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<h3>
Sascha Steinbiss pushed to branch master
at <a href="https://salsa.debian.org/med-team/vmatch">Debian Med / vmatch</a>
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<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/vmatch/commit/351f8b51366f7d0bb22e20696bfe1bb88b0106fc">351f8b51</a></strong>
<div>
<span>by Sascha Steinbiss</span>
<i>at 2020-01-23T22:30:50+01:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">improve reproducibility
</pre>
</li>
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<h4>2 changed files:</h4>
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<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
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<li class="file-stats">
<a href="#87ba9cd7574dd1d01d72b7ceb5e99c2bc35089d1">
debian/patches/reproducible-build.patch
</a>
</li>
</ul>
<h4>Changes:</h4>
<li id="9c96da0e9f91d7d8937b69b524702c106258f0d1">
<a href="https://salsa.debian.org/med-team/vmatch/commit/351f8b51366f7d0bb22e20696bfe1bb88b0106fc#9c96da0e9f91d7d8937b69b524702c106258f0d1"><strong>debian/changelog</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">vmatch (2.3.1+dfsg-4) unstable; urgency=medium</span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext"> * Pass CFLAGS and friends to SELECT shared object building.</span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext"> -- Sascha Steinbiss <satta@debian.org> Thu, 23 Jan 2020 22:14:29 +0100</span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext">vmatch (2.3.1+dfsg-3) unstable; urgency=medium</span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext"> * Fix check for SOURCE_DATE_EPOCH.</span>
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<li id="87ba9cd7574dd1d01d72b7ceb5e99c2bc35089d1">
<a href="https://salsa.debian.org/med-team/vmatch/commit/351f8b51366f7d0bb22e20696bfe1bb88b0106fc#87ba9cd7574dd1d01d72b7ceb5e99c2bc35089d1"><strong>debian/patches/reproducible-build.patch</strong></a>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="29" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="29" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -29,3 +29,113 @@ Last-Update: 2020-01-20</td>
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<pre style="margin: 0;"> <span id="LC29" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#define ${PROGRAM}COMPILEHOST "${HOSTNAME}"</span></span>
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<pre style="margin: 0;"> <span id="LC30" class="line" lang="diff"> #endif</span>
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<pre style="margin: 0;"> <span id="LC31" class="line" lang="diff"> ENDOFRELEASEPOST</span>
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<pre style="margin: 0;">+<span id="LC32" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- a/src/Vmatch/SELECT/makefile</span></span>
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<pre style="margin: 0;">+<span id="LC33" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/src/Vmatch/SELECT/makefile</span></span>
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<td class="diff-line-num new new_line" data-linenumber="34" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC34" class="line" lang="diff"><span class="p">@@ -1,11 +1,11 @@</span></span>
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<pre style="margin: 0;">+<span id="LC35" class="line" lang="diff"> # makefile to compile shared objects using the gnu C compiler</span>
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<pre style="margin: 0;">+<span id="LC36" class="line" lang="diff"> # Stefan Kurtz, October 2000</span>
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<pre style="margin: 0;">+<span id="LC37" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC38" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-CC=gcc</span></span>
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<pre style="margin: 0;">+<span id="LC39" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+#CC=gcc</span></span>
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<pre style="margin: 0;">+<span id="LC40" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC41" class="line" lang="diff"> # in 64-bit mode add -m64</span>
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<pre style="margin: 0;">+<span id="LC42" class="line" lang="diff"> </span>
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43
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<pre style="margin: 0;">+<span id="LC43" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-CFLAGS=-Wall -Werror -O3 -g</span></span>
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44
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<pre style="margin: 0;">+<span id="LC44" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+CFLAGS+=-Wall -Werror -O3 -g</span></span>
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<pre style="margin: 0;">+<span id="LC45" class="line" lang="diff"> </span>
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46
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<pre style="margin: 0;">+<span id="LC46" class="line" lang="diff"> ifneq ($(SYSTEM),Windows)</span>
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47
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<pre style="margin: 0;">+<span id="LC47" class="line" lang="diff"> CFLAGS+=-fPIC</span>
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<pre style="margin: 0;">+<span id="LC48" class="line" lang="diff"><span class="p">@@ -43,15 +43,15 @@</span></span>
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<pre style="margin: 0;">+<span id="LC49" class="line" lang="diff"> # on most platforms the shared objects have a suffix .so</span>
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<pre style="margin: 0;">+<span id="LC50" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC51" class="line" lang="diff"> %.so:%.c Shareddef</span>
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<pre style="margin: 0;">+<span id="LC52" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- ${CC} ${CFLAGS} ${CPPFLAGS} ${SHARED} $< -o $@</span></span>
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<pre style="margin: 0;">+<span id="LC53" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ ${CC} ${CFLAGS} ${CPPFLAGS} ${SHARED} $< -o $@ ${LDFLAGS}</span></span>
