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<h3>
Shayan Doust pushed to branch master
at <a href="https://salsa.debian.org/med-team/megahit">Debian Med / megahit</a>
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<h4>
Commits:
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<strong><a href="https://salsa.debian.org/med-team/megahit/commit/1c94341e89f4446841b41fd3d899895c0e1de914">1c94341e</a></strong>
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<span>by Shayan Doust</span>
<i>at 2019-10-31T14:37:15Z</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Remove old patch no longer needed in this upstream version
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<h4>1 changed file:</h4>
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<a href="#16c460cde22536759ae04c25443db3e3073df627">
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−
debian/patches/fix_src_packed_field.patch
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<h4>Changes:</h4>
<li id="16c460cde22536759ae04c25443db3e3073df627">
<a href="https://salsa.debian.org/med-team/megahit/commit/1c94341e89f4446841b41fd3d899895c0e1de914#16c460cde22536759ae04c25443db3e3073df627"><strong>debian/patches/fix_src_packed_field.patch</strong>
deleted
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="diff"><span class="p">Description: patch header file due to compilation error</span></span>
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<pre style="margin: 0;">-<span id="LC2" class="line" lang="diff"> Within pbuilder, compiler complains of "cannot bind packed field", so create a clone of the variables as auto.</span>
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<pre style="margin: 0;">-<span id="LC3" class="line" lang="diff"><span class="p">Author: Shayan Doust <hello@shayandoust.me></span></span>
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<pre style="margin: 0;">-<span id="LC4" class="line" lang="diff"><span class="p">Last-Update: 2019-10-11</span></span>
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="diff"><span class="p">---</span></span>
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="diff"></span>
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<pre style="margin: 0;">-<span id="LC7" class="line" lang="diff">Index: megahit/src/sequence/kmer.h</span>
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<pre style="margin: 0;">-<span id="LC8" class="line" lang="diff"><span class="gh" style="color: #999;">===================================================================</span></span>
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<pre style="margin: 0;">-<span id="LC9" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- megahit.orig/src/sequence/kmer.h 2019-10-21 11:34:23.623134886 +0100</span></span>
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<pre style="margin: 0;">-<span id="LC10" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ megahit/src/sequence/kmer.h 2019-10-21 11:34:51.959024968 +0100</span></span>
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<pre style="margin: 0;">-<span id="LC11" class="line" lang="diff"><span class="p">@@ -113,7 +113,9 @@</span></span>
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<pre style="margin: 0;">-<span id="LC12" class="line" lang="diff"> }</span>
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<pre style="margin: 0;">-<span id="LC13" class="line" lang="diff"> </span>
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<pre style="margin: 0;">-<span id="LC14" class="line" lang="diff"> for (unsigned i = 0; i + i < used_words; ++i) {</span>
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<pre style="margin: 0;">-<span id="LC15" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- std::swap(data_[i], data_[used_words - 1 - i]);</span></span>
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<pre style="margin: 0;">-<span id="LC16" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ Kmer<1, long unsigned int>::word_type a = data_[i];</span></span>
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<pre style="margin: 0;">-<span id="LC17" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ Kmer<1, long unsigned int>::word_type b = data_[used_words - 1 - i];</span></span>
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<pre style="margin: 0;">-<span id="LC18" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ std::swap(a, b);</span></span>
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<pre style="margin: 0;">-<span id="LC19" class="line" lang="diff"> }</span>
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<pre style="margin: 0;">-<span id="LC20" class="line" lang="diff"> </span>
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<pre style="margin: 0;">-<span id="LC21" class="line" lang="diff"> if ((k % kCharsPerWord) != 0) {</span></pre>
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