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<h3>
Steffen Möller pushed to branch master
at <a href="https://salsa.debian.org/med-team/diamond-aligner">Debian Med / diamond-aligner</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/diamond-aligner/commit/8da09bec3ac82c7d12a0fd0ddba9f3fe2f633847">8da09bec</a></strong>
<div>
<span>by Steffen Moeller</span>
<i>at 2019-11-08T18:27:23Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 0.9.28+dfsg</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/diamond-aligner/commit/53ad7bd89bb3ccc81adcd68b5540a369f606c523">53ad7bd8</a></strong>
<div>
<span>by Steffen Moeller</span>
<i>at 2019-11-08T18:27:23Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/0.9.28+dfsg'
Update to upstream version '0.9.28+dfsg'
with Debian dir f9743a6f1554ce1395a26e186129d071530cf47c</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/diamond-aligner/commit/def355ccd921b9829703552fa60ecc6f8a1481a8">def355cc</a></strong>
<div>
<span>by Steffen Moeller</span>
<i>at 2019-11-08T18:30:50Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version.
</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#9a2aa4db38d3115ed60da621e012c0efc0172aae">
CMakeLists.txt
</a>
</li>
<li class="file-stats">
<a href="#8ec9a00bfd09b3190ac6b22251dbb1aa95a0579d">
README.md
</a>
</li>
<li class="file-stats">
<a href="#32d9e95f00ee666c09c6aa675993f5e25887ecaa">
build_simple.sh
</a>
</li>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
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</li>
<li class="file-stats">
<a href="#a843f1917fbc7b44df009557ff4d2e9bfb456b58">
<span class="deleted-file">
−
debian/patches/no_march_native.patch
</span>
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</li>
<li class="file-stats">
<a href="#bc34014ab4b9a49dd7a27bdd8d352912607c3a96">
debian/patches/series
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</li>
<li class="file-stats">
<a href="#ba308c53c268704c3008f5e2e6e8129f9f6bf3fe">
src/ChangeLog
</a>
</li>
<li class="file-stats">
<a href="#f76380e3e66f9453de89e5ac198478544cf1e6e4">
src/align/align.cpp
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</li>
<li class="file-stats">
<a href="#c8d7bd122d50035cfb1627dbd9659f00b8137ded">
src/align/banded_swipe_pipeline.cpp
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</li>
<li class="file-stats">
<a href="#633a6c17b2a98479834558229cc20e2ad3de2c8d">
src/align/swipe_pipeline.cpp
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</li>
<li class="file-stats">
<a href="#76d5a97c09cca591280144de40f9c04a5ec57ef7">
src/basic/basic.cpp
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</li>
<li class="file-stats">
<a href="#fe8c534c15ea9cf93547993244c3ab903c4895ff">
src/basic/config.cpp
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</li>
<li class="file-stats">
<a href="#79a175a8b141cc4f06683108fcd39b79a555f1cd">
src/basic/config.h
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</li>
<li class="file-stats">
<a href="#da280a51d91809345347036c4e31920b2c744ab7">
src/basic/const.h
</a>
</li>
<li class="file-stats">
<a href="#f9492756ecc3a6486c8d8a74972ab3c60ae604a2">
src/basic/match.h
</a>
</li>
<li class="file-stats">
<a href="#3acb533977ddcbc123b4fc5fa6a1f7d171564189">
src/basic/reduction.h
</a>
</li>
<li class="file-stats">
<a href="#c37d770cc180a4c51d177941b1090e906642b4fe">
src/basic/score_matrix.cpp
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</li>
<li class="file-stats">
<a href="#eeb9c797e717eb3e4f468bca3e84923ae3c9a8db">
src/basic/shape.h
</a>
</li>
<li class="file-stats">
<a href="#02748963ebfdb263f232fa8cc7afc742d6771e86">
src/basic/statistics.h
</a>
</li>
<li class="file-stats">
<a href="#44bd35630fcea8d64717239d4408e33f330b31b5">
src/data/frequent_seeds.cpp
</a>
</li>
<li class="file-stats">
<a href="#c031a2c7ef48b61e3ca4b09e23214c4199242517">
src/data/frequent_seeds.h
</a>
</li>
<li class="file-stats">
<a href="#014dfaf8cf9e7273c863c02dd9dd7a67f85fffea">
src/data/metadata.h
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</li>
<li class="file-stats">
<a href="#bfd49bad75db28a3df2bf8624b35b71534101ad3">
src/data/queries.h
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</li>
<li class="file-stats">
<a href="#8366fdef1b3e7c06b4325bf704ef6a9a25477168">
src/data/seed_array.cpp
</a>
</li>
<li class="file-stats">
<a href="#4d74b3b7d5a1f59aa02245bde00681d093e8d8a3">
src/data/seed_array.h
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</li>
<li class="file-stats">
<a href="#ba1fe9d599e92a9d975e18977693af394d3b027a">
src/data/seed_histogram.h
</a>
</li>
<li class="file-stats">
<a href="#c50ff62781b6da11f519926a60035fed010fe8b4">
src/data/seed_set.h
</a>
</li>
<li class="file-stats">
<a href="#16635972c382ed827f2d64ccde2e6e3c945996d2">
<span class="deleted-file">
−
src/data/sorted_list.h
</span>
</a>
</li>
<li class="file-stats">
<a href="#a0fd434dbcb3b985a7a23257cbee2d7f05729425">
src/data/taxonomy.h
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
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