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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/phyml">Debian Med / phyml</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/phyml/commit/1c3ec46816524f06087f0de6ff6fa7367bd5c205">1c3ec468</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2019-08-24T14:08:32Z</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Close bug
</pre>
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<strong><a href="https://salsa.debian.org/med-team/phyml/commit/85df750220e2ac3eb5592a7719248242d1d0a6b5">85df7502</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2019-08-24T14:15:44Z</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Upload to unstable
</pre>
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<h4>2 changed files:</h4>
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<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
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<li class="file-stats">
<a href="#8c77cc51b09ef1f7b294222180bcdb53ebb70e2f">
debian/tests/run-unit-test
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<h4>Changes:</h4>
<li id="9c96da0e9f91d7d8937b69b524702c106258f0d1">
<a href="https://salsa.debian.org/med-team/phyml/compare/bd5434fa7fdf6da44db85b1a7bcfa4ac900d18d3...85df750220e2ac3eb5592a7719248242d1d0a6b5#9c96da0e9f91d7d8937b69b524702c106258f0d1"><strong>debian/changelog</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">phyml (3:3.3.20190321-2) <span class="idiff left right">UNRELEASED</span>; urgency=medium</span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">phyml (3:3.3.20190321-2) <span class="idiff left right">unstable</span>; urgency=medium</span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext"> * Fix autopkgtest</span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext"> Closes: #935598</span>
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext"> * Secure URI in copyright format</span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext"> * Remove trailing whitespace in debian/changelog</span>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext"> * Remove obsolete fields Name, Contact from debian/upstream/metadata.</span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC8" class="line" lang="plaintext"> -- Andreas Tille <tille@debian.org> Sat, 24 Aug 2019 1<span class="idiff left right">5:48:00</span> +0200</span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext"> -- Andreas Tille <tille@debian.org> Sat, 24 Aug 2019 1<span class="idiff left right">6:08:44</span> +0200</span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="plaintext">phyml (3:3.3.20190321-1) unstable; urgency=medium</span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="plaintext"></span>
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<li id="8c77cc51b09ef1f7b294222180bcdb53ebb70e2f">
<a href="https://salsa.debian.org/med-team/phyml/compare/bd5434fa7fdf6da44db85b1a7bcfa4ac900d18d3...85df750220e2ac3eb5592a7719248242d1d0a6b5#8c77cc51b09ef1f7b294222180bcdb53ebb70e2f"><strong>debian/tests/run-unit-test</strong></a>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="20" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="20" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -20,6 +20,7 @@ gunzip -r *</td>
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<pre style="margin: 0;"> <span id="LC20" class="line" lang="shell"><span class="nb" style="color: #0086b3;">export </span><span class="nv" style="color: #008080;">OMPI_MCA_plm_rsh_agent</span><span class="o" style="font-weight: 600;">=</span>/bin/false</span>
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<pre style="margin: 0;"> <span id="LC21" class="line" lang="shell"><span class="nb" style="color: #0086b3;">export </span><span class="nv" style="color: #008080;">OMPI_MCA_rmaps_base_oversubscribe</span><span class="o" style="font-weight: 600;">=</span>1</span>
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<pre style="margin: 0;"> <span id="LC22" class="line" lang="shell"></span>
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<pre style="margin: 0;">+<span id="LC23" class="line" lang="shell"><span class="nb" style="color: #0086b3;">set</span> <span class="nt" style="color: #000080;">-x</span></span>
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<pre style="margin: 0;"> <span id="LC24" class="line" lang="shell"><span class="nb" style="color: #0086b3;">export </span><span class="nv" style="color: #008080;">PHYMLCPUS</span><span class="o" style="font-weight: 600;">=</span>1</span>
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<pre style="margin: 0;"> <span id="LC25" class="line" lang="shell"><span class="nb" style="color: #0086b3;">echo</span> <span class="s2" style="color: #d14;">"DNA interleaved sequence file, default parameters single processor:"</span></span>
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<pre style="margin: 0;"> <span id="LC26" class="line" lang="shell">/usr/bin/phyml <span class="nt" style="color: #000080;">-i</span> nucleic</span>
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