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<h3>
Shayan Doust pushed to branch master
at <a href="https://salsa.debian.org/med-team/fast">Debian Med / fast</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/fast/commit/b8f58964ea77f3e6bf3b9927b81c3f08d48c5ad3">b8f58964</a></strong>
<div>
<span>by Shayan Doust</span>
<i>at 2019-08-08T19:17:58Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Use system openigtlink library
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/fast/commit/8cc83f9935d1c947a292bb10c4a55d631cdc0237">8cc83f99</a></strong>
<div>
<span>by Shayan Doust</span>
<i>at 2019-08-08T19:25:23Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Add a description to this new patch and add missing dependency to debian/control
</pre>
</li>
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<h4>5 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
</a>
</li>
<li class="file-stats">
<a href="#00f4cf567084cb6654fface8185934c5cfbd2973">
<span class="new-file">
+
debian/patches/fix_source_openigtlink.patch
</span>
</a>
</li>
<li class="file-stats">
<a href="#b1f20e08e8ebfc5e79cd12ddc5bb08dd0ac82600">
debian/patches/prevent_cmake_downloading.patch
</a>
</li>
<li class="file-stats">
<a href="#bc34014ab4b9a49dd7a27bdd8d352912607c3a96">
debian/patches/series
</a>
</li>
<li class="file-stats">
<a href="#831429e84a26d10149931553ea77c7237b78611b">
debian/patches/use_system_libs.patch
</a>
</li>
</ul>
<h4>Changes:</h4>
<li id="58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
<a href="https://salsa.debian.org/med-team/fast/compare/645750571a7072770ecd29353f5e76512b4ded2b...8cc83f9935d1c947a292bb10c4a55d631cdc0237#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2"><strong>debian/control</strong></a>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="14" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -14,6 +14,7 @@ Build-Depends: debhelper-compat (= 12),</td>
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14
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<td class="diff-line-num new_line" data-linenumber="14" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="plaintext"> opencl-c-headers,</span>
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<td class="diff-line-num old_line" data-linenumber="15" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="diff-line-num new_line" data-linenumber="15" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC15" class="line" lang="plaintext"> ocl-icd-opencl-dev,</span>
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<td class="diff-line-num old_line" data-linenumber="16" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="diff-line-num new_line" data-linenumber="16" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC16" class="line" lang="plaintext"> libopenslide-dev,</span>
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<td class="diff-line-num new new_line" data-linenumber="17" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="plaintext"> libopenigtlink-dev,</span>
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<td class="diff-line-num new_line" data-linenumber="18" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="plaintext"> git</span>
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<td class="diff-line-num old_line" data-linenumber="18" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="diff-line-num new_line" data-linenumber="19" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC19" class="line" lang="plaintext">Standards-Version: 4.3.0</span>
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<td class="diff-line-num old_line" data-linenumber="19" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
19
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<td class="diff-line-num new_line" data-linenumber="20" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC20" class="line" lang="plaintext">Vcs-Browser: https://salsa.debian.org/med-team/fast</span>
</pre>
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<br>
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<li id="00f4cf567084cb6654fface8185934c5cfbd2973">
<a href="https://salsa.debian.org/med-team/fast/compare/645750571a7072770ecd29353f5e76512b4ded2b...8cc83f9935d1c947a292bb10c4a55d631cdc0237#00f4cf567084cb6654fface8185934c5cfbd2973"><strong>debian/patches/fix_source_openigtlink.patch</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="diff"><span class="p">Description: modify source files to use correct include directory</span></span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="diff"> For some reason, the source files use igtl as the directory for the openigtlink library, however for the packaged alternative of openigtlink, openigtlink directory must be used instead.</span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="diff"><span class="p">Author: Shayan Doust <hello@shayandoust.me></span></span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="diff"><span class="p">Last-Update: 2019-08-08</span></span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="diff"><span class="p">---</span></span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="diff"></span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="diff">Index: fast/source/FAST/Streamers/OpenIGTLinkStreamer.cpp</span>
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<td class="diff-line-num new new_line" data-linenumber="8" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="diff"><span class="gh" style="color: #999;">===================================================================</span></span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- fast.orig/source/FAST/Streamers/OpenIGTLinkStreamer.cpp 2019-08-08 20:20:52.599054344 +0100</span></span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ fast/source/FAST/Streamers/OpenIGTLinkStreamer.cpp 2019-08-08 20:20:52.591054278 +0100</span></span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="diff"><span class="p">@@ -1,14 +1,14 @@</span></span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="diff"> #include "OpenIGTLinkStreamer.hpp"</span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="diff"> #include "FAST/Data/Image.hpp"</span>
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14
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="diff"> #include "FAST/AffineTransformation.hpp"</span>
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15
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-#include <igtl/igtlOSUtil.h></span></span>
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16
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-#include <igtl/igtlMessageHeader.h></span></span>
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17
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-#include <igtl/igtlTransformMessage.h></span></span>
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18
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-#include <igtl/igtlPositionMessage.h></span></span>