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<pre style="margin: 0;">+<span id="LC54" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC55" class="line" lang="diff"> mergematches-dbg.so:mergematches.c Shareddef</span>
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<pre style="margin: 0;">+<span id="LC56" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- ${CC} ${CFLAGS} ${CPPFLAGS} -DDEBUG ${SHARED} $< -o $@</span></span>
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<pre style="margin: 0;">+<span id="LC57" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ ${CC} ${CFLAGS} ${CPPFLAGS} -DDEBUG ${SHARED} $< -o $@ ${LDFLAGS}</span></span>
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<pre style="margin: 0;">+<span id="LC58" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC59" class="line" lang="diff"> # on HP-UX the shared objects have a suffix .sl</span>
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<pre style="margin: 0;">+<span id="LC60" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC61" class="line" lang="diff"> %.sl:%.c Shareddef</span>
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<pre style="margin: 0;">+<span id="LC62" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- @${CC} ${CFLAGS} ${CPPFLAGS} ${SHARED} $< -o $@</span></span>
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<pre style="margin: 0;">+<span id="LC63" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ @${CC} ${CFLAGS} ${CPPFLAGS} ${SHARED} $< -o $@ ${LDFLAGS}</span></span>
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<pre style="margin: 0;">+<span id="LC64" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC65" class="line" lang="diff"> # the following goal generates the output of the C-preprocessor</span>
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<pre style="margin: 0;">+<span id="LC66" class="line" lang="diff"> # applied to the given C-file.</span>
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<pre style="margin: 0;">+<span id="LC67" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- a/src/Vmatch/SELECT/mstat.c</span></span>
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68
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<pre style="margin: 0;">+<span id="LC68" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/src/Vmatch/SELECT/mstat.c</span></span>
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<pre style="margin: 0;">+<span id="LC69" class="line" lang="diff"><span class="p">@@ -87,20 +87,20 @@</span></span>
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<pre style="margin: 0;">+<span id="LC70" class="line" lang="diff"> and \(iend\). The following function reports such section.</span>
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<pre style="margin: 0;">+<span id="LC71" class="line" lang="diff"> */</span>
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72
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<pre style="margin: 0;">+<span id="LC72" class="line" lang="diff"> </span>
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73
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<pre style="margin: 0;">+<span id="LC73" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-static void showsection(ArrayMstatvalue *mstat,Uint istart,Uint iend)</span></span>
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74
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<pre style="margin: 0;">+<span id="LC74" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+static void showsection(ArrayMstatvalue *mmstat,Uint istart,Uint iend)</span></span>
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75
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<pre style="margin: 0;">+<span id="LC75" class="line" lang="diff"> {</span>
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76
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<pre style="margin: 0;">+<span id="LC76" class="line" lang="diff"> Uint i;</span>
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77
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<pre style="margin: 0;">+<span id="LC77" class="line" lang="diff"> Mstatvalue *mstatptr;</span>
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78
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<pre style="margin: 0;">+<span id="LC78" class="line" lang="diff"> </span>
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79
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<pre style="margin: 0;">+<span id="LC79" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- printf("%lu:\n",(Showuint) mstat->spaceMstatvalue[istart].seqnum1);</span></span>
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80
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<pre style="margin: 0;">+<span id="LC80" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ printf("%lu:\n",(Showuint) mmstat->spaceMstatvalue[istart].seqnum1);</span></span>
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81
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<pre style="margin: 0;">+<span id="LC81" class="line" lang="diff"> for(i=istart; i<=iend; i++)</span>
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82
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<pre style="margin: 0;">+<span id="LC82" class="line" lang="diff"> {</span>
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83
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<pre style="margin: 0;">+<span id="LC83" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- mstatptr = mstat->spaceMstatvalue + i;</span></span>
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84
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<pre style="margin: 0;">+<span id="LC84" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- if(mstatptr->seqnum1 != mstat->spaceMstatvalue[istart].seqnum1)</span></span>
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85
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<pre style="margin: 0;">+<span id="LC85" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ mstatptr = mmstat->spaceMstatvalue + i;</span></span>
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86
