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<h3>
Steffen Möller pushed to branch master
at <a href="https://salsa.debian.org/med-team/idba">Debian Med / idba</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/idba/commit/0a4786dc325711ceb4e64cbb1dcb4357da6f1a72">0a4786dc</a></strong>
<div>
<span>by Steffen Moeller</span>
<i>at 2019-10-05T11:34:56Z</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">d/u/metadata: yamllint
</pre>
</li>
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<h4>1 changed file:</h4>
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<li class="file-stats">
<a href="#f5606a935d95a2f20059a7ac1136f47b2edadbf6">
debian/upstream/metadata
</a>
</li>
</ul>
<h4>Changes:</h4>
<li id="f5606a935d95a2f20059a7ac1136f47b2edadbf6">
<a href="https://salsa.debian.org/med-team/idba/commit/0a4786dc325711ceb4e64cbb1dcb4357da6f1a72#f5606a935d95a2f20059a7ac1136f47b2edadbf6"><strong>debian/upstream/metadata</strong></a>
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="plaintext">Reference:</span>
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<pre style="margin: 0;">-<span id="LC2" class="line" lang="plaintext"> <span class="idiff left right"> </span>- Author: ></span>
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3
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<pre style="margin: 0;">-<span id="LC3" class="line" lang="plaintext"> <span class="idiff left right"> </span>Yu Peng and Henry C. M. Leung and S. M. Yiu and Francis Y. L. Chin</span>
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4
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<pre style="margin: 0;">-<span id="LC4" class="line" lang="plaintext"> <span class="idiff left right"> </span>Title: ></span>
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5
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="plaintext"> <span class="idiff left right"> </span>IDBA-UD: a de novo assembler for single-cell and metagenomic</span>
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6
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="plaintext"> <span class="idiff left right"> </span>sequencing data with highly uneven depth</span>
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7
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<pre style="margin: 0;">-<span id="LC7" class="line" lang="plaintext"> <span class="idiff left right"> </span>Journal: Bioinformatics</span>
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8
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<pre style="margin: 0;">-<span id="LC8" class="line" lang="plaintext"> <span class="idiff left right"> </span>Year: 2012</span>
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9
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<pre style="margin: 0;">-<span id="LC9" class="line" lang="plaintext"> <span class="idiff left right"> </span>Volume: 28</span>
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10
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<pre style="margin: 0;">-<span id="LC10" class="line" lang="plaintext"> <span class="idiff left right"> </span>Number: 11</span>
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11
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<pre style="margin: 0;">-<span id="LC11" class="line" lang="plaintext"> <span class="idiff left right"> </span>Pages: 1420-1428</span>
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12
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<pre style="margin: 0;">-<span id="LC12" class="line" lang="plaintext"> <span class="idiff left right"> </span>DOI: 10.1093/bioinformatics/bts174</span>
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13
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<pre style="margin: 0;">-<span id="LC13" class="line" lang="plaintext"> <span class="idiff left right"> </span>PMID: 22495754</span>
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14
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<pre style="margin: 0;">-<span id="LC14" class="line" lang="plaintext"> <span class="idiff left right"> </span>URL: http://bioinformatics.oxfordjournals.org/content/28/11/1420.full</span>
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<pre style="margin: 0;">-<span id="LC15" class="line" lang="plaintext"> <span class="idiff left right"> </span>eprint: "http://bioinformatics.oxfordjournals.org/content/\</span>
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<pre style="margin: 0;">-<span id="LC16" class="line" lang="plaintext"> <span class="idiff left right"> </span>28/11/1420.full.pdf+html"</span>
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<pre style="margin: 0;">-<span id="LC17" class="line" lang="plaintext"> <span class="idiff left right"> </span>- Author: ></span>
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<pre style="margin: 0;">-<span id="LC18" class="line" lang="plaintext"> <span class="idiff left right"> </span>Yu Peng and Henry C. M. Leung and Siu-Ming Yiu and Ming-Ju Lv and</span>
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19
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<pre style="margin: 0;">-<span id="LC19" class="line" lang="plaintext"> <span class="idiff left right"> </span>Xin-Guang Zhu and Francis Y. L. Chin</span>
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<pre style="margin: 0;">-<span id="LC20" class="line" lang="plaintext"> <span class="idiff left right"> </span>Title: ></span>
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<pre style="margin: 0;">-<span id="LC21" class="line" lang="plaintext"> <span class="idiff left right"> </span>IDBA-tran: a more robust de novo de Bruijn graph assembler for</span>
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22
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<pre style="margin: 0;">-<span id="LC22" class="line" lang="plaintext"> <span class="idiff left right"> </span>transcriptomes with uneven expression levels</span>
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23
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<pre style="margin: 0;">-<span id="LC23" class="line" lang="plaintext"> <span class="idiff left right"> </span>Journal: Bioinformatics</span>
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<pre style="margin: 0;">-<span id="LC24" class="line" lang="plaintext"> <span class="idiff left right"> </span>Year: 2013</span>
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25
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<pre style="margin: 0;">-<span id="LC25" class="line" lang="plaintext"> <span class="idiff left right"> </span>Month: Jul</span>
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26
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<pre style="margin: 0;">-<span id="LC26" class="line" lang="plaintext"> <span class="idiff left right"> </span>Day: 1</span>
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27
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<pre style="margin: 0;">-<span id="LC27" class="line" lang="plaintext"> <span class="idiff left right"> </span>Volume: 29</span>
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28
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<pre style="margin: 0;">-<span id="LC28" class="line" lang="plaintext"> <span class="idiff left right"> </span>Number: 13</span>
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29
