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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/unicycler">Debian Med / unicycler</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/unicycler/commit/4325cc32e45c68662ae768a9f55b8f16671376cd">4325cc32</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2019-11-18T15:36:01Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Versioned (Build-)Depends of Python3 enabled spades
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/unicycler/commit/1c8150f7f96f21236f01098c59765ffb4f744513">1c8150f7</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2019-11-18T15:36:38Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">(Build-)Depends: miniasm
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/unicycler/commit/5e0ac61653931fead4260da3c101cf3f82effc8c">5e0ac616</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2019-11-18T16:00:45Z</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Upload to unstable
</pre>
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<h4>2 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
</a>
</li>
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<h4>Changes:</h4>
<li id="9c96da0e9f91d7d8937b69b524702c106258f0d1">
<a href="https://salsa.debian.org/med-team/unicycler/compare/3eec66f7a92c884fe1d458a0fa46575fe6e0790e...5e0ac61653931fead4260da3c101cf3f82effc8c#9c96da0e9f91d7d8937b69b524702c106258f0d1"><strong>debian/changelog</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">unicycler (0.4.8+dfsg-1) <span class="idiff left right">UNRELEASED</span>; urgency=medium</span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">unicycler (0.4.8+dfsg-1) <span class="idiff left right">unstable</span>; urgency=medium</span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext"> [ Michael R. Crusoe ]</span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext"> * Inherit and use LDFLAGS and CPPFLAGS</span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="10" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="10" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -10,9 +10,10 @@ unicycler (0.4.8+dfsg-1) UNRELEASED; urgency=medium</td>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext"> * debhelper-compat 12</span>
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<td class="diff-line-num old_line" data-linenumber="11" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="plaintext"> * Standards-Version: 4.4.1</span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="plaintext"> * Set upstream metadata fields: Repository.</span>
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<pre style="margin: 0;">-<span id="LC13" class="line" lang="plaintext"> * (Build-)Depends: bcftools</span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="plaintext"> * (Build-)Depends: bcftools, miniasm</span>
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="plaintext"> * Versioned (Build-)Depends of Python3 enabled spades</span>
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<pre style="margin: 0;"> <span id="LC15" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC15" class="line" lang="plaintext"> -- Andreas Tille <tille@debian.org> <span class="idiff left right">Tue, 12 Nov 2019 16:01:56</span> +0100</span>
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="plaintext"> -- Andreas Tille <tille@debian.org> <span class="idiff left right">Mon, 18 Nov 2019 16:48:24</span> +0100</span>
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<pre style="margin: 0;"> <span id="LC17" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="plaintext">unicycler (0.4.7+dfsg-2) unstable; urgency=medium</span>
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<pre style="margin: 0;"> <span id="LC19" class="line" lang="plaintext"></span>
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<li id="58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
<a href="https://salsa.debian.org/med-team/unicycler/compare/3eec66f7a92c884fe1d458a0fa46575fe6e0790e...5e0ac61653931fead4260da3c101cf3f82effc8c#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2"><strong>debian/control</strong></a>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="11" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -11,11 +11,12 @@ Build-Depends: debhelper-compat (= 12),</td>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="plaintext"> default-jdk,</span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="plaintext"> bcftools,</span>
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="plaintext"> bowtie2,</span>
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14
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="plaintext"> miniasm,</span>
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14
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15
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<pre style="margin: 0;"> <span id="LC15" class="line" lang="plaintext"> ncbi-blast+,</span>
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15
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<td class="diff-line-num new_line" data-linenumber="16" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
16
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<pre style="margin: 0;"> <span id="LC16" class="line" lang="plaintext"> pilon,</span>
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16
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<td class="diff-line-num new_line" data-linenumber="17" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
17
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<pre style="margin: 0;"> <span id="LC17" class="line" lang="plaintext"> racon,</span>
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17
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<td class="diff-line-num new_line" data-linenumber="18" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
18
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="plaintext"> samtools,</span>
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18
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<td class="diff-line-num new_line old" data-linenumber="19" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC18" class="line" lang="plaintext"> spades,</span>
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<td class="diff-line-num new old_line" data-linenumber="19" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<td class="diff-line-num new new_line" data-linenumber="19" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
19
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="plaintext"> spades<span class="idiff left right"> (>= 3.13.1)</span>,</span>
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19
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<td class="diff-line-num new_line" data-linenumber="20" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
20
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<pre style="margin: 0;"> <span id="LC20" class="line" lang="plaintext"> libseqan2-dev,</span>
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20
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<td class="diff-line-num new_line" data-linenumber="21" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
21
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<pre style="margin: 0;"> <span id="LC21" class="line" lang="plaintext"> zlib1g-dev</span>
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<td class="diff-line-num old_line" data-linenumber="21" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
21
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<td class="diff-line-num new_line" data-linenumber="22" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
22
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<pre style="margin: 0;"> <span id="LC22" class="line" lang="plaintext">Standards-Version: 4.4.1</span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="32" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="33" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -32,11 +33,12 @@ Depends: ${python3:Depends},</td>
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32
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33
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<pre style="margin: 0;"> <span id="LC33" class="line" lang="plaintext"> default-jre,</span>
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33
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34
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<pre style="margin: 0;"> <span id="LC34" class="line" lang="plaintext"> bcftools,</span>
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34
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35
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<pre style="margin: 0;"> <span id="LC35" class="line" lang="plaintext"> bowtie2,</span>
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36
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<pre style="margin: 0;">+<span id="LC36" class="line" lang="plaintext"> miniasm,</span>
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35
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37
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<pre style="margin: 0;"> <span id="LC37" class="line" lang="plaintext"> ncbi-blast+,</span>
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36
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<td class="diff-line-num new_line" data-linenumber="38" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC38" class="line" lang="plaintext"> pilon,</span>
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37
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<pre style="margin: 0;"> <span id="LC39" class="line" lang="plaintext"> racon,</span>
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38
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40
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<pre style="margin: 0;"> <span id="LC40" class="line" lang="plaintext"> samtools,</span>
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39
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<pre style="margin: 0;">-<span id="LC39" class="line" lang="plaintext"> spades</span>
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41
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<pre style="margin: 0;">+<span id="LC41" class="line" lang="plaintext"> spades<span class="idiff left right"> (>= 3.13.1)</span></span>
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40
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42
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<pre style="margin: 0;"> <span id="LC42" class="line" lang="plaintext">Recommends: unicycler-data</span>
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41
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<pre style="margin: 0;"> <span id="LC43" class="line" lang="plaintext">Description: hybrid assembly pipeline for bacterial genomes</span>
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42
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<pre style="margin: 0;"> <span id="LC44" class="line" lang="plaintext"> Unicycler is an assembly pipeline for bacterial genomes. It can assemble</span>
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