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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/tnseq-transit">Debian Med / tnseq-transit</a>
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<h4>
Commits:
</h4>
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<li>
<strong><a href="https://salsa.debian.org/med-team/tnseq-transit/commit/b3c70290e798e621b04d8314cba73599042ed53c">b3c70290</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2019-12-17T11:10:31Z</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">(Build-)Depends: python3-pubsub (instead of python3-pypubsub)
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</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/tnseq-transit/commit/038ba42ce4be6de7a00e21ca8864e59591c5fd79">038ba42c</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2019-12-17T11:11:08Z</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Set upstream metadata fields: Bug-Database, Repository, Repository-Browse.</pre>
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<li>
<strong><a href="https://salsa.debian.org/med-team/tnseq-transit/commit/4bb7d9eaaa9addd720b2a3e1d5e89795e5e53f84">4bb7d9ea</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2019-12-17T12:07:14Z</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Upload to unstable
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<h4>3 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
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<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
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<a href="#f5606a935d95a2f20059a7ac1136f47b2edadbf6">
debian/upstream/metadata
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<h4>Changes:</h4>
<li id="9c96da0e9f91d7d8937b69b524702c106258f0d1">
<a href="https://salsa.debian.org/med-team/tnseq-transit/compare/5be51e87d738443c7c39f46b545d6973c59b3157...4bb7d9eaaa9addd720b2a3e1d5e89795e5e53f84#9c96da0e9f91d7d8937b69b524702c106258f0d1"><strong>debian/changelog</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">tnseq-transit (3.0.1-2) unstable; urgency=medium</span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext"> * (Build-)Depends: python3-pubsub (instead of python3-pypubsub)</span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext"> Thanks for the patch to Sebastien Bacher <seb128@ubuntu.com></span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext"> Closes: #946892</span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"> * Set upstream metadata fields: Bug-Database, Repository, Repository-</span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"> Browse.</span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext"> -- Andreas Tille <tille@debian.org> Tue, 17 Dec 2019 12:11:09 +0100</span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="plaintext">tnseq-transit (3.0.1-1) unstable; urgency=medium</span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="plaintext"> [ Andreas Tille ]</span>
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<li id="58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
<a href="https://salsa.debian.org/med-team/tnseq-transit/compare/5be51e87d738443c7c39f46b545d6973c59b3157...4bb7d9eaaa9addd720b2a3e1d5e89795e5e53f84#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2"><strong>debian/control</strong></a>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="12" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="12" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -12,7 +12,7 @@ Build-Depends: debhelper-compat (= 12),</td>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="plaintext"> python3-pil,</span>
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="plaintext"> python3-matplotlib,</span>
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<td class="diff-line-num old_line" data-linenumber="14" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="plaintext"> python3-statsmodels,</span>
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<pre style="margin: 0;">-<span id="LC15" class="line" lang="plaintext"> python3-p<span class="idiff left right">yp</span>ubsub,</span>
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<td class="diff-line-num new old_line" data-linenumber="16" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="plaintext"> python3-pubsub,</span>
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<td class="diff-line-num old_line" data-linenumber="16" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC16" class="line" lang="plaintext"> bwa</span>
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<pre style="margin: 0;"> <span id="LC17" class="line" lang="plaintext">Standards-Version: 4.4.1</span>
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="plaintext">Vcs-Browser: https://salsa.debian.org/med-team/tnseq-transit</span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -28,7 +28,7 @@ Depends: ${python3:Depends},</td>
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<pre style="margin: 0;"> <span id="LC28" class="line" lang="plaintext"> python3-pil,</span>
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<pre style="margin: 0;"> <span id="LC29" class="line" lang="plaintext"> python3-matplotlib,</span>
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<pre style="margin: 0;"> <span id="LC30" class="line" lang="plaintext"> python3-statsmodels,</span>
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<pre style="margin: 0;">-<span id="LC31" class="line" lang="plaintext"> python3-p<span class="idiff left right">yp</span>ubsub,</span>
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<pre style="margin: 0;">+<span id="LC31" class="line" lang="plaintext"> python3-pubsub,</span>
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<pre style="margin: 0;"> <span id="LC32" class="line" lang="plaintext"> python3-wxgtk4.0,</span>
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<pre style="margin: 0;"> <span id="LC33" class="line" lang="plaintext"> bwa</span>
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<pre style="margin: 0;"> <span id="LC34" class="line" lang="plaintext">Breaks: transit</span>
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<li id="f5606a935d95a2f20059a7ac1136f47b2edadbf6">
<a href="https://salsa.debian.org/med-team/tnseq-transit/compare/5be51e87d738443c7c39f46b545d6973c59b3157...4bb7d9eaaa9addd720b2a3e1d5e89795e5e53f84#f5606a935d95a2f20059a7ac1136f47b2edadbf6"><strong>debian/upstream/metadata</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -2,7 +2,7 @@ Reference:</td>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext">- Author: ></span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext"> Michael A. DeJesus and Chaitra Ambadipudi and Richard Baker and</span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext"> Christopher Sassetti and Thomas R. Ioerger</span>
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="plaintext"> Title: <span class="idiff left right">"TRANSIT - A Software Tool for Himar1 TnSeq Analysis"</span></span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext"> Title: <span class="idiff left right">TRANSIT - A Software Tool for Himar1 TnSeq Analysis</span></span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext"> Journal: PLOS</span>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext"> Year: 2015</span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext"> Volume: 11</span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -10,8 +10,8 @@ Reference:</td>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext"> Pages: e1004401</span>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="plaintext"> DOI: 10.1371/journal.pcbi.1004401</span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="plaintext"> PMID: 26447887</span>
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<pre style="margin: 0;">-<span id="LC13" class="line" lang="plaintext"> URL: <span class="idiff left right">"http://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1004401"</span></span>
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<pre style="margin: 0;">-<span id="LC14" class="line" lang="plaintext"> ePrint: <span class="idiff left right">"http://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1004401&type=printable"</span></span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="plaintext"> URL: <span class="idiff left right">http://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1004401</span></span>
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="plaintext"> ePrint: <span class="idiff left right">http://journals.plos.org/ploscompbiol/article/file?id=10.1371/journal.pcbi.1004401&type=printable</span></span>
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<pre style="margin: 0;"> <span id="LC15" class="line" lang="plaintext">Registry:</span>
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<pre style="margin: 0;"> <span id="LC16" class="line" lang="plaintext">- Name: OMICtools</span>
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<pre style="margin: 0;"> <span id="LC17" class="line" lang="plaintext"> Entry: OMICS_10215</span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="21" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -21,4 +21,6 @@ Registry:</td>
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<pre style="margin: 0;"> <span id="LC21" class="line" lang="plaintext"> Entry: NA</span>
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<pre style="margin: 0;"> <span id="LC22" class="line" lang="plaintext">- Name: conda:bioconda</span>
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<pre style="margin: 0;"> <span id="LC23" class="line" lang="plaintext"> Entry: transit</span>
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<pre style="margin: 0;">-<span id="LC24" class="line" lang="plaintext">Repository: https://github.com/mad-lab/transit</span></pre>
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<pre style="margin: 0;">+<span id="LC24" class="line" lang="plaintext">Repository: https://github.com/mad-lab/transit.git</span>
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<pre style="margin: 0;">+<span id="LC25" class="line" lang="plaintext">Bug-Database: https://github.com/mad-lab/transit/issues</span>
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<pre style="margin: 0;">+<span id="LC26" class="line" lang="plaintext">Repository-Browse: https://github.com/mad-lab/transit</span></pre>
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