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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/gatb-core">Debian Med / gatb-core</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/gatb-core/commit/cf4bd1bc5386af27e0dc442a12b5cd02eaf956e0">cf4bd1bc</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2019-12-27T21:03:42Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 1.4.1+git20191209.9398f28+dfsg</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/gatb-core/commit/58421f246cc6c85b56947ac7d8dafdab51ae82d0">58421f24</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2019-12-27T21:03:42Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: New upstream version
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/gatb-core/commit/52e293d0ec88c9f8b79917cc57f5e6d5e5c76788">52e293d0</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2019-12-27T21:03:52Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/1.4.1+git20191209.9398f28+dfsg'
Update to upstream version '1.4.1+git20191209.9398f28+dfsg'
with Debian dir eed94b021fa6ce7fb61ce9c38084a0d81784b30c</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/gatb-core/commit/5e274a080f050b78d8e878bfb644ead3c82de04e">5e274a08</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2019-12-27T21:03:59Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Set upstream metadata fields: Bug-Database, Repository.</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/gatb-core/commit/435ccc218507941291049ae6ea70486cf1ec4d8a">435ccc21</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2019-12-27T21:30:28Z</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: Ready to upload to unstable
</pre>
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<h4>4 changed files:</h4>
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<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
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<li class="file-stats">
<a href="#f5606a935d95a2f20059a7ac1136f47b2edadbf6">
debian/upstream/metadata
</a>
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<li class="file-stats">
<a href="#bd5d0aa0e3679cada9873d94bfe17f9535bf7c1f">
gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp
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<li class="file-stats">
<a href="#d6e7c785a22fb981430b2e12eed55480273715bf">
gatb-core/src/gatb/kmer/impl/RepartitionAlgorithm.cpp
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</li>
</ul>
<h4>Changes:</h4>
<li id="9c96da0e9f91d7d8937b69b524702c106258f0d1">
<a href="https://salsa.debian.org/med-team/gatb-core/compare/c073fe10c4f3cda29922ce015f325da840ec5cd1...435ccc218507941291049ae6ea70486cf1ec4d8a#9c96da0e9f91d7d8937b69b524702c106258f0d1"><strong>debian/changelog</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">gatb-core (1.4.1+git20191209.9398f28+dfsg-1) unstable; urgency=medium</span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="plaintext"></span>
</pre>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext"> * New upstream version</span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext"> * Set upstream metadata fields: Bug-Database, Repository.</span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext"></span>
</pre>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"> -- Andreas Tille <tille@debian.org> Fri, 27 Dec 2019 22:03:59 +0100</span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext">gatb-core (1.4.1+git20191130.664696c+dfsg-1) unstable; urgency=medium</span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext"></span>
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext"> [ Steffen Moeller ]</span>
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<li id="f5606a935d95a2f20059a7ac1136f47b2edadbf6">
<a href="https://salsa.debian.org/med-team/gatb-core/compare/c073fe10c4f3cda29922ce015f325da840ec5cd1...435ccc218507941291049ae6ea70486cf1ec4d8a#f5606a935d95a2f20059a7ac1136f47b2edadbf6"><strong>debian/upstream/metadata</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -16,10 +16,11 @@ Reference:</td>
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<pre style="margin: 0;"> <span id="LC16" class="line" lang="plaintext"> Pages: 2959-2961</span>
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<pre style="margin: 0;"> <span id="LC17" class="line" lang="plaintext"> DOI: 10.1093/bioinformatics/btu406</span>
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<td class="diff-line-num old_line" data-linenumber="18" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="plaintext"> URL: http://dx.doi.org/10.1093/bioinformatics/btu406</span>
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<td class="diff-line-num old old_line" data-linenumber="19" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<pre style="margin: 0;">-<span id="LC19" class="line" lang="plaintext">Repository: https://github.com/GATB/gatb-core</span>
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="plaintext">Repository: https://github.com/GATB/gatb-core<span class="idiff left right">.git</span></span>
