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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/seqan">Debian Med / seqan</a>
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<h4>
Commits:
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<ul>
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<strong><a href="https://salsa.debian.org/med-team/seqan/commit/31cb70a2a28ae39cf0d0bc87682ebbc495acecf9">31cb70a2</a></strong>
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<span>by Andreas Tille</span>
<i>at 2019-12-16T20:44:47Z</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Several tests are failing
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<h4>1 changed file:</h4>
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<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
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<h4>Changes:</h4>
<li id="9c96da0e9f91d7d8937b69b524702c106258f0d1">
<a href="https://salsa.debian.org/med-team/seqan/commit/31cb70a2a28ae39cf0d0bc87682ebbc495acecf9#9c96da0e9f91d7d8937b69b524702c106258f0d1"><strong>debian/changelog</strong></a>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="11" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -11,6 +11,60 @@ seqan (1.4.2+dfsg-4) UNRELEASED; urgency=medium</td>
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11
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="plaintext"> * Remove obsolete fields Contact, Name from debian/upstream/metadata.</span>
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12
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="plaintext"> * Rely on pre-initialized dpkg-architecture variables.</span>
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13
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="plaintext"> TODO:</span>
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<td class="diff-line-num new new_line" data-linenumber="15" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="plaintext"> 52% tests passed, 46 tests failed out of 95</span>
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<td class="diff-line-num new new_line" data-linenumber="16" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="plaintext"> </span>
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<td class="diff-line-num new new_line" data-linenumber="17" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="plaintext"> Total Test time (real) = 9.49 sec</span>
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="plaintext"> The following tests FAILED:</span>
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<td class="diff-line-num new new_line" data-linenumber="20" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="plaintext"> 1 - test_demo_align_align (Failed)</span>
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<td class="diff-line-num new new_line" data-linenumber="21" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC21" class="line" lang="plaintext"> 2 - test_demo_align_compute_alignment_stats (Failed)</span>
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<pre style="margin: 0;">+<span id="LC22" class="line" lang="plaintext"> 3 - test_demo_align_gaps_example (Failed)</span>
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<pre style="margin: 0;">+<span id="LC23" class="line" lang="plaintext"> 4 - test_demo_align_global_alignment_banded (Failed)</span>
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<pre style="margin: 0;">+<span id="LC24" class="line" lang="plaintext"> 5 - test_demo_align_global_alignment_unbanded (Failed)</span>
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<pre style="margin: 0;">+<span id="LC25" class="line" lang="plaintext"> 6 - test_demo_align_integrate_align (Failed)</span>
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<td class="diff-line-num new new_line" data-linenumber="26" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC26" class="line" lang="plaintext"> 7 - test_demo_bam_io_bam_stream (Failed)</span>
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<pre style="margin: 0;">+<span id="LC27" class="line" lang="plaintext"> 8 - test_demo_find_finder_index (Failed)</span>
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<pre style="margin: 0;">+<span id="LC28" class="line" lang="plaintext"> 9 - test_demo_find_finder_online (Failed)</span>
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<pre style="margin: 0;">+<span id="LC29" class="line" lang="plaintext"> 10 - test_demo_graph_graph_algo_dijkstra (Failed)</span>
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<pre style="margin: 0;">+<span id="LC30" class="line" lang="plaintext"> 11 - test_demo_graph_algorithms_all_pairs_shortest_path (Failed)</span>
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<pre style="margin: 0;">+<span id="LC31" class="line" lang="plaintext"> 12 - test_demo_graph_algorithms_bellman_ford_algorithm (Failed)</span>
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<pre style="margin: 0;">+<span id="LC32" class="line" lang="plaintext"> 13 - test_demo_graph_algorithms_breadth_first_search (Failed)</span>
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<pre style="margin: 0;">+<span id="LC33" class="line" lang="plaintext"> 14 - test_demo_graph_algorithms_dag_shortest_path (Failed)</span>
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<pre style="margin: 0;">+<span id="LC34" class="line" lang="plaintext"> 15 - test_demo_graph_algorithms_depth_first_search (Failed)</span>
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<pre style="margin: 0;">+<span id="LC35" class="line" lang="plaintext"> 16 - test_demo_graph_algorithms_dijkstra (Failed)</span>
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<pre style="margin: 0;">+<span id="LC36" class="line" lang="plaintext"> 17 - test_demo_graph_algorithms_floyd_warshall_algorithm (Failed)</span>
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37
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<pre style="margin: 0;">+<span id="LC37" class="line" lang="plaintext"> 18 - test_demo_graph_algorithms_ford_fulkerson_algorithm (Failed)</span>
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38
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<pre style="margin: 0;">+<span id="LC38" class="line" lang="plaintext"> 19 - test_demo_graph_algorithms_kruskals_algorithm (Failed)</span>
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39
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<pre style="margin: 0;">+<span id="LC39" class="line" lang="plaintext"> 20 - test_demo_graph_algorithms_prims_algorithm (Failed)</span>
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<pre style="margin: 0;">+<span id="LC40" class="line" lang="plaintext"> 21 - test_demo_graph_algorithms_strongly_connected_components (Failed)</span>
