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<h3>
Michael R. Crusoe pushed to branch upstream
at <a href="https://salsa.debian.org/med-team/snakemake">Debian Med / snakemake</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/snakemake/commit/2b5d5be36fbc3e0848628865416c8ddef3cdacdb">2b5d5be3</a></strong>
<div>
<span>by Michael R. Crusoe</span>
<i>at 2019-09-13T14:14:49Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 5.6.0</pre>
</li>
</ul>
<h4>30 changed files:</h4>
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<li class="file-stats">
<a href="#a93800f494e087804c016fbdb4607cad81b91d6b">
.circleci/common.sh
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<li class="file-stats">
<a href="#fd5da61396a8376845bee5cdf71aaf3c98a888ae">
.circleci/config.yml
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<li class="file-stats">
<a href="#a5cc2925ca8258af241be7e5b0381edf30266302">
.gitignore
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<li class="file-stats">
<a href="#45267e3a9556cafa9cb7b61dab7a3b6659e73aad">
CHANGELOG.rst
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<li class="file-stats">
<a href="#0c5e606b8190495bf7dabc7b15d0135b72486926">
docs/executable.rst
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<li class="file-stats">
<a href="#3c7246c0b371cfd3a475428be04706178ca01f0f">
docs/project_info/faq.rst
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<a href="#dfeb7b6e739ba66056c1799c63a5a39c7698b59f">
docs/snakefiles/rules.rst
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<li class="file-stats">
<a href="#7f695df9a93bb6d2f47c562fd1282181e830528b">
docs/tutorial/basics.rst
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<li class="file-stats">
<a href="#cf170f1aad8eab1ea8f50709422e4eae4ebaf604">
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docs/tutorial/short.rst
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<li class="file-stats">
<a href="#54c391de2500e0856c23737daf64f9d931569110">
environment.yml
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<li class="file-stats">
<a href="#c2acba86d5ef7b186a3f54c5fcbfeeb889e18738">
misc/vim/syntax/snakemake.vim
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<li class="file-stats">
<a href="#f260ed3781b67dee69207fce8cb0b9fcf0fff461">
snakemake-tutorial.html
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<li class="file-stats">
<a href="#d366205d7cd679ff6d4a61f70728e92537101763">
snakemake/__init__.py
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<li class="file-stats">
<a href="#5e16cbeea010f59dbef52f8950f4873c94f39c7e">
snakemake/_version.py
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<li class="file-stats">
<a href="#cc2e928f15e341aa118531053338930d0d215b9d">
snakemake/conda.py
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<li class="file-stats">
<a href="#9821437dfb3fff8383b6066a2a3c7aa3f6712a32">
snakemake/dag.py
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<li class="file-stats">
<a href="#1dba76c2cca537b789f8754f5ddbed5dc36c6dee">
snakemake/executors.py
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<li class="file-stats">
<a href="#e933119c7503fe1d48ce0b0d37492388705f5808">
snakemake/io.py
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<li class="file-stats">
<a href="#818384818c4671b8354b6eb98ee2bab61c015a74">
snakemake/jobs.py
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<li class="file-stats">
<a href="#3b8110569f3a954f35bef1e287ed362ec60e9224">
snakemake/remote/gfal.py
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<li class="file-stats">
<a href="#3065d4749c6410564a20007bd7748abfda7699f6">
snakemake/report/__init__.py
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<li class="file-stats">
<a href="#7b2e7c5590f914b1c99d6d779757cc4e2527cd59">
snakemake/report/report.html
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<li class="file-stats">
<a href="#55752111e76e9d786fdb84c4e7fd9f6de5c67a24">
snakemake/rules.py
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<li class="file-stats">
<a href="#f00d39cf87461717d695c7d7a12876173105fc19">
snakemake/singularity.py
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<li class="file-stats">
<a href="#cb9e107597e441fb1c0d61663359d9cf1dbfe04d">
snakemake/workflow.py
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<li class="file-stats">
<a href="#f351bd1f5cb5bea4900302342c1a6874c33c189b">
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+
tests/profile/Snakefile
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<li class="file-stats">
<a href="#e081a1733f41808b4fededf081d89bcddd8bbcf2">
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+
tests/test_default_resources/Snakefile
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<li class="file-stats">
<a href="#c9099cec042de5b39912aefe2836aa112ab0bf60">
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tests/test_default_resources/expected-results/test.out
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<li class="file-stats">
<a href="#6a47977677f9e3c3ac2b2e03826b3533c5024f79">
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+
tests/test_expand_flag/Snakefile
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<li class="file-stats">
<a href="#273bc15aad4e5707efc684997ab12b4693fe0a9e">
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tests/test_expand_flag/expected-results/.gitignore
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<h5>The diff was not included because it is too large.</h5>
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