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<h3>
Michael R. Crusoe pushed to branch upstream
at <a href="https://salsa.debian.org/med-team/rapmap">Debian Med / rapmap</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/rapmap/commit/100ae745be7ab650c02c1c8080b57652863a258a">100ae745</a></strong>
<div>
<span>by Michael R. Crusoe</span>
<i>at 2019-07-23T10:38:19Z</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 0.14.1+dfsg</pre>
</li>
</ul>
<h4>23 changed files:</h4>
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<li class="file-stats">
<a href="#9a2aa4db38d3115ed60da621e012c0efc0172aae">
CMakeLists.txt
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<li class="file-stats">
<a href="#8ec9a00bfd09b3190ac6b22251dbb1aa95a0579d">
README.md
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<li class="file-stats">
<a href="#34ffb03041dc818ba71da0518ec52a0134f543f8">
<span class="new-file">
+
current_version.txt
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<li class="file-stats">
<a href="#e2c1238c2ad9d2223dfea9a03006ad38ba264508">
include/HitManager.hpp
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</li>
<li class="file-stats">
<a href="#998dceabc952dfb0101bf9f05602e8586446238e">
include/RapMapSAIndex.hpp
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</li>
<li class="file-stats">
<a href="#256d0124695e487afe36d367675d86ce19d986b6">
include/RapMapUtils.hpp
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<li class="file-stats">
<a href="#f105b38304e55dbc88b8c44c7a8ad42c96cb282e">
include/SACollector.hpp
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<li class="file-stats">
<a href="#78505689dab5951044e5f266971ce1d085bf446e">
include/SASearcher.hpp
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<li class="file-stats">
<a href="#9b16c85fde1d159d675b65c002c6870a21435430">
<span class="new-file">
+
include/SelectiveAlignmentUtils.hpp
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<li class="file-stats">
<a href="#4f010a439222bb010669e60b3180cbb86e15fea5">
<span class="new-file">
+
include/edlib.h
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<li class="file-stats">
<a href="#fb230ff37deeab1433d012313deca9eb4ad78929">
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+
include/ksw2pp/KSW2Aligner.hpp
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<li class="file-stats">
<a href="#949b5294638c9467f0b3a9c88602e3f965ddf40c">
<span class="new-file">
+
include/ksw2pp/kalloc.h
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<li class="file-stats">
<a href="#40bf624bb4e86da16e9e69e8a68089680c5b0e14">
<span class="new-file">
+
include/ksw2pp/ksw2.h
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<li class="file-stats">
<a href="#a26413da2eda74a7876cd0e73dec061619b45f69">
<span class="new-file">
+
include/metro/metrohash.h
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<li class="file-stats">
<a href="#4565a6b29b057a0802a2d42f94270dbd14e16147">
<span class="new-file">
+
include/metro/metrohash128.h
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<li class="file-stats">
<a href="#f8382770365397d42262b9f343f0b2077b73d23c">
<span class="new-file">
+
include/metro/metrohash128crc.h
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<li class="file-stats">
<a href="#7ebb571e0270c8d2e7ed0dcd5ba9b5004c6ed1bc">
<span class="new-file">
+
include/metro/metrohash64.h
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<li class="file-stats">
<a href="#629f7d0c500aae5baab66807a5a6f653f6a8c696">
<span class="new-file">
+
include/metro/platform.h
</span>
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</li>
<li class="file-stats">
<a href="#9ac7a64bf360040c48a00048a50cd936a4c3fd19">
<span class="new-file">
+
include/metro/testvector.h
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<li class="file-stats">
<a href="#bd16a88c6a9c29dd5935141e2985395dc7b2ac44">
<span class="new-file">
+
include/nonstd/optional.hpp
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<li class="file-stats">
<a href="#fb0bf6a061820c57f7b4e9079a77f32eead5dd35">
include/sparsepp/spp.h
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<li class="file-stats">
<a href="#f7363f22b6377aafaea2cefc2ac0d2bef4fdb47e">
include/sparsepp/spp_dlalloc.h
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<li class="file-stats">
<a href="#4f2a9362f447013f7f313723ad6a9db0273d41c8">
<span class="new-file">
+
include/tsl/array_growth_policy.h
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</ul>
<h5>The diff was not included because it is too large.</h5>
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