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19
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-#include <igtl/igtlImageMessage.h></span></span>
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20
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-#include <igtl/igtlStatusMessage.h></span></span>
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21
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<pre style="margin: 0;">+<span id="LC21" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-#include <igtl/igtlStringMessage.h></span></span>
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22
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<pre style="margin: 0;">+<span id="LC22" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-#include <igtl/igtlClientSocket.h></span></span>
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23
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<pre style="margin: 0;">+<span id="LC23" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#include <openigtlink/igtlOSUtil.h></span></span>
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24
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<pre style="margin: 0;">+<span id="LC24" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#include <openigtlink/igtlMessageHeader.h></span></span>
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25
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<pre style="margin: 0;">+<span id="LC25" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#include <openigtlink/igtlTransformMessage.h></span></span>
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26
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<pre style="margin: 0;">+<span id="LC26" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#include <openigtlink/igtlPositionMessage.h></span></span>
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<td class="diff-line-num new new_line" data-linenumber="27" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
27
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<pre style="margin: 0;">+<span id="LC27" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#include <openigtlink/igtlImageMessage.h></span></span>
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<td class="diff-line-num new new_line" data-linenumber="28" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
28
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<pre style="margin: 0;">+<span id="LC28" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#include <openigtlink/igtlStatusMessage.h></span></span>
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<td class="diff-line-num new new_line" data-linenumber="29" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
29
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<pre style="margin: 0;">+<span id="LC29" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#include <openigtlink/igtlStringMessage.h></span></span>
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30
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<pre style="margin: 0;">+<span id="LC30" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#include <openigtlink/igtlClientSocket.h></span></span>
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31
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<pre style="margin: 0;">+<span id="LC31" class="line" lang="diff"> #include <chrono></span>
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32
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<pre style="margin: 0;">+<span id="LC32" class="line" lang="diff"> </span>
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33
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<pre style="margin: 0;">+<span id="LC33" class="line" lang="diff"> namespace fast {</span>
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34
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<pre style="margin: 0;">+<span id="LC34" class="line" lang="diff"><span class="gh" style="color: #999;">Index: fast/source/FAST/Streamers/Tests/DummyIGTLServer.cpp</span></span>
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35
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<pre style="margin: 0;">+<span id="LC35" class="line" lang="diff"><span class="gh" style="color: #999;">===================================================================</span></span>
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36
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<pre style="margin: 0;">+<span id="LC36" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- fast.orig/source/FAST/Streamers/Tests/DummyIGTLServer.cpp 2019-08-08 20:20:52.599054344 +0100</span></span>
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37
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<pre style="margin: 0;">+<span id="LC37" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ fast/source/FAST/Streamers/Tests/DummyIGTLServer.cpp 2019-08-08 20:20:52.595054312 +0100</span></span>
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<pre style="margin: 0;">+<span id="LC38" class="line" lang="diff"><span class="p">@@ -1,9 +1,9 @@</span></span>
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<pre style="margin: 0;">+<span id="LC39" class="line" lang="diff"> #include "DummyIGTLServer.hpp"</span>
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<pre style="margin: 0;">+<span id="LC40" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC41" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-#include <igtl/igtlServerSocket.h></span></span>
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42
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<pre style="margin: 0;">+<span id="LC42" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-#include <igtl/igtlImageMessage.h></span></span>
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43
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<pre style="margin: 0;">+<span id="LC43" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-#include <igtl/igtlTransformMessage.h></span></span>
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44
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<pre style="margin: 0;">+<span id="LC44" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-#include <igtl/igtlOSUtil.h></span></span>
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45
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<pre style="margin: 0;">+<span id="LC45" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#include <openigtlink/igtlServerSocket.h></span></span>
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46
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<pre style="margin: 0;">+<span id="LC46" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#include <openigtlink/igtlImageMessage.h></span></span>
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47
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<pre style="margin: 0;">+<span id="LC47" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#include <openigtlink/igtlTransformMessage.h></span></span>
