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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/community/helper-scripts">Debian Med / community / helper-scripts</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/0ce69abf272112f4939982231fdbb726fe9affff">0ce69abf</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-03-12T01:44:42+00:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">automatic update
</pre>
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<h4>2 changed files:</h4>
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<li class="file-stats">
<a href="#f6d55d24085decec06151dd27f30199089d856ca">
debian-med-tests.txt
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<li class="file-stats">
<a href="#2654e31016bcee9bbe05d462121706cc8ed368af">
outdated_med-packages.txt
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</li>
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<h4>Changes:</h4>
<li id="f6d55d24085decec06151dd27f30199089d856ca">
<a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/0ce69abf272112f4939982231fdbb726fe9affff#f6d55d24085decec06151dd27f30199089d856ca"><strong>debian-med-tests.txt</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">Last-Update: <span class="idiff left right">Wed, 11 Mar 2020 13</span>:42:03 +0000</span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">Last-Update: <span class="idiff left right">Thu, 12 Mar 2020 01</span>:42:03 +0000</span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext"> Source | Vote | Tasks | Tags </span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext">-------------------------------+--------+--------------------------------------------+----------------------------------------------------------------------</span>
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<a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/0ce69abf272112f4939982231fdbb726fe9affff#2654e31016bcee9bbe05d462121706cc8ed368af"><strong>outdated_med-packages.txt</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">Last-Update: <span class="idiff left right">Wed, 11 Mar 2020 13</span>:42:03 +0000</span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">Last-Update: <span class="idiff left right">Thu, 12 Mar 2020 01</span>:42:03 +0000</span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext"> source | version | upstream_version | uploaders | Last uploader | Last uploaded </span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext">-------------------------------+---------------------------------+---------------------------------+-----------------------------------------------------------------------------+----------------------+------------------------</span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="112" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="112" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -112,6 +112,7 @@ Last-Update: Wed, 11 Mar 2020 13:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC112" class="line" lang="plaintext"> ariba | 951944 | serious | ariba: FTBFS: dh_auto_test: error: pybuild --test --test-nose -i python{version} -p 3.7 returned exit code 13</span>
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<td class="diff-line-num old_line" data-linenumber="113" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC113" class="line" lang="plaintext"> bamtools | 865130 | important | reapr FTBFS on big endian: Error sampling from files '00.Sample/fragCov.gz', '00.assembly.fa.gc.gz'</span>
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<pre style="margin: 0;"> <span id="LC114" class="line" lang="plaintext"> bcbio | 928076 | important | bcbio: Workflows not ready for non-developers to depend on.</span>
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<pre style="margin: 0;">+<span id="LC115" class="line" lang="plaintext"> bcbio | 953642 | serious | bcbio: build-depends on removed tophat</span>
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<pre style="margin: 0;"> <span id="LC116" class="line" lang="plaintext"> bcftools | 819617 | important | FTBFS: any-i386 - floating point idiosyncracies</span>
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<pre style="margin: 0;"> <span id="LC117" class="line" lang="plaintext"> bcftools | 860682 | important | bcftools: FTBFS on i386: Test failures</span>
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<pre style="margin: 0;"> <span id="LC118" class="line" lang="plaintext"> bcftools | 860704 | important | python-pysam: FTBFS on i386: build-dependency not installable: bcftools (>= 1.3.1)</span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="197" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="198" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -197,7 +198,6 @@ Last-Update: Wed, 11 Mar 2020 13:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC198" class="line" lang="plaintext"> libmaus2 | 934619 | serious | libmaus2 FTBFS (mostly 32bit): error: no matching function for call</span>
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<td class="diff-line-num old_line" data-linenumber="198" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="diff-line-num new_line" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC199" class="line" lang="plaintext"> librostlab-blast | 832138 | wishlist | librostlab-blast: The package should compile without forcing the older -std=c++03</span>
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<td class="diff-line-num old_line" data-linenumber="199" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC200" class="line" lang="plaintext"> librostlab-blast | 851472 | normal | librostlab-blast: autopkg test suite failure</span>
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<pre style="margin: 0;">-<span id="LC200" class="line" lang="plaintext"> libsbml | 953584 | serious | libsbml: FTBFS on mipsel</span>
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<pre style="margin: 0;"> <span id="LC201" class="line" lang="plaintext"> libsis-base-java | 929530 | important | libsis-base-java: unaligned access on armhf</span>
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<pre style="margin: 0;"> <span id="LC202" class="line" lang="plaintext"> libsis-jhdf5-java | 842815 | serious | libsis-jhdf5-java: FTBFS: java.lang.NoClassDefFoundError: Could not initialize class ch.systemsx.cisd.hdf5.CharacterEncoding</span>
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<pre style="margin: 0;"> <span id="LC203" class="line" lang="plaintext"> libsis-jhdf5-java | 846735 | serious | libsis-jhdf5-java: FTBFS: java.lang.NoClassDefFoundError: Could not initialize class ch.systemsx.cisd.hdf5.CharacterEncoding</span>
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