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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/community/helper-scripts">Debian Med / community / helper-scripts</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/e23315dd009a10a99bc6a16617d8493678dc51f9">e23315dd</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-03-16T13:49:54+00:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">automatic update
</pre>
</li>
</ul>
<h4>2 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#f6d55d24085decec06151dd27f30199089d856ca">
debian-med-tests.txt
</a>
</li>
<li class="file-stats">
<a href="#2654e31016bcee9bbe05d462121706cc8ed368af">
outdated_med-packages.txt
</a>
</li>
</ul>
<h4>Changes:</h4>
<li id="f6d55d24085decec06151dd27f30199089d856ca">
<a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/e23315dd009a10a99bc6a16617d8493678dc51f9#f6d55d24085decec06151dd27f30199089d856ca"><strong>debian-med-tests.txt</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">Last-Update: Mon, 16 Mar 2020 <span class="idiff left right">01:42:04</span> +0000</span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">Last-Update: Mon, 16 Mar 2020 <span class="idiff left right">13:42:03</span> +0000</span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext"> Source                        | Vote   | Tasks                                      |                                 Tags                                 </span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext">-------------------------------+--------+--------------------------------------------+----------------------------------------------------------------------</span>
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="plaintext"> dcmtk                         |    179 | {imaging}                                  | </span>
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="plaintext"> orthanc                       |    102 | {practice,imaging}                         | </span>
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<pre style="margin: 0;">-<span id="LC7" class="line" lang="plaintext"> gdcm                          |     47 | {imaging-dev}                              | </span>
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<pre style="margin: 0;">-<span id="LC8" class="line" lang="plaintext"> dcm2niix                      |     43 | {imaging}                                  | </span>
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<pre style="margin: 0;">-<span id="LC9" class="line" lang="plaintext"> orthanc-wsi                   |     39 | {oncology,laboratory,imaging,his,practice} | </span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext"> dcmtk                         |    182 | {imaging}                                  | </span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"> orthanc                       |    104 | {practice,imaging}                         | </span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"> gdcm                          |     46 | {imaging-dev}                              | </span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext"> orthanc-wsi                   |     41 | {oncology,laboratory,imaging,his,practice} | </span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext"> amide                         |     36 | {imaging}                                  | </span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext"> dicomscope                    |     33 | {imaging}                                  | </span>
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<pre style="margin: 0;">-<span id="LC12" class="line" lang="plaintext"> htsjdk                        |     32 | {bio-dev}                                  | </span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="plaintext"> htsjdk                        |     33 | {bio-dev}                                  | </span>
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="plaintext"> dcm2niix                      |     32 | {imaging}                                  | </span>
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13
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13
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="plaintext"> dicom3tools                   |     29 | {imaging}                                  | </span>
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<td class="diff-line-num old old_line" data-linenumber="14" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
14
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<td class="diff-line-num new_line old" data-linenumber="14" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
 
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<pre style="margin: 0;">-<span id="LC14" class="line" lang="plaintext"> gdcm                          |     <span class="idiff left right">20</span> | {imaging}                                  | </span>
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<td class="diff-line-num old old_line" data-linenumber="15" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
15
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<td class="diff-line-num new_line old" data-linenumber="14" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
 
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<pre style="margin: 0;">-<span id="LC15" class="line" lang="plaintext"> gnumed-server                 |     1<span class="idiff left right">8</span> | {practice}                                 | </span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="16" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
 
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<td class="diff-line-num new new_line" data-linenumber="14" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
14
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="plaintext"> gdcm                          |     <span class="idiff left right">19</span> | {imaging}                                  | </span>
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<td class="diff-line-num new old_line" data-linenumber="16" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
 
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<td class="diff-line-num new new_line" data-linenumber="15" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
15
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="plaintext"> gnumed-server                 |     1<span class="idiff left right">9</span> | {practice}                                 | </span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="16" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
16
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<td class="diff-line-num new_line" data-linenumber="16" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
16
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<pre style="margin: 0;"> <span id="LC16" class="line" lang="plaintext"> pixelmed                      |     18 | {imaging}                                  | </span>
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<td class="diff-line-num old_line" data-linenumber="17" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
17
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17
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<pre style="margin: 0;"> <span id="LC17" class="line" lang="plaintext"> king                          |     17 | {imaging,typesetting}                      | </span>
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<td class="diff-line-num new_line old" data-linenumber="18" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
 