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<pre style="margin: 0;">-<span id="LC29" class="line" lang="plaintext"> <span class="idiff left right"> </span>Pages: i326-i334</span>
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30
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<pre style="margin: 0;">-<span id="LC30" class="line" lang="plaintext"> <span class="idiff left right"> </span>DOI: 10.1093/bioinformatics/btt219</span>
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<td class="diff-line-num old old_line" data-linenumber="31" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
31
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<pre style="margin: 0;">-<span id="LC31" class="line" lang="plaintext"> <span class="idiff left right"> </span>PMID: 23813001</span>
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32
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<pre style="margin: 0;">-<span id="LC32" class="line" lang="plaintext"> <span class="idiff left right"> </span>URL: "https://academic.oup.com/bioinformatics/article-lookup/doi/\</span>
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33
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<pre style="margin: 0;">-<span id="LC33" class="line" lang="plaintext"> <span class="idiff left right"> </span>10.1093/bioinformatics/btt219"</span>
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34
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<pre style="margin: 0;">-<span id="LC34" class="line" lang="plaintext"> <span class="idiff left right"> </span>eprint: "https://academic.oup.com/bioinformatics/article-pdf/\</span>
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<pre style="margin: 0;">-<span id="LC35" class="line" lang="plaintext"> <span class="idiff left right"> </span>29/13/i326/18534891/btt219.pdf"</span>
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2
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="plaintext"> - Author: ></span>
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3
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext"> Yu Peng and Henry C. M. Leung and S. M. Yiu and Francis Y. L. Chin</span>
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4
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext"> Title: ></span>
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5
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext"> IDBA-UD: a de novo assembler for single-cell and metagenomic</span>
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6
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"> sequencing data with highly uneven depth</span>
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7
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"> Journal: Bioinformatics</span>
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8
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext"> Year: 2012</span>
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9
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext"> Volume: 28</span>
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10
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="plaintext"> Number: 11</span>
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11
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="plaintext"> Pages: 1420-1428</span>
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12
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="plaintext"> DOI: 10.1093/bioinformatics/bts174</span>
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13
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="plaintext"> PMID: 22495754</span>
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14
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="plaintext"> URL: http://bioinformatics.oxfordjournals.org/content/28/11/1420.full</span>
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15
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="plaintext"> eprint: "http://bioinformatics.oxfordjournals.org/content/\</span>
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="plaintext"> 28/11/1420.full.pdf+html"</span>
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="plaintext"> - Author: ></span>
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18
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="plaintext"> Yu Peng and Henry C. M. Leung and Siu-Ming Yiu and Ming-Ju Lv and</span>
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19
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="plaintext"> Xin-Guang Zhu and Francis Y. L. Chin</span>
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20
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="plaintext"> Title: ></span>
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21
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<pre style="margin: 0;">+<span id="LC21" class="line" lang="plaintext"> IDBA-tran: a more robust de novo de Bruijn graph assembler for</span>
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22
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<pre style="margin: 0;">+<span id="LC22" class="line" lang="plaintext"> transcriptomes with uneven expression levels</span>
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23
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<pre style="margin: 0;">+<span id="LC23" class="line" lang="plaintext"> Journal: Bioinformatics</span>
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24
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<pre style="margin: 0;">+<span id="LC24" class="line" lang="plaintext"> Year: 2013</span>
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25
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<pre style="margin: 0;">+<span id="LC25" class="line" lang="plaintext"> Month: Jul</span>
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26
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<pre style="margin: 0;">+<span id="LC26" class="line" lang="plaintext"> Day: 1</span>
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27
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<pre style="margin: 0;">+<span id="LC27" class="line" lang="plaintext"> Volume: 29</span>
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<pre style="margin: 0;">+<span id="LC28" class="line" lang="plaintext"> Number: 13</span>
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<pre style="margin: 0;">+<span id="LC29" class="line" lang="plaintext"> Pages: i326-i334</span>
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<pre style="margin: 0;">+<span id="LC30" class="line" lang="plaintext"> DOI: 10.1093/bioinformatics/btt219</span>
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31
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<pre style="margin: 0;">+<span id="LC31" class="line" lang="plaintext"> PMID: 23813001</span>
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<pre style="margin: 0;">+<span id="LC32" class="line" lang="plaintext"> URL: "https://academic.oup.com/bioinformatics/article-lookup/doi/\</span>
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<pre style="margin: 0;">+<span id="LC33" class="line" lang="plaintext"> 10.1093/bioinformatics/btt219"</span>
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<pre style="margin: 0;">+<span id="LC34" class="line" lang="plaintext"> eprint: "https://academic.oup.com/bioinformatics/article-pdf/\</span>
