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GitLab

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<h3>

Steffen Möller pushed to branch upstream

at <a href="https://salsa.debian.org/med-team/bedtools">Debian Med / bedtools</a>

</h3>

<h4>

Commits:

</h4>

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<li>

<strong><a href="https://salsa.debian.org/med-team/bedtools/commit/c1be661e554bfbc781d71ec4e39b5959f8edcb39">c1be661e</a></strong>

<div>

<span>by Steffen Moeller</span>

<i>at 2020-01-18T01:44:48+01:00</i>

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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 2.29.2+dfsg</pre>

</li>

</ul>

<h4>30 changed files:</h4>

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<li class="file-stats">

<a href="#c778226b6c4c0fb51cf7942c8ee1f3d9fc1249d0">

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+

.github/workflows/main.yml

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<li class="file-stats">

<a href="#dea01dd89a3b602828e630677fde5d77c06441c8">

<span class="deleted-file">

−

.travis.yml

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<a href="#836efb6e25a091dcb4ff8e1dbb2f0be6a5cbf14c">

Makefile

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<li class="file-stats">

<a href="#254a2da7a740675e537439eb88e32083b9ea4771">

docs/conf.py

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<a href="#7e2c6a8f69d5f4c98b9a6c07bf681f16307a9035">

docs/content/history.rst

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<li class="file-stats">

<a href="#0ad0c9480aebc31dd47d0a136ec23871c6059bca">

docs/content/installation.rst

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<li class="file-stats">

<a href="#6dd5ed69e2042b1d5a311d0f156d323d18bb1fdf">

src/bamToFastq/bamToFastq.cpp

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<li class="file-stats">

<a href="#5273adee83ea252fc53760e8cfe8bd40cac19873">

src/fastaFromBed/fastaFromBed.cpp

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<li class="file-stats">

<a href="#898dc17446790e7f390dcd49b54c263b3ef5ace2">

src/fastaFromBed/fastaFromBed.h

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<a href="#b9ac1ef5c06f5a687e8270854d96caaa92e7ad12">

src/fastaFromBed/fastaFromBedMain.cpp

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<a href="#8aa2d388b7cb97933eea172e8ae760393c3a3bfd">

src/flankBed/flankBed.cpp

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<li class="file-stats">

<a href="#f5bc603105ba9e99e6cb4cc43675451ac83f00cd">

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+

src/flankBed/test.fa

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<li class="file-stats">

<a href="#cb9c7b0923ef917df15d92a72420b58aff85f83e">

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+

src/flankBed/test.fa.fai

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<a href="#4412c928927809c2ef0ef3f16a8215a3f601c316">

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src/flankBed/test.gff

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<li class="file-stats">

<a href="#792b5f3184486afec28c7b1e66e0562d3c7bd4be">

src/genomeCoverageBed/genomeCoverageBed.cpp

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<a href="#eb284bdd86cd5f31acd04375cd3ab2f0ed9f013a">

src/genomeCoverageBed/genomeCoverageBed.h

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<li class="file-stats">

<a href="#d3f1db841ee576eded5e84abba576e340fc14a21">

src/reldist/reldist.cpp

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<li class="file-stats">

<a href="#eb5e5f752ec57124e6a5800ebebe82bfd320184a">

src/slopBed/slopBed.cpp

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<li class="file-stats">

<a href="#444559fc3f3d32dd76419cffea49eeb4812c133c">

src/utils/BamTools/include/BamAlignment.hpp

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<li class="file-stats">

<a href="#613b32f93251c1907a72ab4bc207c3e7773cd735">

src/utils/BamTools/include/SamHeader.hpp

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<li class="file-stats">

<a href="#f1a8a7320fdd5e9ec1a0cfe50befe1396cd7991c">

src/utils/Contexts/ContextBase.cpp

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<li class="file-stats">

<a href="#6f747447532d45e279936fe95b7fadc1234babfe">

src/utils/Contexts/ContextBase.h

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<li class="file-stats">

<a href="#cac4b8260944c776629ff93fafc582413e61b8a5">

src/utils/FileRecordTools/FileReaders/BufferedStreamMgr.cpp

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<li class="file-stats">

<a href="#2818defb269426338dbc7e48f00363b8466be8c8">

src/utils/FileRecordTools/FileReaders/BufferedStreamMgr.h

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<li class="file-stats">

<a href="#5f0a12d841e1a5251a253eca8c8afe4c56d7524b">

src/utils/FileRecordTools/Records/BlockMgr.cpp

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<li class="file-stats">

<a href="#0526f58cffcc04be1f251705eeba5f77da294708">

src/utils/FileRecordTools/Records/BlockMgr.h

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<li class="file-stats">

<a href="#ba35273f7701239ffb1e4e7b93000827dd054129">

src/utils/GenomeFile/NewGenomeFile.cpp

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<li class="file-stats">

<a href="#4d3c0ac5511d467074aab9cd0c303e361d0dd279">

src/utils/NewChromsweep/NewChromsweep.cpp

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<li class="file-stats">

<a href="#734b6a67a911d6d96c01870236b98e37864e0bcf">

src/utils/RecordOutputMgr/RecordOutputMgr.cpp

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<li class="file-stats">

<a href="#7e70fce08850280abb0bfcb92bca326645d92df3">

src/utils/version/version_release.txt

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<h5>The diff was not included because it is too large.</h5>

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