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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/t-coffee">Debian Med / t-coffee</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/t-coffee/commit/87d5e99e3857505b5b84b7659dad5cf3578ade18">87d5e99e</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2019-08-02T13:58:10Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 13.30.0.6a5203f</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/t-coffee/commit/9b4b55b02fc7f643182854a76cc804f29c821c86">9b4b55b0</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2019-08-02T13:58:34Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/13.30.0.6a5203f'
Update to upstream version '13.30.0.6a5203f'
with Debian dir e023211be891eff546eb510dcf906bc98504c775</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/t-coffee/commit/6048954f3378350f6313d10a2eeb5a78a08824e6">6048954f</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2019-08-02T13:58:34Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/t-coffee/commit/1d894d8c7b54a9ea4e1943041db3f103274a7834">1d894d8c</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2019-08-02T13:58:34Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">debhelper-compat 12
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/t-coffee/commit/73fba9bc4706f2e97ddd8be59d31a3fc67f9fc9a">73fba9bc</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2019-08-02T13:58:39Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Standards-Version: 4.4.0
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/t-coffee/commit/ba720c2d85e6247c3bdaeef37bac00445588bc7d">ba720c2d</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2019-08-02T14:18:07Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update patches
</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#8382aae488daa740db1c3de5cf5400b1379fc6b6">
<span class="new-file">
+
bin/linux/t_coffee
</span>
</a>
</li>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#78fd675df1cf8c2d4c62ae1a9a912d15c8c50ba4">
<span class="deleted-file">
−
debian/compat
</span>
</a>
</li>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
</a>
</li>
<li class="file-stats">
<a href="#b21abc9e9819918419bfe0b0777b0b499f07e375">
debian/patches/clustalw2.patch
</a>
</li>
<li class="file-stats">
<a href="#8b7aede91f63a56963c57c21edec1407bbb19ab9">
debian/patches/fix_tempfile_name_sharing.patch
</a>
</li>
<li class="file-stats">
<a href="#7689488b0611809fd3cf1973798c485006db95fe">
debian/patches/mayhem.patch
</a>
</li>
<li class="file-stats">
<a href="#fb2826f928fcb9e1779ebe9572d63592eaff6fde">
debian/patches/ncbi-blast++_has_dropped_pl_extension.patch
</a>
</li>
<li class="file-stats">
<a href="#136495274f26b959acad83e1663732c8e8586e5d">
debian/patches/set_proper_dir_permissions.patch
</a>
</li>
<li class="file-stats">
<a href="#89fb511ffe93ee7826661ca1e3bb468dc1ad0ff2">
install
</a>
</li>
<li class="file-stats">
<a href="#930ff9e732755d92ad4ffb21bc49b7e5e3e6ad46">
license.txt
</a>
</li>
<li class="file-stats">
<a href="#cf4deb40cf1bab7a340f8ed7019aef2b739f2d46">
t_coffee_source/coffee_defines.h
</a>
</li>
<li class="file-stats">
<a href="#8ea58705de27edaf51994f03c14e41bdd8e3a5bf">
t_coffee_source/data_headers/perl_header_lib.h
</a>
</li>
<li class="file-stats">
<a href="#d67b595c98b0fe5dbf5a0ff7c52afd23fb0dd9cb">
t_coffee_source/data_headers/programmes_define.h
</a>
</li>
<li class="file-stats">
<a href="#92d5a98e1416295b971e88f979b3f05059cfe2d5">
t_coffee_source/define_header.h
</a>
</li>
<li class="file-stats">
<a href="#94c27a37d0c134d930f932727cd89cf7b9a98df5">
t_coffee_source/dev1_lib_header.h
</a>
</li>
<li class="file-stats">
<a href="#b3da7246919d356a36855b0f4512fc34b32e5de5">
t_coffee_source/dev_lib/dev1.c
</a>
</li>
<li class="file-stats">
<a href="#2eff344fc8b6a8715e7197e6a7d2a718072bb76d">
t_coffee_source/dev_lib/dev1.h
</a>
</li>
<li class="file-stats">
<a href="#bc6a28e577951a33418ae143e5d4e05bcb18e373">
t_coffee_source/dp_lib/CUSTOM_evaluate_for_struc.c
</a>
</li>
<li class="file-stats">
<a href="#05d199285210b82ee2feae38412e68936bffeafb">
t_coffee_source/dp_lib/CUSTOM_evaluate_for_struc.h
</a>
</li>
<li class="file-stats">
<a href="#1bbcce28838af02416ec39960e3a43ad923e823f">
t_coffee_source/dp_lib/evaluate.c
</a>
</li>
<li class="file-stats">
<a href="#eb09b80c82f7e297735ff0b51193d198d4ba4851">
t_coffee_source/dp_lib/evaluate.h
</a>
</li>
<li class="file-stats">
<a href="#6bd5d4298471f22bff3af097c1589db19ecfd8b8">
t_coffee_source/dp_lib/evaluate_dirichlet.c
</a>
</li>
<li class="file-stats">
<a href="#6814752e51ac642a71a4acc8d61f0e3c27350c45">
t_coffee_source/dp_lib/evaluate_dirichlet.h
</a>
</li>
<li class="file-stats">
<a href="#0dcb1978fbc6994b7686f07b3d7618602db4ede0">
t_coffee_source/dp_lib/evaluate_for_domain.c
</a>
</li>
<li class="file-stats">
<a href="#e6879cbe426fb3d62f482efd85a6ed568506743e">
t_coffee_source/dp_lib/evaluate_for_domain.h
</a>
</li>
<li class="file-stats">
<a href="#466243bb66ea51259d86e2eb7a1b7558f4710a61">
t_coffee_source/dp_lib/evaluate_for_struc.c
</a>
</li>
<li class="file-stats">
<a href="#82b7b2fb057a88fa4ec586d960fcd5e89abe237f">
t_coffee_source/dp_lib/evaluate_for_struc.h
</a>
</li>
<li class="file-stats">
<a href="#993341246460c499b25e8e108c981e60814c276a">
t_coffee_source/dp_lib/fasta_dp.h
</a>
</li>
<li class="file-stats">
<a href="#bd980cb47fd2275f2892573e233d23df5f1d3786">
t_coffee_source/dp_lib/fsa_dp.c
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
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