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48
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<pre style="margin: 0;">+<span id="LC48" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#include <openigtlink/igtlOSUtil.h></span></span>
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<pre style="margin: 0;">+<span id="LC49" class="line" lang="diff"> #include "FAST/Tests/DummyObjects.hpp"</span>
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<pre style="margin: 0;">+<span id="LC50" class="line" lang="diff"> #include "FAST/Data/Image.hpp"</span>
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<pre style="margin: 0;">+<span id="LC51" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC52" class="line" lang="diff"><span class="gh" style="color: #999;">Index: fast/source/FAST/Tools/OpenIGTLinkServer/GUI.cpp</span></span>
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<pre style="margin: 0;">+<span id="LC53" class="line" lang="diff"><span class="gh" style="color: #999;">===================================================================</span></span>
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<pre style="margin: 0;">+<span id="LC54" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- fast.orig/source/FAST/Tools/OpenIGTLinkServer/GUI.cpp 2019-08-08 20:20:52.599054344 +0100</span></span>
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<pre style="margin: 0;">+<span id="LC55" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ fast/source/FAST/Tools/OpenIGTLinkServer/GUI.cpp 2019-08-08 20:20:52.595054312 +0100</span></span>
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<pre style="margin: 0;">+<span id="LC56" class="line" lang="diff"><span class="p">@@ -7,9 +7,9 @@</span></span>
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<pre style="margin: 0;">+<span id="LC57" class="line" lang="diff"> #include <QMessageBox></span>
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<pre style="margin: 0;">+<span id="LC58" class="line" lang="diff"> #include <QListWidget></span>
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<pre style="margin: 0;">+<span id="LC59" class="line" lang="diff"> #include <QFileDialog></span>
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<pre style="margin: 0;">+<span id="LC60" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-#include <igtl/igtlImageMessage.h></span></span>
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<pre style="margin: 0;">+<span id="LC61" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-#include <igtl/igtlTransformMessage.h></span></span>
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<pre style="margin: 0;">+<span id="LC62" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-#include <igtl/igtlOSUtil.h></span></span>
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63
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<pre style="margin: 0;">+<span id="LC63" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#include <openigtlink/igtlImageMessage.h></span></span>
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64
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<pre style="margin: 0;">+<span id="LC64" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#include <openigtlink/igtlTransformMessage.h></span></span>
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65
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<pre style="margin: 0;">+<span id="LC65" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#include <openigtlink/igtlOSUtil.h></span></span>
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<pre style="margin: 0;">+<span id="LC66" class="line" lang="diff"> #include <FAST/Streamers/ImageFileStreamer.hpp></span>
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67
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<pre style="margin: 0;">+<span id="LC67" class="line" lang="diff"> #include <FAST/Data/Image.hpp></span>
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<pre style="margin: 0;">+<span id="LC68" class="line" lang="diff"> #include <QMetaType></span>
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<pre style="margin: 0;">+<span id="LC69" class="line" lang="diff"><span class="p">@@ -287,4 +287,4 @@</span></span>
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<pre style="margin: 0;">+<span id="LC70" class="line" lang="diff"> mFPS = fps;</span>
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<pre style="margin: 0;">+<span id="LC71" class="line" lang="diff"> }</span>
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<pre style="margin: 0;">+<span id="LC72" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC73" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-}</span></span>
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<pre style="margin: 0;">+<span id="LC74" class="line" lang="diff"><span class="err" style="color: #a61717; background-color: #e3d2d2;">\</span> No newline at end of file</span>
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<pre style="margin: 0;">+<span id="LC75" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+}</span></span>
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<pre style="margin: 0;">+<span id="LC76" class="line" lang="diff"><span class="gh" style="color: #999;">Index: fast/source/FAST/Tools/OpenIGTLinkServer/GUI.hpp</span></span>
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<pre style="margin: 0;">+<span id="LC77" class="line" lang="diff"><span class="gh" style="color: #999;">===================================================================</span></span>
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<pre style="margin: 0;">+<span id="LC78" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- fast.orig/source/FAST/Tools/OpenIGTLinkServer/GUI.hpp 2019-08-08 20:20:52.599054344 +0100</span></span>
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<pre style="margin: 0;">+<span id="LC79" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ fast/source/FAST/Tools/OpenIGTLinkServer/GUI.hpp 2019-08-08 20:20:52.595054312 +0100</span></span>
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<pre style="margin: 0;">+<span id="LC80" class="line" lang="diff"><span class="p">@@ -2,7 +2,7 @@</span></span>
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<pre style="margin: 0;">+<span id="LC81" class="line" lang="diff"> #define FAST_OPENIGTLINKSERVER_GUI_HPP_</span>
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<pre style="margin: 0;">+<span id="LC82" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC83" class="line" lang="diff"> #include "FAST/Visualization/Window.hpp"</span>
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<pre style="margin: 0;">+<span id="LC84" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-#include <igtl/igtlServerSocket.h></span></span>
