<!DOCTYPE html PUBLIC "-//W3C//DTD HTML 4.0 Transitional//EN" "http://www.w3.org/TR/REC-html40/loose.dtd">
<html lang="en">
<head>
<meta content="text/html; charset=US-ASCII" http-equiv="Content-Type">
<title>
GitLab
</title>



<style>img {
max-width: 100%; height: auto;
}
</style>
</head>
<body>
<div class="content">

<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/python-cogent">Debian Med / python-cogent</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-cogent/commit/06adacd88c3b8f20fd64876776680ee312f8da1a">06adacd8</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-01-07T17:23:32+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 2019.9.13a</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-cogent/commit/fcd569cacabc4823435c54c752fbe27a91f6f592">fcd569ca</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-01-07T17:42:48+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Close bugs
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-cogent/commit/f921df4bc3559e5aba068fbb76ffb76bde8e10c9">f921df4b</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-01-07T20:11:23+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Project moved from bitbucket to github
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-cogent/commit/697033309f73a602722fb8dd2dee958c4ced7053">69703330</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-01-07T20:12:00+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">routine-update: New upstream version
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-cogent/commit/8c762cdb21ddeef430a64a8f5d1e1d41bf68aabd">8c762cdb</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-01-07T20:12:01+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 2019.12.6a</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-cogent/commit/99d61ccd1ad25be3f1ac978da34610478aee0085">99d61ccd</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-01-07T20:12:26+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/2019.12.6a'

Update to upstream version '2019.12.6a'
with Debian dir 546135e306aa17aed51702b3cc5a60ee84b7d669</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-cogent/commit/3b1894cd78aabcd0a85176dd5d9eb56f55f6501a">3b1894cd</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-01-07T20:12:36+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">R-U: Trailing whitespace in debian/changelog
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-cogent/commit/4b7e0fbb2ea74841c8dcda25561a222a21844989">4b7e0fbb</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-01-07T20:12:36+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">R-U: autopkgtest: s/ADTTMP/AUTOPKGTEST_TMP/g
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-cogent/commit/438d90639997d3ff2d5c7f3427f519f6453e6c90">438d9063</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-01-07T20:12:37+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Trim trailing whitespace.

Fixes: lintian: file-contains-trailing-whitespace
See-also: https://lintian.debian.org/tags/file-contains-trailing-whitespace.html
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-cogent/commit/125ed9295e2ec2e29d0384ef07457ab8dbadf91b">125ed929</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-01-07T20:12:38+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Remove duplicate line from changelog.</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-cogent/commit/86db04648e595f8d7ea3d4a44ec0ba2fe6f47ae5">86db0464</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-01-07T20:12:41+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse.</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-cogent/commit/d5166ae0b78b11eb1f3971b02a5c54d4d1591987">d5166ae0</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-01-07T20:12:42+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Fix day-of-week for changelog entry 1.5.3-1.

Fixes: lintian: debian-changelog-has-wrong-day-of-week
See-also: https://lintian.debian.org/tags/debian-changelog-has-wrong-day-of-week.html
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-cogent/commit/06ec519b9bf1cf3af5aadd831584eeced7fc5430">06ec519b</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-01-07T22:03:29+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Fix Build-Depends
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/python-cogent/commit/4911cb9db3a7ed0fc3e63a1bee1f4f16d8833bb7">4911cb9d</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-01-07T22:04:08+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Try fixing sphinx issue by adding sphinx.ext.napoleon
</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#a5cc2925ca8258af241be7e5b0381edf30266302">
.gitignore
</a>
</li>
<li class="file-stats">
<a href="#b650a02deb9f16531aec1c8085f25f4f1e9942de">
<span class="deleted-file">

.hg_archival.txt
</span>
</a>
</li>
<li class="file-stats">
<a href="#39764dc6adbe1c6e740db8636ab21a5f44f41f59">
.hgignore
</a>
</li>
<li class="file-stats">
<a href="#fc1a47a75cc8dc593b20b5e840173df634b008a1">
.hgtags
</a>
</li>
<li class="file-stats">
<a href="#81ccd5c4e1f93eb3ab80c73b5532455bf4f82fe9">
<span class="new-file">
+
.readthedocs.yml
</span>
</a>
</li>
<li class="file-stats">
<a href="#00fe7828d56d7a3ee4030d6cea057cf13f50e70c">
ChangeLog
</a>
</li>
<li class="file-stats">
<a href="#8ec9a00bfd09b3190ac6b22251dbb1aa95a0579d">
README.md
</a>
</li>
<li class="file-stats">
<a href="#40ebc6823f24f296c0cd3fddd6ccda69b74ff2e4">
<span class="new-file">
+
azure-pipelines.yml
</span>
</a>
</li>
<li class="file-stats">
<a href="#ec0a3d38277ad19039d901020e4fa5d40049f131">
<span class="deleted-file">

