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<h3>
Andreas Tille pushed to branch upstream
at <a href="https://salsa.debian.org/med-team/pbbam">Debian Med / pbbam</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/pbbam/commit/f735b66e794437055468d7ab34e36f9f09f7860e">f735b66e</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2019-08-04T07:15:29Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 0.23.0+dfsg</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/pbbam/commit/7de6f9cdd4625a23c5715f6db24878e4c266cd09">7de6f9cd</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2019-08-04T13:37:15Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 0.23.0+dfsg</pre>
</li>
</ul>
<h4>30 changed files:</h4>
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<li class="file-stats">
<a href="#a5cc2925ca8258af241be7e5b0381edf30266302">
.gitignore
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<li class="file-stats">
<a href="#ab09011fa121d0a2bb9fa4ca76094f2482b902b7">
CHANGELOG.md
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</li>
<li class="file-stats">
<a href="#9a2aa4db38d3115ed60da621e012c0efc0172aae">
<span class="deleted-file">
−
CMakeLists.txt
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</li>
<li class="file-stats">
<a href="#8ab4e94f59343a8b2d003b0b47d21fff1724bfd9">
bamboo_build.sh
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<li class="file-stats">
<a href="#9398bc3e87c3099e8a7ae7d89484b974befd5632">
<span class="deleted-file">
−
bamboo_build_itg.sh
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</a>
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<li class="file-stats">
<a href="#dfc87e80cd4980cbb16396e3467d4c53255a4117">
<span class="deleted-file">
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bamboo_build_pa.sh
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<li class="file-stats">
<a href="#4a9054a2e76c5e93690e3037df69a85ce2d0b0c9">
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bamboo_coverage.sh
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<li class="file-stats">
<a href="#7634cec584cb3ab80ad8821c12dcc759aa942d3d">
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cmake/FindHTSlib.cmake
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<li class="file-stats">
<a href="#4e7126818e54ed308c4f1f967280d666c0aeb36c">
<span class="deleted-file">
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cmake/PbbamTool.cmake
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<li class="file-stats">
<a href="#74d27f873410fce0345b471aeef813dd51a3a1f7">
<span class="deleted-file">
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cmake/pbbam-ccache.cmake
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<li class="file-stats">
<a href="#c0ba31cce652e9610d98f43a92d43c475fd5fddb">
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cmake/pbbam-compilerflags.cmake
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<li class="file-stats">
<a href="#255d68e99c391aa9ae8631673eadeef9a98ef65d">
<span class="deleted-file">
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cmake/pbbam-dependencies.cmake
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<li class="file-stats">
<a href="#861766dddd97dbf9f6389c1cfd883fa9445b8a42">
<span class="deleted-file">
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cmake/pbbam-libtype.cmake
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<li class="file-stats">
<a href="#f8b8c04fcf7e182d3a4d9ab548e1053c614a2924">
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docs/CMakeLists.txt
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<li class="file-stats">
<a href="#aded7756cdea7c289134466a0d54da4f26d43abb">
docs/source/conf.py
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<li class="file-stats">
<a href="#498eb05a8a249beb467f2881b023350603fbd58f">
docs/source/getting_started.rst
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<a href="#ecf7c013c754ea293858e911701c960b42edb676">
<span class="deleted-file">
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docs/source/swig_bindings.rst
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<li class="file-stats">
<a href="#5bdbcb24ddd481424cc214b578f600846d7d35b4">
docs/specs/pbbam.rst
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<li class="file-stats">
<a href="#feedf4d0444f717d7227468a9529c2cf9740b6fd">
include/meson.build
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<li class="file-stats">
<a href="#0b230145bb13dc51db1e0e68ac2723313ee229a9">
include/pbbam/Accuracy.h
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<li class="file-stats">
<a href="#97b03698cb36b558ef2b83306185f1493f428d44">
include/pbbam/AlignmentPrinter.h
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</li>
<li class="file-stats">
<a href="#9b8e7465fdabd2180a1985fc676ea4cf29c95d7d">
include/pbbam/BaiIndexedBamReader.h
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<li class="file-stats">
<a href="#e11de4080cabe1fe6fbdeab22b0f064fdbeab822">
include/pbbam/BamFile.h
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<li class="file-stats">
<a href="#accf87f74fdd46233f3ca7733c793ca67088e74b">
tools/common/BamFileMerger.h
→
include/pbbam/BamFileMerger.h
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<li class="file-stats">
<a href="#460961253fa25e9fb04edd9d56917c4a055683d4">
include/pbbam/BamHeader.h
</a>
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<li class="file-stats">
<a href="#3a425e9a92a7ed061a49ea98c687bb30cd748500">
include/pbbam/BamReader.h
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<li class="file-stats">
<a href="#97939080c14fd57f90725f590b1094f8f0ee9f10">
include/pbbam/BamRecord.h
</a>
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<li class="file-stats">
<a href="#967b12503062b54b346b15d4c2d01c6fdbcfbdef">
include/pbbam/BamRecordBuilder.h
</a>
</li>
<li class="file-stats">
<a href="#6f0af9cd5ecfc522cf50a17f98ffea7c95f16624">
include/pbbam/BamRecordImpl.h
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<li class="file-stats">
<a href="#b96a662b54ae36b7eea4f8ddbc5f90133ff94dff">
include/pbbam/BamRecordView.h
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<h5>The diff was not included because it is too large.</h5>
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