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<pre style="margin: 0;">+<span id="LC35" class="line" lang="plaintext"> 29/13/i326/18534891/btt219.pdf"</span>
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36
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<pre style="margin: 0;"> <span id="LC36" class="line" lang="plaintext">Registry:</span>
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<td class="diff-line-num old old_line" data-linenumber="37" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
37
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<pre style="margin: 0;">-<span id="LC37" class="line" lang="plaintext"> - Name: bio.tools</span>
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<td class="diff-line-num old old_line" data-linenumber="38" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
38
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<pre style="margin: 0;">-<span id="LC38" class="line" lang="plaintext"> Entry: IDBA</span>
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39
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<pre style="margin: 0;">-<span id="LC39" class="line" lang="plaintext"> - Name: OMICtools</span>
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<pre style="margin: 0;">-<span id="LC40" class="line" lang="plaintext"> Entry: OMICS_01423</span>
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<pre style="margin: 0;">-<span id="LC41" class="line" lang="plaintext"> - Name: OMICtools</span>
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<td class="diff-line-num old old_line" data-linenumber="42" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="diff-line-num new_line old" data-linenumber="37" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC42" class="line" lang="plaintext"> Entry: OMICS_01318</span>
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<td class="diff-line-num old old_line" data-linenumber="43" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="diff-line-num new_line old" data-linenumber="37" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC43" class="line" lang="plaintext"> - Name: SciCrunch</span>
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<td class="diff-line-num old old_line" data-linenumber="44" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
44
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<pre style="margin: 0;">-<span id="LC44" class="line" lang="plaintext"> Entry: SCR_011912</span>
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<td class="diff-line-num old old_line" data-linenumber="45" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
45
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<td class="diff-line-num new_line old" data-linenumber="37" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC45" class="line" lang="plaintext"> - Name: conda:bioconda</span>
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<td class="diff-line-num old old_line" data-linenumber="46" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
46
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<pre style="margin: 0;">-<span id="LC46" class="line" lang="plaintext"> Entry: idba</span>
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<td class="diff-line-num old old_line" data-linenumber="47" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
47
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<td class="diff-line-num new_line old" data-linenumber="37" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC47" class="line" lang="plaintext"></span></pre>
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<td class="diff-line-num new old_line" data-linenumber="48" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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37
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<pre style="margin: 0;">+<span id="LC37" class="line" lang="plaintext"> - Name: bio.tools</span>
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<td class="diff-line-num new old_line" data-linenumber="48" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="38" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
38
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<pre style="margin: 0;">+<span id="LC38" class="line" lang="plaintext"> Entry: IDBA</span>
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<td class="diff-line-num new old_line" data-linenumber="48" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="39" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
39
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<pre style="margin: 0;">+<span id="LC39" class="line" lang="plaintext"> - Name: OMICtools</span>
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<td class="diff-line-num new old_line" data-linenumber="48" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="40" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
40
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<pre style="margin: 0;">+<span id="LC40" class="line" lang="plaintext"> Entry: OMICS_01423</span>
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<td class="diff-line-num new old_line" data-linenumber="48" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="41" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
41
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<pre style="margin: 0;">+<span id="LC41" class="line" lang="plaintext"> - Name: OMICtools</span>
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<td class="diff-line-num new old_line" data-linenumber="48" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="42" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
42
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<pre style="margin: 0;">+<span id="LC42" class="line" lang="plaintext"> Entry: OMICS_01318</span>
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<td class="diff-line-num new old_line" data-linenumber="48" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="43" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
43
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<pre style="margin: 0;">+<span id="LC43" class="line" lang="plaintext"> - Name: SciCrunch</span>
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<td class="diff-line-num new old_line" data-linenumber="48" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="44" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
44
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<pre style="margin: 0;">+<span id="LC44" class="line" lang="plaintext"> Entry: SCR_011912</span>
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<td class="diff-line-num new old_line" data-linenumber="48" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="45" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
45
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<pre style="margin: 0;">+<span id="LC45" class="line" lang="plaintext"> - Name: conda:bioconda</span>
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<td class="diff-line-num new old_line" data-linenumber="48" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="46" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
46
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<pre style="margin: 0;">+<span id="LC46" class="line" lang="plaintext"> Entry: idba</span></pre>
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