4ad60b55a5a06c27411c43bbc217">
snakemake/logging.py
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<li class="file-stats">
<a href="#d70c11793454d64a7b2d77ced116226d2f13378e">
snakemake/parser.py
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<li class="file-stats">
<a href="#37945b951dec897845c94629dba3140528dcf147">
snakemake/persistence.py
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<li class="file-stats">
<a href="#42f66aef418aa0a237efebc0601b30a659e59c1e">
snakemake/remote/EGA.py
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</ul>
<h5>The diff was not included because it is too large.</h5>
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