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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/subread">Debian Med / subread</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/subread/commit/0126b38f8ac84223ec4644321ab83b342617419a">0126b38f</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2019-09-05T07:03:39Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Use 2to3 to port to Python3
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/subread/commit/278e795b7f4c37691c4ac16c87ae2380f8338dc7">278e795b</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2019-09-05T07:09:26Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/subread/commit/08dda10248877dc0076a4e9ce23b3033a42b1001">08dda102</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2019-09-05T07:09:38Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 2.0.0+dfsg</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/subread/commit/78cebbcda13770f7031e0fd388e7d19a61b109c2">78cebbcd</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2019-09-05T07:10:37Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/2.0.0+dfsg'
Update to upstream version '2.0.0+dfsg'
with Debian dir 637e733c5cde124ae7121bcac4909ba77a4fa466</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/subread/commit/88d956cd57c7ad10dece808cf1ab051f30525eb7">88d956cd</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2019-09-05T07:30:32Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Adapt patches
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/subread/commit/b59084e1c2552441b0ccbab38b04c616c5992b10">b59084e1</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2019-09-05T07:35:30Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Upload to unstable
</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#fda3484edf8db0684440157ce0b110d784d42704">
README.txt
</a>
</li>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
</a>
</li>
<li class="file-stats">
<a href="#555c85016bd79aa8bbb523506af81b69d9c69534">
<span class="new-file">
+
debian/patches/2to3.patch
</span>
</a>
</li>
<li class="file-stats">
<a href="#e5dd98c113be2752e1d0ece7dd39cb253d83216c">
debian/patches/arch_specific_flags.patch
</a>
</li>
<li class="file-stats">
<a href="#fb9e8d937d72f3a26397728040ed9ba05f3aea89">
debian/patches/fix_ftbfs_kfreebsd.patch
</a>
</li>
<li class="file-stats">
<a href="#bc34014ab4b9a49dd7a27bdd8d352912607c3a96">
debian/patches/series
</a>
</li>
<li class="file-stats">
<a href="#738bfe9eb140bee362e519ae990e19d7391f9b5f">
debian/patches/typo.patch
</a>
</li>
<li class="file-stats">
<a href="#9b9715372d0cd39d21711a077b6f2ae42fb45135">
doc/SubreadUsersGuide.tex
</a>
</li>
<li class="file-stats">
<a href="#7079f81404dcaadc0154c53a419b2d1cb5f253e6">
src/HelperFunctions.c
</a>
</li>
<li class="file-stats">
<a href="#09a8e11089bd7b184c2ba7778565c1350e1c7e3a">
src/Makefile
</a>
</li>
<li class="file-stats">
<a href="#0f0909639769aa3e7d493b832c416371ba8f6089">
src/Makefile.MacOS
</a>
</li>
<li class="file-stats">
<a href="#65df1541a6e8b70705a975e5de9893a17917e840">
<span class="new-file">
+
src/Makefile.Windows
</span>
</a>
</li>
<li class="file-stats">
<a href="#03b53aa7b28dab0125f2bb23f06f341cab6c608d">
src/SNPCalling.c
</a>
</li>
<li class="file-stats">
<a href="#de13a8a387b0f71a691e5d23cf74468d6ad7c0a0">
src/core-bigtable.c
</a>
</li>
<li class="file-stats">
<a href="#296b4814ae931def4e82a8f84e22f6c24f5b3b14">
src/core-indel.c
</a>
</li>
<li class="file-stats">
<a href="#ecc92c74c51f8b1692fd1bd13b9657e456522c0a">
src/core-interface-aligner.c
</a>
</li>
<li class="file-stats">
<a href="#431a9a7f741eae0019b2785bf4ae504ca6fe0271">
src/core-interface-subjunc.c
</a>
</li>
<li class="file-stats">
<a href="#d7c9610d0bb39f36045810aea42dfc930a2d041f">
src/core-junction.c
</a>
</li>
<li class="file-stats">
<a href="#a26ea438a2b6aee04f419d17c87da7e9b997e7ae">
src/core.c
</a>
</li>
<li class="file-stats">
<a href="#3ff152fe6bda3f5dfee9715abff394de66921551">
src/core.h
</a>
</li>
<li class="file-stats">
<a href="#08ec1eca3761439e06c59fe3179a2eb515dfacb1">
src/detection-calls.c
</a>
</li>
<li class="file-stats">
<a href="#0cd9a7b1d1859b9b5f8aa2a313c4ccab061915c5">
src/gen_rand_reads.c
</a>
</li>
<li class="file-stats">
<a href="#18d5c843fdde01c811087dacdcf7dbe1f38af4d3">
src/gene-algorithms.c
</a>
</li>
<li class="file-stats">
<a href="#40d901ab9acccc80547ea96bc7257d6bbd327710">
src/gene-algorithms.h
</a>
</li>
<li class="file-stats">
<a href="#6612baeecf620e30ab51b9fb8e8a2afe1d40812b">
src/hashtable.c
</a>
</li>
<li class="file-stats">
<a href="#30c07b024c4fcae2a43837631bde802ba5d8e371">
src/hashtable.h
</a>
</li>
<li class="file-stats">
<a href="#db883abc086707d455e41cc6745055f2475bcc7f">
src/index-builder.c
</a>
</li>
<li class="file-stats">
<a href="#8ef51f137a175e45ca9d53b6eaeb6f55a775893d">
src/input-blc.c
</a>
</li>
<li class="file-stats">
<a href="#1d3ea1dfb44bc278d2d0dc98242cbaff49bcccb9">
src/input-blc.h
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
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