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<pre style="margin: 0;">+<span id="LC86" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ if(mstatptr->seqnum1 != mmstat->spaceMstatvalue[istart].seqnum1)</span></span>
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87
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<pre style="margin: 0;">+<span id="LC87" class="line" lang="diff"> {</span>
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88
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<pre style="margin: 0;">+<span id="LC88" class="line" lang="diff"> fprintf(stderr,"seqnum1 =%lu != %lu\n",</span>
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89
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<pre style="margin: 0;">+<span id="LC89" class="line" lang="diff"> (Showuint) mstatptr->seqnum1,</span>
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90
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<pre style="margin: 0;">+<span id="LC90" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- (Showuint) mstat->spaceMstatvalue[istart].seqnum1);</span></span>
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91
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<pre style="margin: 0;">+<span id="LC91" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ (Showuint) mmstat->spaceMstatvalue[istart].seqnum1);</span></span>
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92
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<pre style="margin: 0;">+<span id="LC92" class="line" lang="diff"> exit(EXIT_FAILURE);</span>
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93
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<pre style="margin: 0;">+<span id="LC93" class="line" lang="diff"> }</span>
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94
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<pre style="margin: 0;">+<span id="LC94" class="line" lang="diff"> printf(" %lu %lu %lu %lu\n",</span>
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95
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<pre style="margin: 0;">+<span id="LC95" class="line" lang="diff"><span class="p">@@ -117,27 +117,27 @@</span></span>
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96
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<pre style="margin: 0;">+<span id="LC96" class="line" lang="diff"> function \texttt{showsection} is applied.</span>
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97
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<pre style="margin: 0;">+<span id="LC97" class="line" lang="diff"> */</span>
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98
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<pre style="margin: 0;">+<span id="LC98" class="line" lang="diff"> </span>
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99
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<pre style="margin: 0;">+<span id="LC99" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-static void splitMstatvalues(ArrayMstatvalue *mstat)</span></span>
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100
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<pre style="margin: 0;">+<span id="LC100" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+static void splitMstatvalues(ArrayMstatvalue *mmstat)</span></span>
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101
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<pre style="margin: 0;">+<span id="LC101" class="line" lang="diff"> {</span>
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102
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<pre style="margin: 0;">+<span id="LC102" class="line" lang="diff"> Uint i, lastseqnum, istart;</span>
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103
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<pre style="margin: 0;">+<span id="LC103" class="line" lang="diff"> </span>
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104
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<pre style="margin: 0;">+<span id="LC104" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- if(mstat->nextfreeMstatvalue == 0)</span></span>
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105
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<pre style="margin: 0;">+<span id="LC105" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ if(mmstat->nextfreeMstatvalue == 0)</span></span>
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106
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<pre style="margin: 0;">+<span id="LC106" class="line" lang="diff"> {</span>
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107
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<pre style="margin: 0;">+<span id="LC107" class="line" lang="diff"> fprintf(stderr,"no matches available\n");</span>
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108
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<pre style="margin: 0;">+<span id="LC108" class="line" lang="diff"> exit(EXIT_FAILURE);</span>
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109
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<pre style="margin: 0;">+<span id="LC109" class="line" lang="diff"> }</span>
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110
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<pre style="margin: 0;">+<span id="LC110" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- lastseqnum = mstat->spaceMstatvalue[0].seqnum1;</span></span>
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111
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<pre style="margin: 0;">+<span id="LC111" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ lastseqnum = mmstat->spaceMstatvalue[0].seqnum1;</span></span>
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112
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<pre style="margin: 0;">+<span id="LC112" class="line" lang="diff"> istart = 0;</span>
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113
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<pre style="margin: 0;">+<span id="LC113" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- for(i=1; i<mstat->nextfreeMstatvalue; i++)</span></span>
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114
