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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/proteinortho">Debian Med / proteinortho</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/proteinortho/commit/65fa490bc361519cdb588b93d26bdd0a51c0ba69">65fa490b</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2019-07-15T11:20:49Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Import changes by Paul Klemm <klemmp@staff.uni-marburg.de> for new upstream version, (Fixed name of manpage)
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/proteinortho/commit/8e1c5f01db442b7047df824e7cbfd9709e12c01b">8e1c5f01</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2019-07-15T11:38:32Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Fix watch file and file exclusions
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/proteinortho/commit/824eb49c9c4a56afb568b541d7fe0b89ff8675fd">824eb49c</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2019-07-15T11:39:08Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 6.0.6+dfsg</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/proteinortho/commit/5b74a87b79a9fd024e9f3978671679feac052bd0">5b74a87b</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2019-07-15T11:39:09Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/6.0.6+dfsg'
Update to upstream version '6.0.6+dfsg'
with Debian dir c579896da24dae7bd0f7308ea3c3c2e9d8e94e98</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/proteinortho/commit/b2fefa21246150773724d77d038698077e119461">b2fefa21</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2019-07-15T11:39:22Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">debhelper 12
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/proteinortho/commit/3807dcf64c8a003e003a53af042eb24e8ac4010f">3807dcf6</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2019-07-15T11:39:23Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Standards-Version: 4.4.0
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/proteinortho/commit/39002aaff3b9a9a3c1da5b08b58065c27d961192">39002aaf</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2019-07-15T12:44:28Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Build-Depends: s/liblapack3/liblapack-dev|libatlas-base-dev|liblapack.so/
</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#a5cc2925ca8258af241be7e5b0381edf30266302">
<span class="new-file">
+
.gitignore
</span>
</a>
</li>
<li class="file-stats">
<a href="#587d266bb27a4dc3022bbed44dfa19849df3044c">
<span class="new-file">
+
.gitlab-ci.yml
</span>
</a>
</li>
<li class="file-stats">
<a href="#1c497fbb3a46b78edf04cc2a2fa33f67e3ffbe2a">
<span class="new-file">
+
CHANGELOG
</span>
</a>
</li>
<li class="file-stats">
<a href="#ff6936350384213d6f693f4d604134188ce088c8">
<span class="new-file">
+
CHANGEUID
</span>
</a>
</li>
<li class="file-stats">
<a href="#0398ccd0f49298b10a3d76a47800d2ebecd49859">
<span class="new-file">
+
LICENSE
</span>
</a>
</li>
<li class="file-stats">
<a href="#836efb6e25a091dcb4ff8e1dbb2f0be6a5cbf14c">
Makefile
</a>
</li>
<li class="file-stats">
<a href="#8ec9a00bfd09b3190ac6b22251dbb1aa95a0579d">
<span class="new-file">
+
README.md
</span>
</a>
</li>
<li class="file-stats">
<a href="#5bffe231979d89933bcd7844bcc8b05cae3232f1">
<span class="deleted-file">
−
debian/bin/proteinortho5
</span>
</a>
</li>
<li class="file-stats">
<a href="#54b1a3292a076de70c3b92082db796f15aac79b7">
<span class="new-file">
+
debian/bin/proteinortho6
</span>
</a>
</li>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#f5f51601866c86e59a004bd93fa415f5675be8c5">
debian/clean
</a>
</li>
<li class="file-stats">
<a href="#78fd675df1cf8c2d4c62ae1a9a912d15c8c50ba4">
debian/compat
</a>
</li>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
</a>
</li>
<li class="file-stats">
<a href="#adb7f75f79e3bb85eb62912a2904c5d24af878fb">
debian/copyright
</a>
</li>
<li class="file-stats">
<a href="#01c8e9d19fcaf265f5f6816e7eddc2163a3d5a04">
debian/proteinortho5.1
→
debian/proteinortho6.1
</a>
</li>
<li class="file-stats">
<a href="#8756c63497c8dc39f7773438edf53b220c773f67">
debian/rules
</a>
</li>
<li class="file-stats">
<a href="#8c77cc51b09ef1f7b294222180bcdb53ebb70e2f">
debian/tests/run-unit-test
</a>
</li>
<li class="file-stats">
<a href="#68ef9f98c01c7eecd4c605cc26048a06f3304b79">
debian/watch
</a>
</li>
<li class="file-stats">
<a href="#98d15038a6223225a50815231f5ae88f1ce2762c">
<span class="new-file">
+
dev/CMakeLists.txt
</span>
</a>
</li>
<li class="file-stats">
<a href="#39689815a29b5ecd080901c827bd9a4457d01df7">
<span class="new-file">
+
dev/blastgraph2CCblastgraphs.cpp
</span>
</a>
</li>
<li class="file-stats">
<a href="#a8e9907448ee348f396180f8532d3af740dea13a">
<span class="new-file">
+
dev/blastgraph2diffBitscoresEvalues.cpp
</span>
</a>
</li>
<li class="file-stats">
<a href="#ecc8781ac17074f257a7d07f2fba0dc50afc0079">
<span class="new-file">
+
dev/blastgraph2ivenn.cpp
</span>
</a>
</li>
<li class="file-stats">
<a href="#6209b561054ce6a0808e0937a76b14f2b0204a07">
<span class="new-file">
+
dev/blastgraph2r.cpp
</span>
</a>
</li>
<li class="file-stats">
<a href="#422b03b5162fcc894d20f89121ed80e6d61688d7">
<span class="new-file">
+
dev/blastgraph2sensitivity.cpp
</span>
</a>
</li>
<li class="file-stats">
<a href="#f89e20e66afc87e5a4a012ae2722e5acf53630f4">
<span class="new-file">
+
dev/blastgraph2upsetr.cpp
</span>
</a>
</li>
<li class="file-stats">
<a href="#c0c8ceae3d6e6f818b840cd12e862e4f91e55274">
tools/check_graph_duplicate_ids.pl
→
dev/check_graph_duplicate_ids.pl
</a>
</li>
<li class="file-stats">
<a href="#a03628f60a292270df65915adc0fa516d1af696d">
<span class="new-file">
+
dev/compileAndRunTests.sh
</span>
</a>
</li>
<li class="file-stats">
<a href="#3cfe778775a3c84625592aa7d365d9bb4279f8bd">
<span class="new-file">
+
dev/compileAndRunTests_testGetConnectivity.sh
</span>
</a>
</li>
<li class="file-stats">
<a href="#172358a26f47e300736349ebc4cfd2c4c13b2ac8">
<span class="new-file">
+
dev/dspevx_test.cpp
</span>
</a>
</li>
<li class="file-stats">
<a href="#a193eb8503d9ca92980658412030971369db47b9">
<span class="new-file">
+
dev/dsyevx_test_laplace.cpp
</span>
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
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<p style="font-size: small; color: #777;">
—
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<a href="https://salsa.debian.org/med-team/proteinortho/compare/ab43ef2c1b22d620b79e272446f004c60177183a...39002aaff3b9a9a3c1da5b08b58065c27d961192">View it on GitLab</a>.
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