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<h3>
Andreas Tille pushed to branch upstream
at <a href="https://salsa.debian.org/med-team/libncl">Debian Med / libncl</a>
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Commits:
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<strong><a href="https://salsa.debian.org/med-team/libncl/commit/474a5b03ac0c69e5103a4fa53debd7d9fa20ce8a">474a5b03</a></strong>
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<span>by Andreas Tille</span>
<i>at 2019-08-20T12:15:07Z</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 2.1.21+git20190531.feceb81</pre>
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<h4>2 changed files:</h4>
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<a href="#47c83ec1e0fe4761c46e9b9a2c5f6fe5abd0aea7">
example/splitsinfile/splitsstructs.cpp
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<li class="file-stats">
<a href="#70f27b453a0486a344ffe74462cf9e678e552a6c">
ncl/nxstaxablock.h
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<h4>Changes:</h4>
<li id="47c83ec1e0fe4761c46e9b9a2c5f6fe5abd0aea7">
<a href="https://salsa.debian.org/med-team/libncl/commit/474a5b03ac0c69e5103a4fa53debd7d9fa20ce8a#47c83ec1e0fe4761c46e9b9a2c5f6fe5abd0aea7"><strong>example/splitsinfile/splitsstructs.cpp</strong></a>
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="cpp"><span class="cp" style="color: #999; font-weight: 600;">#include "splitsstructs.h"</span></span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="cpp"><span class="cp" style="color: #999; font-weight: 600;">#include <algorithm></span></span>
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<td class="diff-line-num new_line" data-linenumber="3" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="cpp"><span class="kt" style="color: #458; font-weight: 600;">bool</span> <span class="n" style="color: #333;">TreesToSplits</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">gTrackTrivial</span> <span class="o" style="font-weight: 600;">=</span> <span class="nb" style="color: #0086b3;">false</span><span class="p">;</span></span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="cpp"><span class="kt" style="color: #458; font-weight: 600;">bool</span> <span class="n" style="color: #333;">TreesToSplits</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">gTreatAsRooted</span> <span class="o" style="font-weight: 600;">=</span> <span class="nb" style="color: #0086b3;">false</span><span class="p">;</span></span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="cpp"><span class="kt" style="color: #458; font-weight: 600;">bool</span> <span class="n" style="color: #333;">TreesToSplits</span><span class="o" style="font-weight: 600;">::</span><span class="n" style="color: #333;">gTrackFreq</span> <span class="o" style="font-weight: 600;">=</span> <span class="nb" style="color: #0086b3;">false</span><span class="p">;</span></span>
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<li id="70f27b453a0486a344ffe74462cf9e678e552a6c">
<a href="https://salsa.debian.org/med-team/libncl/commit/474a5b03ac0c69e5103a4fa53debd7d9fa20ce8a#70f27b453a0486a344ffe74462cf9e678e552a6c"><strong>ncl/nxstaxablock.h</strong></a>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="214" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="214" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -214,7 +214,7 @@ class NxsTaxaBlock</td>
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<td class="diff-line-num old_line" data-linenumber="214" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC214" class="line" lang="c"> <span class="n" style="color: #333;">taxLabels</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">other</span><span class="p">.</span><span class="n" style="color: #333;">taxLabels</span><span class="p">;</span></span>
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<pre style="margin: 0;"> <span id="LC215" class="line" lang="c"> <span class="n" style="color: #333;">labelToIndex</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">other</span><span class="p">.</span><span class="n" style="color: #333;">labelToIndex</span><span class="p">;</span></span>
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<pre style="margin: 0;"> <span id="LC216" class="line" lang="c"> <span class="n" style="color: #333;">dimNTax</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">other</span><span class="p">.</span><span class="n" style="color: #333;">dimNTax</span><span class="p">;</span></span>
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<pre style="margin: 0;">-<span id="LC217" class="line" lang="c"> <span class="n" style="color: #333;">taxSets</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">taxSets</span><span class="p">;</span></span>
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<pre style="margin: 0;">+<span id="LC217" class="line" lang="c"> <span class="n" style="color: #333;">taxSets</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;"><span class="idiff left">other</span></span><span class="p"><span class="idiff right">.</span></span><span class="n" style="color: #333;">taxSets</span><span class="p">;</span></span>
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<pre style="margin: 0;"> <span id="LC218" class="line" lang="c"> <span class="n" style="color: #333;">taxPartitions</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">other</span><span class="p">.</span><span class="n" style="color: #333;">taxPartitions</span><span class="p">;</span></span>
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<pre style="margin: 0;"> <span id="LC219" class="line" lang="c"> <span class="n" style="color: #333;">inactiveTaxa</span> <span class="o" style="font-weight: 600;">=</span> <span class="n" style="color: #333;">other</span><span class="p">.</span><span class="n" style="color: #333;">inactiveTaxa</span><span class="p">;</span></span>
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<pre style="margin: 0;"> <span id="LC220" class="line" lang="c"> <span class="p">}</span></span>
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