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<pre style="margin: 0;">+<span id="LC85" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#include <openigtlink/igtlServerSocket.h></span></span>
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<pre style="margin: 0;">+<span id="LC86" class="line" lang="diff"> #include <thread></span>
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<pre style="margin: 0;">+<span id="LC89" class="line" lang="diff"><span class="gh" style="color: #999;">Index: fast/source/FAST/Tools/OpenIGTLinkServer/main.cpp</span></span>
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<pre style="margin: 0;">+<span id="LC90" class="line" lang="diff"><span class="gh" style="color: #999;">===================================================================</span></span>
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<pre style="margin: 0;">+<span id="LC91" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- fast.orig/source/FAST/Tools/OpenIGTLinkServer/main.cpp 2019-08-08 20:20:52.599054344 +0100</span></span>
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<pre style="margin: 0;">+<span id="LC92" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ fast/source/FAST/Tools/OpenIGTLinkServer/main.cpp 2019-08-08 20:20:52.595054312 +0100</span></span>
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<pre style="margin: 0;">+<span id="LC93" class="line" lang="diff"><span class="p">@@ -23,4 +23,4 @@</span></span>
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<pre style="margin: 0;">+<span id="LC94" class="line" lang="diff"> Reporter::setGlobalReportMethod(Reporter::COUT);</span>
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<pre style="margin: 0;">+<span id="LC95" class="line" lang="diff"> window->getReporter().setReportMethod(Reporter::COUT);</span>
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<pre style="margin: 0;">+<span id="LC96" class="line" lang="diff"> window->start();</span>
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<pre style="margin: 0;">+<span id="LC97" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-}</span></span>
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98
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<pre style="margin: 0;">+<span id="LC98" class="line" lang="diff"><span class="err" style="color: #a61717; background-color: #e3d2d2;">\</span> No newline at end of file</span>
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<pre style="margin: 0;">+<span id="LC99" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+}</span></span></pre>
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<br>
</li>
<li id="b1f20e08e8ebfc5e79cd12ddc5bb08dd0ac82600">
<a href="https://salsa.debian.org/med-team/fast/compare/645750571a7072770ecd29353f5e76512b4ded2b...8cc83f9935d1c947a292bb10c4a55d631cdc0237#b1f20e08e8ebfc5e79cd12ddc5bb08dd0ac82600"><strong>debian/patches/prevent_cmake_downloading.patch</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -6,8 +6,8 @@ Last-Update: 2019-08-08</td>
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6
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="diff"></span>
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7
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7
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="diff">Index: fast/cmake/ExternalEigen.cmake</span>
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8
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8
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="diff"><span class="gh" style="color: #999;">===================================================================</span></span>
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9
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<pre style="margin: 0;">-<span id="LC9" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- fast.orig/cmake/ExternalEigen.cmake 2019-08-08 1<span class="idiff left right">6:04:41.4623740</span>17 +0100</span></span>
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<pre style="margin: 0;">-<span id="LC10" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ fast/cmake/ExternalEigen.cmake 2019-08-08 1<span class="idiff left right">6:04:41.458373984</span> +0100</span></span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- fast.orig/cmake/ExternalEigen.cmake 2019-08-08 1<span class="idiff left right">9:27:20.6925134</span>17 +0100</span></span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ fast/cmake/ExternalEigen.cmake 2019-08-08 1<span class="idiff left right">9:27:20.684513350</span> +0100</span></span>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="diff"><span class="p">@@ -1,21 +1,21 @@</span></span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="diff"> # Download and set up Eigen</span>
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="diff"> </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="50" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="50" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -50,8 +50,8 @@ Index: fast/cmake/ExternalEigen.cmake</td>
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<pre style="margin: 0;"> <span id="LC50" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#list(APPEND FAST_EXTERNAL_DEPENDENCIES eigen)</span></span>
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<pre style="margin: 0;"> <span id="LC51" class="line" lang="diff"><span class="gh" style="color: #999;">Index: fast/cmake/ExternalOpenSlide.cmake</span></span>
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<pre style="margin: 0;"> <span id="LC52" class="line" lang="diff"><span class="gh" style="color: #999;">===================================================================</span></span>
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<pre style="margin: 0;">-<span id="LC53" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- fast.orig/cmake/ExternalOpenSlide.cmake 2019-08-08 1<span class="idiff left right">6:04:41.4623740</span>17 +0100</span></span>
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<pre style="margin: 0;">-<span id="LC54" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ fast/cmake/ExternalOpenSlide.cmake 2019-08-08 1<span class="idiff left right">6:04:41.458373984</span> +0100</span></span>
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<pre style="margin: 0;">+<span id="LC53" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- fast.orig/cmake/ExternalOpenSlide.cmake 2019-08-08 1<span class="idiff left right">9:27:20.6925134</span>17 +0100</span></span>
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<pre style="margin: 0;">+<span id="LC54" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ fast/cmake/ExternalOpenSlide.cmake 2019-08-08 1<span class="idiff left right">9:27:20.684513350</span> +0100</span></span>
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<pre style="margin: 0;"> <span id="LC55" class="line" lang="diff"><span class="p">@@ -1,17 +1,17 @@</span></span>