bitbucket-pipelines.yml
</span>
</a>
</li>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
</a>
</li>
<li class="file-stats">
<a href="#adb7f75f79e3bb85eb62912a2904c5d24af878fb">
debian/copyright
</a>
</li>
<li class="file-stats">
<a href="#bc34014ab4b9a49dd7a27bdd8d352912607c3a96">
<span class="new-file">
+
debian/patches/series
</span>
</a>
</li>
<li class="file-stats">
<a href="#0325e4f25102e77f8a7e2b29dd07d7e574a1b96e">
<span class="new-file">
+
debian/patches/sphinx.patch
</span>
</a>
</li>
<li class="file-stats">
<a href="#8c77cc51b09ef1f7b294222180bcdb53ebb70e2f">
debian/tests/run-unit-test
</a>
</li>
<li class="file-stats">
<a href="#f5606a935d95a2f20059a7ac1136f47b2edadbf6">
debian/upstream/metadata
</a>
</li>
<li class="file-stats">
<a href="#68ef9f98c01c7eecd4c605cc26048a06f3304b79">
debian/watch
</a>
</li>
<li class="file-stats">
<a href="#71b01257bcddf32574fd9ec6e112c45c841491c2">
<span class="deleted-file">

doc/ChangeLog.rst
</span>
</a>
</li>
<li class="file-stats">
<a href="#c86c7a6d9a7bc77f1c375315f47ff6952729ba5b">
doc/Makefile
</a>
</li>
<li class="file-stats">
<a href="#04f66d02749c6d2066bff290735c3bbdc5001840">
<span class="deleted-file">

doc/_static/google_feed.js
</span>
</a>
</li>
<li class="file-stats">
<a href="#79d5b600ac9a002b8918db7d645e16733cb721c0">
<span class="new-file">
+
doc/_static/plotly-latest.min.js
</span>
</a>
</li>
<li class="file-stats">
<a href="#1f82e26b56818e80fce55a90889585a7493c41df">
<span class="new-file">
+
doc/_static/require.min.js
</span>
</a>
</li>
<li class="file-stats">
<a href="#b61d234f05ebbcc0c5a1d4e8643845a778f9bc0f">
<span class="new-file">
+
doc/api/alignment/alignment.rst
</span>
</a>
</li>
<li class="file-stats">
<a href="#6550457d378a3186ed4198dfcbe2ce8ebb5feb16">
<span class="new-file">
+
doc/api/alignment/classes/cogent3.core.alignment.Alignment.rst
</span>
</a>
</li>
<li class="file-stats">
<a href="#1f0e2cb8109205b76ecd66d1287c1378aeeaa4c8">
<span class="new-file">
+
doc/api/alignment/classes/cogent3.core.alignment.ArrayAlignment.rst
</span>
</a>
</li>
<li class="file-stats">
<a href="#350391344c85621c54ee223fab5d5b6750064ec1">
<span class="new-file">
+
doc/api/alignment/classes/cogent3.core.alignment.SequenceCollection.rst
</span>
</a>
</li>
<li class="file-stats">
<a href="#a0b9e8a4bb91dd55bbccd5c52e6a1e9ff4314628">
<span class="new-file">
+
doc/api/index.rst
</span>
</a>
</li>
<li class="file-stats">
<a href="#2ae4b9729fbed384c4f5f37cbefcfe0d97a591fd">
<span class="new-file">
+
doc/api/sequence/classes/cogent3.core.sequence.DnaSequence.rst
</span>
</a>
</li>
<li class="file-stats">
<a href="#777e5dfb548d1931bbfdc508ae7b0be440fb81e2">
<span class="new-file">
+
doc/api/sequence/classes/cogent3.core.sequence.RnaSequence.rst
</span>
</a>
</li>
<li class="file-stats">
<a href="#97b11b16081ff4b3212213b5a3f38d96a88a5b4f">
<span class="new-file">
+
doc/api/sequence/sequence.rst
</span>
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>

</div>
<div class="footer" style="margin-top: 10px;">
<p style="font-size: small; color: #777;">

<br>
<a href="https://salsa.debian.org/med-team/python-cogent/compare/9409f45e8b7d0c78b494e5e9b7378ad683890101...4911cb9db3a7ed0fc3e63a1bee1f4f16d8833bb7">View it on GitLab</a>.
<br>
You're receiving this email because of your account on salsa.debian.org.
If you'd like to receive fewer emails, you can
adjust your notification settings.



</p>
</div>
</body>
</html>