<!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.0 Transitional//EN" "http://www.w3.org/TR/REC-html40/loose.dtd">
<html lang="en">
<head>
<meta content="text/html; charset=US-ASCII" http-equiv="Content-Type">
<title>
GitLab
</title>
<style>img {
max-width: 100%; height: auto;
}
</style>
</head>
<body>
<div class="content">
<h3>
Andreas Tille pushed to branch upstream
at <a href="https://salsa.debian.org/med-team/subread">Debian Med / subread</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/subread/commit/08dda10248877dc0076a4e9ce23b3033a42b1001">08dda102</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2019-09-05T07:09:38Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 2.0.0+dfsg</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#fda3484edf8db0684440157ce0b110d784d42704">
README.txt
</a>
</li>
<li class="file-stats">
<a href="#9b9715372d0cd39d21711a077b6f2ae42fb45135">
doc/SubreadUsersGuide.tex
</a>
</li>
<li class="file-stats">
<a href="#7079f81404dcaadc0154c53a419b2d1cb5f253e6">
src/HelperFunctions.c
</a>
</li>
<li class="file-stats">
<a href="#09a8e11089bd7b184c2ba7778565c1350e1c7e3a">
src/Makefile
</a>
</li>
<li class="file-stats">
<a href="#0f0909639769aa3e7d493b832c416371ba8f6089">
src/Makefile.MacOS
</a>
</li>
<li class="file-stats">
<a href="#65df1541a6e8b70705a975e5de9893a17917e840">
<span class="new-file">
+
src/Makefile.Windows
</span>
</a>
</li>
<li class="file-stats">
<a href="#03b53aa7b28dab0125f2bb23f06f341cab6c608d">
src/SNPCalling.c
</a>
</li>
<li class="file-stats">
<a href="#de13a8a387b0f71a691e5d23cf74468d6ad7c0a0">
src/core-bigtable.c
</a>
</li>
<li class="file-stats">
<a href="#296b4814ae931def4e82a8f84e22f6c24f5b3b14">
src/core-indel.c
</a>
</li>
<li class="file-stats">
<a href="#ecc92c74c51f8b1692fd1bd13b9657e456522c0a">
src/core-interface-aligner.c
</a>
</li>
<li class="file-stats">
<a href="#431a9a7f741eae0019b2785bf4ae504ca6fe0271">
src/core-interface-subjunc.c
</a>
</li>
<li class="file-stats">
<a href="#d7c9610d0bb39f36045810aea42dfc930a2d041f">
src/core-junction.c
</a>
</li>
<li class="file-stats">
<a href="#a26ea438a2b6aee04f419d17c87da7e9b997e7ae">
src/core.c
</a>
</li>
<li class="file-stats">
<a href="#3ff152fe6bda3f5dfee9715abff394de66921551">
src/core.h
</a>
</li>
<li class="file-stats">
<a href="#08ec1eca3761439e06c59fe3179a2eb515dfacb1">
src/detection-calls.c
</a>
</li>
<li class="file-stats">
<a href="#0cd9a7b1d1859b9b5f8aa2a313c4ccab061915c5">
src/gen_rand_reads.c
</a>
</li>
<li class="file-stats">
<a href="#18d5c843fdde01c811087dacdcf7dbe1f38af4d3">
src/gene-algorithms.c
</a>
</li>
<li class="file-stats">
<a href="#40d901ab9acccc80547ea96bc7257d6bbd327710">
src/gene-algorithms.h
</a>
</li>
<li class="file-stats">
<a href="#6612baeecf620e30ab51b9fb8e8a2afe1d40812b">
src/hashtable.c
</a>
</li>
<li class="file-stats">
<a href="#30c07b024c4fcae2a43837631bde802ba5d8e371">
src/hashtable.h
</a>
</li>
<li class="file-stats">
<a href="#db883abc086707d455e41cc6745055f2475bcc7f">
src/index-builder.c
</a>
</li>
<li class="file-stats">
<a href="#8ef51f137a175e45ca9d53b6eaeb6f55a775893d">
src/input-blc.c
</a>
</li>
<li class="file-stats">
<a href="#1d3ea1dfb44bc278d2d0dc98242cbaff49bcccb9">
src/input-blc.h
</a>
</li>
<li class="file-stats">
<a href="#af240e90f84ee342e36f1a8ee0eb08f1a4b16a3d">
src/input-files.c
</a>
</li>
<li class="file-stats">
<a href="#6907133cceb8c785482dac4a3125dbff95a3d8e2">
src/input-files.h
</a>
</li>
<li class="file-stats">
<a href="#aef065a1ffdfa8df02231e365a371371330dd76a">
src/long-hashtable.c
</a>
</li>
<li class="file-stats">
<a href="#425bd1a4976c5c2d9304588f9677dde9f41fb5b7">
src/longread-one/LRMconfig.h
</a>
</li>
<li class="file-stats">
<a href="#e0a41fae3dcf6b8f6387090ee96ebdd7376261bd">
src/longread-one/LRMfile-io.c
</a>
</li>
<li class="file-stats">
<a href="#8cbf0bcfa7d064579a49a80d30535fc4a31bbdac">
src/longread-one/LRMfile-io.h
</a>
</li>
<li class="file-stats">
<a href="#34226e52a8114f6aba62e0c977a00b4a1d0c9321">
src/longread-one/LRMhashtable.c
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
<div class="footer" style="margin-top: 10px;">
<p style="font-size: small; color: #777;">
—
<br>
<a href="https://salsa.debian.org/med-team/subread/commit/08dda10248877dc0076a4e9ce23b3033a42b1001">View it on GitLab</a>.
<br>
You're receiving this email because of your account on salsa.debian.org.
If you'd like to receive fewer emails, you can
adjust your notification settings.
<script type="application/ld+json">{"@context":"http://schema.org","@type":"EmailMessage","action":{"@type":"ViewAction","name":"View Commit","url":"https://salsa.debian.org/med-team/subread/commit/08dda10248877dc0076a4e9ce23b3033a42b1001"}}</script>
</p>
</div>
</body>
</html>