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<pre style="margin: 0;"> <span id="LC56" class="line" lang="diff"> # Download and set up OpenSlide</span>
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<pre style="margin: 0;"> <span id="LC57" class="line" lang="diff"> </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -85,8 +85,8 @@ Index: fast/cmake/ExternalOpenSlide.cmake</td>
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<pre style="margin: 0;"> <span id="LC85" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#endif()</span></span>
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<pre style="margin: 0;"> <span id="LC86" class="line" lang="diff"><span class="gh" style="color: #999;">Index: fast/cmake/ExternalZlib.cmake</span></span>
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<pre style="margin: 0;"> <span id="LC87" class="line" lang="diff"><span class="gh" style="color: #999;">===================================================================</span></span>
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<pre style="margin: 0;">-<span id="LC88" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- fast.orig/cmake/ExternalZlib.cmake 2019-08-08 1<span class="idiff left right">6:04:41.4623740</span>17 +0100</span></span>
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<pre style="margin: 0;">-<span id="LC89" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ fast/cmake/ExternalZlib.cmake 2019-08-08 1<span class="idiff left right">6:04:41.458373984</span> +0100</span></span>
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<pre style="margin: 0;">+<span id="LC88" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- fast.orig/cmake/ExternalZlib.cmake 2019-08-08 1<span class="idiff left right">9:27:20.6925134</span>17 +0100</span></span>
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<pre style="margin: 0;">+<span id="LC89" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ fast/cmake/ExternalZlib.cmake 2019-08-08 1<span class="idiff left right">9:27:20.688513383</span> +0100</span></span>
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<pre style="margin: 0;"> <span id="LC90" class="line" lang="diff"><span class="p">@@ -1,24 +1,24 @@</span></span>
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<pre style="margin: 0;"> <span id="LC91" class="line" lang="diff"> # Download and set up zlib</span>
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<pre style="margin: 0;"> <span id="LC92" class="line" lang="diff"> </span>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="134" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -134,3 +134,65 @@ Index: fast/cmake/ExternalZlib.cmake</td>
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<pre style="margin: 0;"> <span id="LC134" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#endif(WIN32)</span></span>
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<pre style="margin: 0;"> <span id="LC135" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#list(APPEND LIBRARIES ${ZLIB_LIBRARY})</span></span>
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<pre style="margin: 0;"> <span id="LC136" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#list(APPEND FAST_EXTERNAL_DEPENDENCIES zlib)</span></span>
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137
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<pre style="margin: 0;">+<span id="LC137" class="line" lang="diff"><span class="gh" style="color: #999;">Index: fast/cmake/ExternalOpenIGTLink.cmake</span></span>
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138
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<pre style="margin: 0;">+<span id="LC138" class="line" lang="diff"><span class="gh" style="color: #999;">===================================================================</span></span>
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139
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<pre style="margin: 0;">+<span id="LC139" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- fast.orig/cmake/ExternalOpenIGTLink.cmake 2019-08-08 19:21:36.965659511 +0100</span></span>
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140
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<pre style="margin: 0;">+<span id="LC140" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ fast/cmake/ExternalOpenIGTLink.cmake 2019-08-08 19:27:50.364759670 +0100</span></span>
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<td class="diff-line-num new new_line" data-linenumber="141" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
141
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<pre style="margin: 0;">+<span id="LC141" class="line" lang="diff"><span class="p">@@ -1,30 +1,30 @@</span></span>
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<td class="diff-line-num new new_line" data-linenumber="142" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
142
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<pre style="margin: 0;">+<span id="LC142" class="line" lang="diff"> # Download and set up zlib</span>
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143
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<pre style="margin: 0;">+<span id="LC143" class="line" lang="diff"> </span>
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<td class="diff-line-num new new_line" data-linenumber="144" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
144
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<pre style="margin: 0;">+<span id="LC144" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-include(cmake/Externals.cmake)</span></span>
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<td class="diff-line-num new new_line" data-linenumber="145" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
145
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<pre style="margin: 0;">+<span id="LC145" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#include(cmake/Externals.cmake)</span></span>
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146
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<pre style="margin: 0;">+<span id="LC146" class="line" lang="diff"> </span>
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<td class="diff-line-num new new_line" data-linenumber="147" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
147
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<pre style="margin: 0;">+<span id="LC147" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-ExternalProject_Add(OpenIGTLink</span></span>
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<td class="diff-line-num new new_line" data-linenumber="148" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
148
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<pre style="margin: 0;">+<span id="LC148" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- PREFIX ${FAST_EXTERNAL_BUILD_DIR}/OpenIGTLink</span></span>
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<td class="diff-line-num new new_line" data-linenumber="149" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
