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<h3>
Michael R. Crusoe pushed to branch master
at <a href="https://salsa.debian.org/med-team/python-skbio">Debian Med / python-skbio</a>
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<h4>
Commits:
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<strong><a href="https://salsa.debian.org/med-team/python-skbio/-/commit/7e93670b9724e72b793d74044887069f29671dd0">7e93670b</a></strong>
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<span>by Michael R. Crusoe</span>
<i>at 2020-02-28T15:19:51+01:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Soften the equality test in NjTests.test_nj_dm1
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<h4>3 changed files:</h4>
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<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
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<a href="#bc34014ab4b9a49dd7a27bdd8d352912607c3a96">
debian/patches/series
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+
debian/patches/soften_test
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<h4>Changes:</h4>
<li id="9c96da0e9f91d7d8937b69b524702c106258f0d1">
<a href="https://salsa.debian.org/med-team/python-skbio/-/commit/7e93670b9724e72b793d74044887069f29671dd0#9c96da0e9f91d7d8937b69b524702c106258f0d1"><strong>debian/changelog</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">python-skbio (0.5.5-7) unstable; urgency=medium</span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext"> * Team upload.</span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext"> * Soften the equality test in NjTests.test_nj_dm1</span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext"></span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"> -- Michael R. Crusoe <michael.crusoe@gmail.com> Fri, 28 Feb 2020 15:18:57 +0100</span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext">python-skbio (0.5.5-6) unstable; urgency=medium</span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext"> * Team upload.</span>
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<li id="bc34014ab4b9a49dd7a27bdd8d352912607c3a96">
<a href="https://salsa.debian.org/med-team/python-skbio/-/commit/7e93670b9724e72b793d74044887069f29671dd0#bc34014ab4b9a49dd7a27bdd8d352912607c3a96"><strong>debian/patches/series</strong></a>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="6" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -6,3 +6,4 @@ no_privacy_breach_logo.patch</td>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext">ignore_failing_patches.patch</span>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext">simde</span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext">pandas_1_0_1</span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext">soften_test</span></pre>
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<a href="https://salsa.debian.org/med-team/python-skbio/-/commit/7e93670b9724e72b793d74044887069f29671dd0#a14ad1d123d1f66610c61d9334c9d6e6acf57d7d"><strong>debian/patches/soften_test</strong></a>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="diff"><span class="p">Author: Michael R. Crusoe <michael.crusoe@gmail.com></span></span>
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<pre style="margin: 0;">+<span id="LC2" class="line" lang="diff"><span class="p">Description: 2.220446049250313e-16 is basically zero</span></span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">--- python-skbio.orig/skbio/tree/tests/test_nj.py</span></span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+++ python-skbio/skbio/tree/tests/test_nj.py</span></span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="diff"><span class="p">@@ -80,7 +80,7 @@</span></span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="diff"> self.expected1_str)</span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="diff"> # what is the correct way to compare TreeNode objects for equality?</span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="diff"> actual_TreeNode = nj(self.dm1)</span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="diff"><span class="gd" style="color: #000; background-color: #fdd;">- self.assertEqual(actual_TreeNode.compare_tip_distances(</span></span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="diff"><span class="gi" style="color: #000; background-color: #dfd;">+ self.assertAlmostEqual(actual_TreeNode.compare_tip_distances(</span></span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="diff"> self.expected1_TreeNode), 0.0)</span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="diff"> </span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="diff"> def test_nj_dm2(self):</span></pre>
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