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<pre style="margin: 0;"> <span id="LC20" class="line" lang="plaintext">Registry:</span>
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<pre style="margin: 0;"> <span id="LC21" class="line" lang="plaintext">- Name: OMICtools</span>
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<pre style="margin: 0;"> <span id="LC22" class="line" lang="plaintext"> Entry: OMICS_04834</span>
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<pre style="margin: 0;"> <span id="LC23" class="line" lang="plaintext">- Name: conda:bioconda</span>
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<pre style="margin: 0;"> <span id="LC24" class="line" lang="plaintext"> Entry: gatb</span>
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<pre style="margin: 0;"> <span id="LC25" class="line" lang="plaintext">Repository-Browse: https://github.com/GATB/gatb-core</span>
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<pre style="margin: 0;">+<span id="LC26" class="line" lang="plaintext">Bug-Database: https://github.com/GATB/gatb-core/issues</span></pre>
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<a href="https://salsa.debian.org/med-team/gatb-core/compare/c073fe10c4f3cda29922ce015f325da840ec5cd1...435ccc218507941291049ae6ea70486cf1ec4d8a#bd5d0aa0e3679cada9873d94bfe17f9535bf7c1f"><strong>gatb-core/src/gatb/kmer/impl/BloomAlgorithm.cpp</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -45,8 +45,6 @@</td>
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<pre style="margin: 0;"> <span id="LC45" class="line" lang="cpp"><span class="cp" style="color: #999; font-weight: 600;">#include <gatb/tools/math/Integer.hpp></span></span>
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<pre style="margin: 0;"> <span id="LC46" class="line" lang="cpp"><span class="cp" style="color: #999; font-weight: 600;">#include <gatb/tools/math/NativeInt8.hpp></span></span>
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<pre style="margin: 0;"> <span id="LC47" class="line" lang="cpp"></span>
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<pre style="margin: 0;">-<span id="LC48" class="line" lang="cpp"><span class="cp" style="color: #999; font-weight: 600;">#include <gatb/debruijn/impl/ContainerNode.hpp></span></span>
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49
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<pre style="margin: 0;">-<span id="LC49" class="line" lang="cpp"></span>
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<pre style="margin: 0;"> <span id="LC48" class="line" lang="cpp"><span class="cp" style="color: #999; font-weight: 600;">#include <gatb/tools/storage/impl/StorageTools.hpp></span></span>
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<pre style="margin: 0;"> <span id="LC49" class="line" lang="cpp"></span>
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<pre style="margin: 0;"> <span id="LC50" class="line" lang="cpp"><span class="c1" style="color: #998; font-style: italic;">// We use the required packages</span></span>
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<a href="https://salsa.debian.org/med-team/gatb-core/compare/c073fe10c4f3cda29922ce015f325da840ec5cd1...435ccc218507941291049ae6ea70486cf1ec4d8a#d6e7c785a22fb981430b2e12eed55480273715bf"><strong>gatb-core/src/gatb/kmer/impl/RepartitionAlgorithm.cpp</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -48,8 +48,6 @@</td>
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<pre style="margin: 0;"> <span id="LC48" class="line" lang="cpp"><span class="cp" style="color: #999; font-weight: 600;">#include <gatb/tools/math/Integer.hpp></span></span>
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<pre style="margin: 0;"> <span id="LC49" class="line" lang="cpp"><span class="cp" style="color: #999; font-weight: 600;">#include <gatb/tools/math/NativeInt8.hpp></span></span>
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<pre style="margin: 0;"> <span id="LC50" class="line" lang="cpp"></span>
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<pre style="margin: 0;">-<span id="LC51" class="line" lang="cpp"><span class="cp" style="color: #999; font-weight: 600;">#include <gatb/debruijn/impl/ContainerNode.hpp></span></span>
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<pre style="margin: 0;">-<span id="LC52" class="line" lang="cpp"></span>
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<pre style="margin: 0;"> <span id="LC51" class="line" lang="cpp"><span class="cp" style="color: #999; font-weight: 600;">#include <gatb/tools/storage/impl/StorageTools.hpp></span></span>
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<pre style="margin: 0;"> <span id="LC52" class="line" lang="cpp"></span>
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<pre style="margin: 0;"> <span id="LC53" class="line" lang="cpp"><span class="c1" style="color: #998; font-style: italic;">// We use the required packages</span></span>
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