149
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<pre style="margin: 0;">+<span id="LC149" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- BINARY_DIR ${FAST_EXTERNAL_BUILD_DIR}/OpenIGTLink</span></span>
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150
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<pre style="margin: 0;">+<span id="LC150" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- GIT_REPOSITORY "https://github.com/openigtlink/OpenIGTLink.git"</span></span>
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151
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<pre style="margin: 0;">+<span id="LC151" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- GIT_TAG "v2.1"</span></span>
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152
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<pre style="margin: 0;">+<span id="LC152" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- CMAKE_ARGS</span></span>
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153
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<pre style="margin: 0;">+<span id="LC153" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- -DBUILD_SHARED_LIBS=ON</span></span>
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154
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<pre style="margin: 0;">+<span id="LC154" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- -DBUILD_TESTING=OFF</span></span>
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155
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<pre style="margin: 0;">+<span id="LC155" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- -DBUILD_EXAMPLES=OFF</span></span>
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156
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<pre style="margin: 0;">+<span id="LC156" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- -DLIBRARY_OUTPUT_PATH=${FAST_EXTERNAL_INSTALL_DIR}/lib/</span></span>
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<td class="diff-line-num new new_line" data-linenumber="157" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
157
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<pre style="margin: 0;">+<span id="LC157" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- -DCMAKE_MACOSX_RPATH=ON</span></span>
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<td class="diff-line-num new new_line" data-linenumber="158" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
158
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<pre style="margin: 0;">+<span id="LC158" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- -DOpenIGTLink_INSTALL_LIB_DIR=${FAST_EXTERNAL_INSTALL_DIR}/lib/</span></span>
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<td class="diff-line-num new new_line" data-linenumber="159" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
159
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<pre style="margin: 0;">+<span id="LC159" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- CMAKE_CACHE_ARGS</span></span>
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<td class="diff-line-num new new_line" data-linenumber="160" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
160
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<pre style="margin: 0;">+<span id="LC160" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- -DCMAKE_BUILD_TYPE:STRING=Release</span></span>
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<td class="diff-line-num new new_line" data-linenumber="161" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
161
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<pre style="margin: 0;">+<span id="LC161" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- -DCMAKE_VERBOSE_MAKEFILE:BOOL=OFF</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="137" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="162" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
162
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<pre style="margin: 0;">+<span id="LC162" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- -DCMAKE_INSTALL_MESSAGE:BOOL=LAZY</span></span>
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<td class="diff-line-num new new_line" data-linenumber="163" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
163
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<pre style="margin: 0;">+<span id="LC163" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- -DCMAKE_INSTALL_PREFIX:STRING=${FAST_EXTERNAL_INSTALL_DIR}</span></span>
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<td class="diff-line-num new new_line" data-linenumber="164" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
164
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<pre style="margin: 0;">+<span id="LC164" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-)</span></span>
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<td class="diff-line-num new new_line" data-linenumber="165" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
165
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<pre style="margin: 0;">+<span id="LC165" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#ExternalProject_Add(OpenIGTLink</span></span>
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<td class="diff-line-num new new_line" data-linenumber="166" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
166
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<pre style="margin: 0;">+<span id="LC166" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+# PREFIX ${FAST_EXTERNAL_BUILD_DIR}/OpenIGTLink</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="137" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="167" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
167
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<pre style="margin: 0;">+<span id="LC167" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+# BINARY_DIR ${FAST_EXTERNAL_BUILD_DIR}/OpenIGTLink</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="137" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="168" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
168
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<pre style="margin: 0;">+<span id="LC168" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+# GIT_REPOSITORY "https://github.com/openigtlink/OpenIGTLink.git"</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="137" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="169" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
169
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<pre style="margin: 0;">+<span id="LC169" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+# GIT_TAG "v2.1"</span></span>
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<td class="diff-line-num new old_line" data-linenumber="137" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="170" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