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41
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<pre style="margin: 0;">+<span id="LC41" class="line" lang="plaintext"> 22 - test_demo_graph_algorithms_topological_sort (Failed)</span>
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42
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<pre style="margin: 0;">+<span id="LC42" class="line" lang="plaintext"> 23 - test_demo_graph_algorithms_transitive_closure (Failed)</span>
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43
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<pre style="margin: 0;">+<span id="LC43" class="line" lang="plaintext"> 24 - test_demo_index_index_begin_atEnd_representative (Failed)</span>
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44
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<pre style="margin: 0;">+<span id="LC44" class="line" lang="plaintext"> 25 - test_demo_index_index_counting (Failed)</span>
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<pre style="margin: 0;">+<span id="LC45" class="line" lang="plaintext"> 26 - test_demo_index_index_finder (Failed)</span>
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<pre style="margin: 0;">+<span id="LC46" class="line" lang="plaintext"> 27 - test_demo_index_index_getOccurrences_getFrequency_range_getFibre (Failed)</span>
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<pre style="margin: 0;">+<span id="LC47" class="line" lang="plaintext"> 28 - test_demo_index_index_iterator (Failed)</span>
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48
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<pre style="margin: 0;">+<span id="LC48" class="line" lang="plaintext"> 29 - test_demo_index_index_iterator_short (Failed)</span>
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49
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<pre style="margin: 0;">+<span id="LC49" class="line" lang="plaintext"> 30 - test_demo_index_index_length_countSequences (Failed)</span>
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<pre style="margin: 0;">+<span id="LC50" class="line" lang="plaintext"> 31 - test_demo_index_index_mummy (Failed)</span>
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51
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<pre style="margin: 0;">+<span id="LC51" class="line" lang="plaintext"> 32 - test_demo_index_index_open_save (Failed)</span>
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52
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<pre style="margin: 0;">+<span id="LC52" class="line" lang="plaintext"> 33 - test_demo_index_index_textAt_indexText_saAt_indexRequire (Failed)</span>
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53
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<pre style="margin: 0;">+<span id="LC53" class="line" lang="plaintext"> 34 - test_demo_input_output_record_reader (Failed)</span>
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54
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<pre style="margin: 0;">+<span id="LC54" class="line" lang="plaintext"> 35 - test_demo_misc_enumerate_strings (Failed)</span>
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55
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<pre style="margin: 0;">+<span id="LC55" class="line" lang="plaintext"> 36 - test_demo_modifier_modified_string (Failed)</span>
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56
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<pre style="margin: 0;">+<span id="LC56" class="line" lang="plaintext"> 37 - test_demo_modifier_modified_string_mod_view (Failed)</span>
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57
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<pre style="margin: 0;">+<span id="LC57" class="line" lang="plaintext"> 38 - test_demo_modifier_modified_string_nested (Failed)</span>
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58
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<pre style="margin: 0;">+<span id="LC58" class="line" lang="plaintext"> 39 - test_demo_score_score (Failed)</span>
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59
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<pre style="margin: 0;">+<span id="LC59" class="line" lang="plaintext"> 40 - test_demo_seeds_seeds_extension (Failed)</span>
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60
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<pre style="margin: 0;">+<span id="LC60" class="line" lang="plaintext"> 41 - test_demo_seq_io_fai_index_example (Failed)</span>
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61
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<pre style="margin: 0;">+<span id="LC61" class="line" lang="plaintext"> 42 - test_demo_seq_io_sequence_stream_read (Failed)</span>
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62
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<pre style="margin: 0;">+<span id="LC62" class="line" lang="plaintext"> 43 - test_demo_sequence_string2 (Failed)</span>
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63
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<pre style="margin: 0;">+<span id="LC63" class="line" lang="plaintext"> 44 - test_demo_sequence_stringset (Failed)</span>
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<pre style="margin: 0;">+<span id="LC64" class="line" lang="plaintext"> 78 - test_test_index_fm (SEGFAULT)</span>
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65
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<pre style="margin: 0;">+<span id="LC65" class="line" lang="plaintext"> 79 - test_test_index_stree_iterators (SEGFAULT)</span>
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<pre style="margin: 0;">+<span id="LC66" class="line" lang="plaintext"> Errors while running CTest</span>
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<pre style="margin: 0;">+<span id="LC67" class="line" lang="plaintext"></span>
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14
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<pre style="margin: 0;"> <span id="LC68" class="line" lang="plaintext"> -- Andreas Tille <tille@debian.org> Mon, 16 Dec 2019 17:19:24 +0100</span>
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15
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<pre style="margin: 0;"> <span id="LC69" class="line" lang="plaintext"></span>
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16
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<pre style="margin: 0;"> <span id="LC70" class="line" lang="plaintext">seqan (1.4.2+dfsg-3) unstable; urgency=medium</span>
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