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<h3>
Michael R. Crusoe pushed to branch master
at <a href="https://salsa.debian.org/med-team/python-pysam">Debian Med / python-pysam</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-pysam/commit/169a628899d883a30944ece2535f066881671cf4">169a6288</a></strong>
<div>
<span>by Michael R. Crusoe</span>
<i>at 2019-08-06T17:37:29Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 0.15.3+ds</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-pysam/commit/48e9c2b183cbca08fc096a6c717e8e915ac1a5ac">48e9c2b1</a></strong>
<div>
<span>by Michael R. Crusoe</span>
<i>at 2019-08-06T17:37:37Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/0.15.3+ds'
Update to upstream version '0.15.3+ds'
with Debian dir 307bac42b790b1d11795bf9ce3e9403377717f16</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-pysam/commit/1e17004971507b2733cf4283480832b49c8108f8">1e170049</a></strong>
<div>
<span>by Michael R. Crusoe</span>
<i>at 2019-08-06T17:41:03Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">0.15.3+ds-1
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-pysam/commit/feea4660e2dfdd2702594e1eee0bae3c53c6d3cb">feea4660</a></strong>
<div>
<span>by Michael R. Crusoe</span>
<i>at 2019-08-06T17:54:19Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">drop python2
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-pysam/commit/fbb8276b32a9aafe3d0b58e7bbb55b2a37cf2ea6">fbb8276b</a></strong>
<div>
<span>by Michael R. Crusoe</span>
<i>at 2019-11-17T16:34:03Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Revert "drop python2"
This reverts commit feea4660e2dfdd2702594e1eee0bae3c53c6d3cb.
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-pysam/commit/d302ec3a8d11809c0086f82f36b47a302c42ab6a">d302ec3a</a></strong>
<div>
<span>by Michael R. Crusoe</span>
<i>at 2019-11-17T16:35:26Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">document why we aren't dropping py2 yet
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-pysam/commit/35e12040800f62fbe3c2da9aaae6c745bccf466d">35e12040</a></strong>
<div>
<span>by Michael R. Crusoe</span>
<i>at 2019-11-17T16:36:53Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">debhelper-compat 12
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-pysam/commit/ea7ea6818fd4cc1b2c3e5ff7c077998b93229059">ea7ea681</a></strong>
<div>
<span>by Michael R. Crusoe</span>
<i>at 2019-11-17T16:37:04Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Standards-Version: 4.4.0
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-pysam/commit/c00a31ea78fd42cabc90a4d166c74677815c62ce">c00a31ea</a></strong>
<div>
<span>by Michael R. Crusoe</span>
<i>at 2019-11-17T16:37:05Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Trim trailing whitespace.
Fixes lintian: file-contains-trailing-whitespace
See https://lintian.debian.org/tags/file-contains-trailing-whitespace.html for more details.
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-pysam/commit/e11ce0dcc6bdb015c0015b0c9b50e1f63fa85d3c">e11ce0dc</a></strong>
<div>
<span>by Michael R. Crusoe</span>
<i>at 2019-11-17T16:37:11Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Use secure URI in Homepage field.
Fixes lintian: homepage-field-uses-insecure-uri
See https://lintian.debian.org/tags/homepage-field-uses-insecure-uri.html for more details.
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-pysam/commit/58b1a07931372a0c95aa5a562caed47f7c4a66d9">58b1a079</a></strong>
<div>
<span>by Michael R. Crusoe</span>
<i>at 2019-11-17T16:37:13Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Set upstream metadata fields: Repository.</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-pysam/commit/c7d31c59e10cae3d076a6ef1e09c9d27c653af98">c7d31c59</a></strong>
<div>
<span>by Michael R. Crusoe</span>
<i>at 2019-11-17T17:37:21Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">remove unused autopkgtests
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-pysam/commit/a54a17724b162b43b561c86a871e92006e87f97a">a54a1772</a></strong>
<div>
<span>by Michael R. Crusoe</span>
<i>at 2019-11-17T17:38:56Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">set HOME for autopkgtests
</pre>
</li>
</ul>
<h4>30 changed files:</h4>
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<a href="#a5cc2925ca8258af241be7e5b0381edf30266302">
.gitignore
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<a href="#dea01dd89a3b602828e630677fde5d77c06441c8">
.travis.yml
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<a href="#9f621eb5fd3bcb2fa5c7bd228c9b1ad42edc46c8">
NEWS
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<a href="#561b88e19de321ca62c7590bbb350765fb110905">
README.rst
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<a href="#dcbf5d862f73e0b8009ca21756e0653995c68054">
bcftools/bcftools.pysam.c
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<a href="#0dd5d0dba97ac3f2f776b5f876ba12d31d6b9e0a">
bcftools/bcftools.pysam.h
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<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
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debian/compat
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debian/control
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debian/patches/series
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debian/patches/skip_test_needing_missing_data.patch
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debian/patches/skip_test_remote.patch
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<a href="#e4c19aed51618bf0c7ebd03189c67e422f84d4eb">
debian/patches/spelling
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debian/patches/test_index_not_compression
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debian/rules
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debian/tests/control
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debian/tests/run-nose3-tests
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debian/upstream/metadata
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<a href="#3550e55e66cca573239959ebead5cf362e9c2ce4">
devtools/buildwheels.sh
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<a href="#5e102073357f7a49ee828f914cfbabbb138b97bf">
devtools/import.py
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devtools/run_tests_travis.sh
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<a href="#cb342c6815d4fbd8ef564a526e9dbd697d2bde40">
doc/api.rst
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doc/glossary.rst
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<a href="#3fde0b6affdde9e1563e335095509d690ada8729">
doc/release.rst
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<a href="#8d35ba8784713d5b8c7e518bcf88c6cd5580496e">
doc/usage.rst
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<a href="#35af0f6d082b3a8b851c0b34bc2ef9c1a0917fd3">
import/pysam.c
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<a href="#d12609d0b6ed3786d8442d7753874546fdd80025">
import/pysam.h
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<a href="#18f3a3c6e8037b0ca15e228b0ea78b637deab612">
pysam/htslib_util.h
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<a href="#42bbe5c7089864cf1ecf264d1f8b1efaba7c15e4">
pysam/libcalignedsegment.pxd
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<h5>The diff was not included because it is too large.</h5>
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