170
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<pre style="margin: 0;">+<span id="LC170" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+# CMAKE_ARGS</span></span>
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</td>
<td class="diff-line-num new new_line" data-linenumber="171" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
171
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<pre style="margin: 0;">+<span id="LC171" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+# -DBUILD_SHARED_LIBS=ON</span></span>
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<td class="diff-line-num new old_line" data-linenumber="137" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="172" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
172
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<pre style="margin: 0;">+<span id="LC172" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+# -DBUILD_TESTING=OFF</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="137" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="173" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
173
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<pre style="margin: 0;">+<span id="LC173" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+# -DBUILD_EXAMPLES=OFF</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="137" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="174" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
174
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<pre style="margin: 0;">+<span id="LC174" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+# -DLIBRARY_OUTPUT_PATH=${FAST_EXTERNAL_INSTALL_DIR}/lib/</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="137" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="175" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
175
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<pre style="margin: 0;">+<span id="LC175" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+# -DCMAKE_MACOSX_RPATH=ON</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="137" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="176" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
176
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<pre style="margin: 0;">+<span id="LC176" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+# -DOpenIGTLink_INSTALL_LIB_DIR=${FAST_EXTERNAL_INSTALL_DIR}/lib/</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="137" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="177" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
177
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<pre style="margin: 0;">+<span id="LC177" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+# CMAKE_CACHE_ARGS</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="137" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="178" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
178
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<pre style="margin: 0;">+<span id="LC178" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+# -DCMAKE_BUILD_TYPE:STRING=Release</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="137" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="179" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
179
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC179" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+# -DCMAKE_VERBOSE_MAKEFILE:BOOL=OFF</span></span>
</pre>
</td>
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<td class="diff-line-num new old_line" data-linenumber="137" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="180" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
180
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC180" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+# -DCMAKE_INSTALL_MESSAGE:BOOL=LAZY</span></span>
</pre>
</td>
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<td class="diff-line-num new old_line" data-linenumber="137" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="181" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
181
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<td class="line_content new" style="padding-left: 0.5em; padding-right: 0.5em;" bgcolor="#ecfdf0">
<pre style="margin: 0;">+<span id="LC181" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+# -DCMAKE_INSTALL_PREFIX:STRING=${FAST_EXTERNAL_INSTALL_DIR}</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="137" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="182" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
182
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<pre style="margin: 0;">+<span id="LC182" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#)</span></span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="137" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="183" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
183
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<pre style="margin: 0;">+<span id="LC183" class="line" lang="diff"> </span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="137" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
</td>
<td class="diff-line-num new new_line" data-linenumber="184" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
184
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<pre style="margin: 0;">+<span id="LC184" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-if(WIN32)</span></span>
</pre>
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185
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<pre style="margin: 0;">+<span id="LC185" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-set(OpenIGTLink_LIBRARY OpenIGTLink.lib)</span></span>
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186
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<pre style="margin: 0;">+<span id="LC186" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-else()</span></span>
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187
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<pre style="margin: 0;">+<span id="LC187" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-set(OpenIGTLink_LIBRARY ${CMAKE_SHARED_LIBRARY_PREFIX}OpenIGTLink${CMAKE_SHARED_LIBRARY_SUFFIX})</span></span>
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188
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<pre style="margin: 0;">+<span id="LC188" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-endif()</span></span>
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189
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<pre style="margin: 0;">+<span id="LC189" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-list(APPEND LIBRARIES ${OpenIGTLink_LIBRARY})</span></span>
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190
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<pre style="margin: 0;">+<span id="LC190" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-list(APPEND FAST_EXTERNAL_DEPENDENCIES OpenIGTLink)</span></span>
