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<h3>
Steffen Möller pushed to branch master
at <a href="https://salsa.debian.org/med-team/bio-tradis">Debian Med / bio-tradis</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/bio-tradis/commit/abd52a0838daf9d8a6d30adc6f68152b08506291">abd52a08</a></strong>
<div>
<span>by Steffen Moeller</span>
<i>at 2019-12-04T15:34:37Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bio-tradis/commit/f8a4da0d2c559d6d9f0579a660036ef7681efb14">f8a4da0d</a></strong>
<div>
<span>by Steffen Moeller</span>
<i>at 2019-12-04T15:34:38Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 1.4.5+dfsg</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bio-tradis/commit/e347d3ecc947f5a706509ca9b2d3e4490dcec400">e347d3ec</a></strong>
<div>
<span>by Steffen Moeller</span>
<i>at 2019-12-04T15:34:48Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/1.4.5+dfsg'
Update to upstream version '1.4.5+dfsg'
with Debian dir a4728b6ad2efdd70d23de73edda832fc91c91ea8</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bio-tradis/commit/e8ace60d1ff61da0d3906d19c69e57dced1f3b6e">e8ace60d</a></strong>
<div>
<span>by Steffen Moeller</span>
<i>at 2019-12-04T15:34:48Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">debhelper-compat 12
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bio-tradis/commit/52ffe91a220901ab19e7fb998140223b65b3bcb3">52ffe91a</a></strong>
<div>
<span>by Steffen Moeller</span>
<i>at 2019-12-04T15:34:51Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Standards-Version: 4.4.1
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bio-tradis/commit/96635a541b0cf33fc67f30e2a7d232302fb25a30">96635a54</a></strong>
<div>
<span>by Steffen Moeller</span>
<i>at 2019-12-04T15:37:10Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Respect DEB_BUILD_OPTIONS in override_dh_auto_test target
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bio-tradis/commit/1241b05c3d4428724003ac050b204ca3e618861a">1241b05c</a></strong>
<div>
<span>by Steffen Moeller</span>
<i>at 2019-12-04T15:37:11Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Set upstream metadata fields: Repository, Repository-Browse.</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bio-tradis/commit/ebd72bea260641088b8e0ab35186bfc7bd4bb84f">ebd72bea</a></strong>
<div>
<span>by Steffen Moeller</span>
<i>at 2019-12-04T15:38:28Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Upload of new upstream version
</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#24139dae656713ba861751fb2c2ac38839349a7a">
<span class="new-file">
+
.gitattributes
</span>
</a>
</li>
<li class="file-stats">
<a href="#a5cc2925ca8258af241be7e5b0381edf30266302">
.gitignore
</a>
</li>
<li class="file-stats">
<a href="#dea01dd89a3b602828e630677fde5d77c06441c8">
.travis.yml
</a>
</li>
<li class="file-stats">
<a href="#ab09011fa121d0a2bb9fa4ca76094f2482b902b7">
<span class="new-file">
+
CHANGELOG.md
</span>
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<li class="file-stats">
<a href="#6651ddff6eb82c840ced7c1dddee15c6e1913dd4">
Dockerfile
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<li class="file-stats">
<a href="#8ec9a00bfd09b3190ac6b22251dbb1aa95a0579d">
README.md
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</li>
<li class="file-stats">
<a href="#2adb506dde5344c619e16c633cffc148ab3ba865">
<span class="new-file">
+
bcinstall.log
</span>
</a>
</li>
<li class="file-stats">
<a href="#81645ed5f27bccb3ab6261f4c13aeca58ecc6a58">
bin/add_tradis_tags
</a>
</li>
<li class="file-stats">
<a href="#d48366df885ae2da582dc55c1a9b9e6663127f5b">
bin/bacteria_tradis
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</li>
<li class="file-stats">
<a href="#5a8e0ccd7bffcf378d1d7afd2aaf5fc3e0319f80">
bin/check_tradis_tags
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</li>
<li class="file-stats">
<a href="#554158421cd3b66be2894962766124f0bd1dee03">
bin/combine_tradis_plots
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</li>
<li class="file-stats">
<a href="#639797a3126173ec38c7047473df75eabc4c36a3">
bin/filter_tradis_tags
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</li>
<li class="file-stats">
<a href="#fa4b5f40575b12a8583f71ab93c177c8f5d79c75">
bin/remove_tradis_tags
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</li>
<li class="file-stats">
<a href="#fff529c3c5508fd38e4fcd05d9857da95f4b069c">
bin/tradis_comparison.R
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</li>
<li class="file-stats">
<a href="#8023f7fb5e00053c5853e6c4373ee2d352f26a2d">
bin/tradis_gene_insert_sites
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</li>
<li class="file-stats">
<a href="#45e9dd31c8bbe43f50dd80a3c615637e6487fbb4">
bin/tradis_merge_plots
</a>
</li>
<li class="file-stats">
<a href="#847b4741c44447d4ff8cdc481d69dfbe0b756776">
bin/tradis_plot
</a>
</li>
<li class="file-stats">
<a href="#ee88c90ca099166b4e174362a9e2961ca2a4c690">
<span class="new-file">
+
build/bwa-0.7.17.tbz
</span>
</a>
</li>
<li class="file-stats">
<a href="#6f234dcebf1419eb84e4433d78392b5acc9f4a59">
<span class="new-file">
+
build/samtools-1.3.tbz
</span>
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</li>
<li class="file-stats">
<a href="#26660eed9a6df1bc81bef9715617070913d86958">
<span class="new-file">
+
build/smalt-0.7.6.tgz
</span>
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</li>
<li class="file-stats">
<a href="#f4c6ef705f1d6466b96174bffbec37b70a8fbb11">
<span class="new-file">
+
build/tabix-master.tgz
</span>
</a>
</li>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#78fd675df1cf8c2d4c62ae1a9a912d15c8c50ba4">
<span class="deleted-file">
−
debian/compat
</span>
</a>
</li>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
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</li>
<li class="file-stats">
<a href="#8756c63497c8dc39f7773438edf53b220c773f67">
debian/rules
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</li>
<li class="file-stats">
<a href="#f5606a935d95a2f20059a7ac1136f47b2edadbf6">
debian/upstream/metadata
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<li class="file-stats">
<a href="#384adeead2ae33537082bc3db4b10a27220e76ca">
dist.ini
</a>
</li>
<li class="file-stats">
<a href="#58db356d9e8caa509e2c0b01ad695756114c19e9">
install_dependencies.sh
</a>
</li>
<li class="file-stats">
<a href="#25b2eb9d7c4dc64539c1ea2cf3ab7966e5ddca2e">
lib/Bio/Tradis/CommandLine/RunMapping.pm
</a>
</li>
<li class="file-stats">
<a href="#7c07858b1cb5eaaf3ecc0aa0924bfe26fd6dd9a7">
lib/Bio/Tradis/CommandLine/TradisAnalysis.pm
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
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<p style="font-size: small; color: #777;">
—
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<a href="https://salsa.debian.org/med-team/bio-tradis/compare/9df2e7bc789aadfba670d174bdda52708b436284...ebd72bea260641088b8e0ab35186bfc7bd4bb84f">View it on GitLab</a>.
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