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<pre style="margin: 0;">+<span id="LC114" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ for(i=1; i<mmstat->nextfreeMstatvalue; i++)</span></span>
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115
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<pre style="margin: 0;">+<span id="LC115" class="line" lang="diff"> {</span>
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116
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<pre style="margin: 0;">+<span id="LC116" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- if(lastseqnum < mstat->spaceMstatvalue[i].seqnum1)</span></span>
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117
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<pre style="margin: 0;">+<span id="LC117" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ if(lastseqnum < mmstat->spaceMstatvalue[i].seqnum1)</span></span>
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118
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<pre style="margin: 0;">+<span id="LC118" class="line" lang="diff"> {</span>
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119
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<pre style="margin: 0;">+<span id="LC119" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- showsection(mstat,istart,i-1);</span></span>
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120
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<pre style="margin: 0;">+<span id="LC120" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- lastseqnum = mstat->spaceMstatvalue[i].seqnum1;</span></span>
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121
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<pre style="margin: 0;">+<span id="LC121" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ showsection(mmstat,istart,i-1);</span></span>
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122
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<pre style="margin: 0;">+<span id="LC122" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ lastseqnum = mmstat->spaceMstatvalue[i].seqnum1;</span></span>
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123
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<pre style="margin: 0;">+<span id="LC123" class="line" lang="diff"> istart = i;</span>
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124
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<pre style="margin: 0;">+<span id="LC124" class="line" lang="diff"> }</span>
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125
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<pre style="margin: 0;">+<span id="LC125" class="line" lang="diff"> }</span>
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126
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<pre style="margin: 0;">+<span id="LC126" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- showsection(mstat,istart,i-1);</span></span>
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127
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<pre style="margin: 0;">+<span id="LC127" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ showsection(mmstat,istart,i-1);</span></span>
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128
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<pre style="margin: 0;">+<span id="LC128" class="line" lang="diff"> }</span>
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129
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<pre style="margin: 0;">+<span id="LC129" class="line" lang="diff"> </span>
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130
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<pre style="margin: 0;">+<span id="LC130" class="line" lang="diff"> /*</span>
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131
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<pre style="margin: 0;">+<span id="LC131" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- a/src/Vmatch/SELECT/cgvizout.c</span></span>
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132
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<pre style="margin: 0;">+<span id="LC132" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ b/src/Vmatch/SELECT/cgvizout.c</span></span>
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133
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<pre style="margin: 0;">+<span id="LC133" class="line" lang="diff"><span class="p">@@ -99,7 +99,7 @@</span></span>
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134
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<pre style="margin: 0;">+<span id="LC134" class="line" lang="diff"> static ArrayConnectdata *edges;</span>
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135
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<pre style="margin: 0;">+<span id="LC135" class="line" lang="diff"> </span>
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136
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<pre style="margin: 0;">+<span id="LC136" class="line" lang="diff"> /*Sorting and grouping of matches. Returns number of generated groups*/</span>
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137
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<pre style="margin: 0;">+<span id="LC137" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">-static Uint multmatchesCountingSort ()</span></span>
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138
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<pre style="margin: 0;">+<span id="LC138" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+static Uint multmatchesCountingSort (void)</span></span>
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139
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<pre style="margin: 0;">+<span id="LC139" class="line" lang="diff"> {</span>
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140
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<pre style="margin: 0;">+<span id="LC140" class="line" lang="diff"> Uint maxmatchlen = 0,</span>
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141
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<pre style="margin: 0;">+<span id="LC141" class="line" lang="diff"> nof_matches,</span></pre>
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