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191
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<pre style="margin: 0;">+<span id="LC191" class="line" lang="diff"><span class="err" style="color: #a61717; background-color: #e3d2d2;">\</span> No newline at end of file</span>
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192
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<pre style="margin: 0;">+<span id="LC192" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#if(WIN32)</span></span>
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193
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<pre style="margin: 0;">+<span id="LC193" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#set(OpenIGTLink_LIBRARY OpenIGTLink.lib)</span></span>
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194
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<pre style="margin: 0;">+<span id="LC194" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#else()</span></span>
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195
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<pre style="margin: 0;">+<span id="LC195" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#set(OpenIGTLink_LIBRARY ${CMAKE_SHARED_LIBRARY_PREFIX}OpenIGTLink${CMAKE_SHARED_LIBRARY_SUFFIX})</span></span>
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196
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<pre style="margin: 0;">+<span id="LC196" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#endif()</span></span>
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197
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<pre style="margin: 0;">+<span id="LC197" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#list(APPEND LIBRARIES ${OpenIGTLink_LIBRARY})</span></span>
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198
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<pre style="margin: 0;">+<span id="LC198" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#list(APPEND FAST_EXTERNAL_DEPENDENCIES OpenIGTLink)</span></span></pre>
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<a href="https://salsa.debian.org/med-team/fast/compare/645750571a7072770ecd29353f5e76512b4ded2b...8cc83f9935d1c947a292bb10c4a55d631cdc0237#bc34014ab4b9a49dd7a27bdd8d352912607c3a96"><strong>debian/patches/series</strong></a>
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1
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">fix_source_openigtlink.patch</span>
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1
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2
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext">prevent_cmake_downloading.patch</span>
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2
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3
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext">remove_unneeded_installs.patch</span>
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3
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4
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext">use_system_libs.patch</span>
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<a href="https://salsa.debian.org/med-team/fast/compare/645750571a7072770ecd29353f5e76512b4ded2b...8cc83f9935d1c947a292bb10c4a55d631cdc0237#831429e84a26d10149931553ea77c7237b78611b"><strong>debian/patches/use_system_libs.patch</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -5,9 +5,9 @@ Author: Shayan Doust <hello@shayandoust.me></td>
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5
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5
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="diff"></span>
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6
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6
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="diff">Index: fast/CMakeLists.txt</span>
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7
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7
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="diff"><span class="gh" style="color: #999;">===================================================================</span></span>
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8
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<pre style="margin: 0;">-<span id="LC8" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- fast.orig/CMakeLists.txt 2019-08-08 1<span class="idiff left right">5:58:30.391366851</span> +0100</span></span>
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<pre style="margin: 0;">-<span id="LC9" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ fast/CMakeLists.txt 2019-08-08 1<span class="idiff left right">5:58:30.387366819</span> +0100</span></span>
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<pre style="margin: 0;">-<span id="LC10" class="line" lang="diff"><span class="p">@@ -170,6 +170,1<span class="idiff left right">2</span> @@</span></span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- fast.orig/CMakeLists.txt 2019-08-08 1<span class="idiff left right">9:28:18.008989077</span> +0100</span></span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ fast/CMakeLists.txt 2019-08-08 1<span class="idiff left right">9:28:40.589176448</span> +0100</span></span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="diff"><span class="p">@@ -170,6 +170,1<span class="idiff left right">3</span> @@</span></span>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="diff"> qt5_use_modules(FAST Widgets OpenGL) # Add Qt 5 modules</span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="diff"> endif()</span>
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="diff"> </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="16" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -16,6 +16,7 @@ Index: fast/CMakeLists.txt</td>
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<pre style="margin: 0;"> <span id="LC16" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+target_link_libraries(FAST PUBLIC Eigen3::Eigen)</span></span>
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<pre style="margin: 0;"> <span id="LC17" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+target_link_libraries(FAST PUBLIC openslide)</span></span>
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+target_link_libraries(FAST PUBLIC z)</span></span>
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+target_link_libraries(FAST PUBLIC OpenIGTLink)</span></span>
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<pre style="margin: 0;"> <span id="LC20" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+</span></span>
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<pre style="margin: 0;"> <span id="LC21" class="line" lang="diff"> ## Build test executable</span>
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<pre style="margin: 0;"> <span id="LC22" class="line" lang="diff"> if(FAST_BUILD_TESTS)</span>
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