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<h3>
Michael R. Crusoe pushed to branch master
at <a href="https://salsa.debian.org/med-team/bio-tradis">Debian Med / bio-tradis</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/bio-tradis/commit/a73454652be0c27daf043b116f014f7800d36ea3">a7345465</a></strong>
<div>
<span>by Michael R. Crusoe</span>
<i>at 2020-01-11T16:41:24+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Set fields Upstream-Contact in debian/copyright.</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bio-tradis/commit/60e313d601d2c928c3d7da781a8d6699458f3d86">60e313d6</a></strong>
<div>
<span>by Michael R. Crusoe</span>
<i>at 2020-01-11T16:41:24+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Remove obsolete fields Contact from debian/upstream/metadata.</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/bio-tradis/commit/039ffb650083bfffffab050f1925fe56e37067b5">039ffb65</a></strong>
<div>
<span>by Michael R. Crusoe</span>
<i>at 2020-01-11T16:55:56+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">1.4.5+dfsg2-1
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<h4>3 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
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<li class="file-stats">
<a href="#adb7f75f79e3bb85eb62912a2904c5d24af878fb">
debian/copyright
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<li class="file-stats">
<a href="#f5606a935d95a2f20059a7ac1136f47b2edadbf6">
debian/upstream/metadata
</a>
</li>
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<h4>Changes:</h4>
<li id="9c96da0e9f91d7d8937b69b524702c106258f0d1">
<a href="https://salsa.debian.org/med-team/bio-tradis/compare/44b92b97a89b660955cb33e2affaed51fdf24f77...039ffb650083bfffffab050f1925fe56e37067b5#9c96da0e9f91d7d8937b69b524702c106258f0d1"><strong>debian/changelog</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">bio-tradis (1.4.5+dfsg2-1) <span class="idiff left right">UNRELEASED</span>; urgency=medium</span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">bio-tradis (1.4.5+dfsg2-1) <span class="idiff left right">unstable</span>; urgency=medium</span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext"> * Team upload.</span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext"> * debian/patches/samtools1.10: remove version parsing code that can't handle</span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="6" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="6" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -6,8 +6,10 @@ bio-tradis (1.4.5+dfsg2-1) UNRELEASED; urgency=medium</td>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext"> * Switch to cpan for the source</span>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext"> * autopkgtests: ignore the tests that are not yet updated for</span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext"> samtools 1.10.x</span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext"> * Set fields Upstream-Contact in debian/copyright.</span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="plaintext"> * Remove obsolete fields Contact from debian/upstream/metadata.</span>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">-<span id="LC10" class="line" lang="plaintext"> -- Michael R. Crusoe <michael.crusoe@gmail.com> <span class="idiff left right">Wed, 25 Dec 2019 13:28:31</span> +0100</span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="plaintext"> -- Michael R. Crusoe <michael.crusoe@gmail.com> <span class="idiff left right">Sat, 11 Jan 2020 16:41:24</span> +0100</span>
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="plaintext">bio-tradis (1.4.5+dfsg-1) unstable; urgency=medium</span>
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<pre style="margin: 0;"> <span id="LC15" class="line" lang="plaintext"></span>
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<li id="adb7f75f79e3bb85eb62912a2904c5d24af878fb">
<a href="https://salsa.debian.org/med-team/bio-tradis/compare/44b92b97a89b660955cb33e2affaed51fdf24f77...039ffb650083bfffffab050f1925fe56e37067b5#adb7f75f79e3bb85eb62912a2904c5d24af878fb"><strong>debian/copyright</strong></a>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -2,6 +2,7 @@ Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/</td>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext">Upstream-Name: Bio-Tradis</span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext">Source: https://github.com/sanger-pathogens/Bio-Tradis/releases</span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext">Files-Excluded: BioTraDISTutorial.pdf</span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext">Upstream-Contact: Carla Cummins <path-help@sanger.ac.uk></span>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext">Files: *</span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext">Copyright: 2013-2017 Wellcome Trust Sanger Institute</span>
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<a href="https://salsa.debian.org/med-team/bio-tradis/compare/44b92b97a89b660955cb33e2affaed51fdf24f77...039ffb650083bfffffab050f1925fe56e37067b5#f5606a935d95a2f20059a7ac1136f47b2edadbf6"><strong>debian/upstream/metadata</strong></a>
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<pre style="margin: 0;"> <span id="LC1" class="line" lang="plaintext">Archive: CPAN</span>
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<pre style="margin: 0;">-<span id="LC2" class="line" lang="plaintext">Contact: Carla Cummins <path-help@sanger.ac.uk></span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext">Reference:</span>
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<pre style="margin: 0;">-<span id="LC4" class="line" lang="plaintext"> Author: ></span>
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="plaintext"> Lars Barquist and Matthew Mayho and Carla Cummins and Amy K. Cain and</span>
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="plaintext"> Christine J. Boinett and Andrew J. Page and Gemma C. Langridge and</span>
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<pre style="margin: 0;">-<span id="LC7" class="line" lang="plaintext"> Michael A. Quail and Jacqueline A. Keane and Julian Parkhill</span>
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<pre style="margin: 0;">-<span id="LC8" class="line" lang="plaintext"> Title: ></span>
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<pre style="margin: 0;">-<span id="LC9" class="line" lang="plaintext"> The TraDIS toolkit: sequencing and analysis for dense transposon mutant</span>
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<pre style="margin: 0;">-<span id="LC10" class="line" lang="plaintext"> libraries</span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext"> Author: "Lars Barquist and Matthew Mayho and Carla Cummins and Amy K. Cain and Christine\</span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext"> \ J. Boinett and Andrew J. Page and Gemma C. Langridge and Michael A. Quail and\</span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext"> \ Jacqueline A. Keane and Julian Parkhill\n"</span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"> Title: "The TraDIS toolkit: sequencing and analysis for dense transposon mutant\</span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"> \ libraries\n"</span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext"> Journal: Bioinformatics</span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext"> Year: 2016</span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext"> Volume: 32</span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -16,8 +13,7 @@ Reference:</td>
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="plaintext"> DOI: 10.1093/bioinformatics/btw022</span>
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="plaintext"> PMID: 26794317</span>
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<pre style="margin: 0;"> <span id="LC15" class="line" lang="plaintext"> URL: " https://academic.oup.com/bioinformatics/article/32/7/1109/1744349/The-TraDIS-toolkit-sequencing-and-analysis-for"</span>
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<pre style="margin: 0;">-<span id="LC19" class="line" lang="plaintext"> eprint: ></span>
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<pre style="margin: 0;">-<span id="LC20" class="line" lang="plaintext"> https://academic.oup.com/bioinformatics/article-pdf/32/7/1109/10764329/btw022.pdf</span>
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="plaintext"> eprint: "https://academic.oup.com/bioinformatics/article-pdf/32/7/1109/10764329/btw022.pdf\n"</span>
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<pre style="margin: 0;"> <span id="LC17" class="line" lang="plaintext">Registry:</span>
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="plaintext">- Name: OMICtools</span>
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<pre style="margin: 0;"> <span id="LC19" class="line" lang="plaintext"> Entry: OMICS_11083</span>
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