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<pre style="margin: 0;">-<span id="LC18" class="line" lang="plaintext"> <span class="idiff left right">invesalius                    |     16 | {imaging</span>}                                  | </span>
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<td class="diff-line-num new old_line" data-linenumber="19" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
 
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<td class="diff-line-num new new_line" data-linenumber="18" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="plaintext"> <span class="idiff left right">ngs-sdk                       |     17 | {bio-dev</span>}                                  | </span>
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<pre style="margin: 0;"> <span id="LC19" class="line" lang="plaintext"> minc-tools                    |     16 | {imaging}                                  | </span>
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<pre style="margin: 0;">-<span id="LC20" class="line" lang="plaintext"> ngs-sdk                       |     16 | {bio-dev}                                  | </span>
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<pre style="margin: 0;">-<span id="LC21" class="line" lang="plaintext"> insighttoolkit4               |     15 | {imaging-dev}                              | </span>
</pre>
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="plaintext"> invesalius                    |     15 | {imaging}                                  | </span>
</pre>
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<pre style="margin: 0;"> <span id="LC21" class="line" lang="plaintext"> openslide                     |     15 | {imaging}                                  | </span>
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<td class="diff-line-num new old_line" data-linenumber="23" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
 
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<pre style="margin: 0;">+<span id="LC22" class="line" lang="plaintext"> insighttoolkit4               |     14 | {imaging-dev}                              | </span>
</pre>
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<pre style="margin: 0;"> <span id="LC23" class="line" lang="plaintext"> adun.app                      |     13 | {bio}                                      | </span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="24" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="diff-line-num new_line" data-linenumber="24" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC24" class="line" lang="plaintext"> biojava-live                  |     13 | {bio-dev}                                  | </span>
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<td class="diff-line-num new_line old" data-linenumber="25" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
 
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<pre style="margin: 0;">-<span id="LC25" class="line" lang="plaintext"> plastimatch                   |     13 | {imaging}                                  | </span>
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<td class="diff-line-num new new_line" data-linenumber="25" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
25
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<pre style="margin: 0;">+<span id="LC25" class="line" lang="plaintext"> vtk-dicom                     |     13 | {imaging}                                  | </span>
</pre>
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<td class="diff-line-num new old_line" data-linenumber="26" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
 
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<td class="diff-line-num new new_line" data-linenumber="26" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC26" class="line" lang="plaintext"> plastimatch                   |     12 | {imaging}                                  | </span>
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<pre style="margin: 0;"> <span id="LC27" class="line" lang="plaintext"> psychopy                      |     12 | {psychology}                               | </span>
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<pre style="margin: 0;">-<span id="LC27" class="line" lang="plaintext"> vtk-dicom                     |     12 | {imaging}                                  | </span>
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<pre style="margin: 0;"> <span id="LC28" class="line" lang="plaintext"> jebl2                         |     11 | {bio-dev}                                  | </span>
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<pre style="margin: 0;"> <span id="LC29" class="line" lang="plaintext"> mia                           |     11 | {imaging}                                  | </span>
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<pre style="margin: 0;"> <span id="LC30" class="line" lang="plaintext"> tree-puzzle                   |     11 | {bio,bio-phylogeny,cloud}                  | </span>
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<pre style="margin: 0;"> <span id="LC32" class="line" lang="plaintext"> librg-utils-perl              |     10 | {bio}                                      | </span>
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<pre style="margin: 0;"> <span id="LC33" class="line" lang="plaintext"> ncbi-entrez-direct            |     10 | {bio}                                      | </span>
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<pre style="margin: 0;"> <span id="LC34" class="line" lang="plaintext"> fastlink                      |      9 | {cloud,bio}                                | </span>
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<pre style="margin: 0;">-<span id="LC35" class="line" lang="plaintext"> gdcm                          |      9 | {imaging-dev}                              | </span>
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<pre style="margin: 0;"> <span id="LC35" class="line" lang="plaintext"> melting                       |      9 | {bio,cloud}                                | </span>
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<pre style="margin: 0;"> <span id="LC36" class="line" lang="plaintext"> ncbi-seg                      |      9 | {bio}                                      | </span>
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<pre style="margin: 0;"> <span id="LC37" class="line" lang="plaintext"> norsp                         |      9 | {bio}                                      | </span>
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<pre style="margin: 0;"> <span id="LC39" class="line" lang="plaintext"> staden                        |      9 | {bio}                                      | </span>
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<pre style="margin: 0;"> <span id="LC40" class="line" lang="plaintext"> arden                         |      8 | {cloud,bio}                                | </span>
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<pre style="margin: 0;"> <span id="LC41" class="line" lang="plaintext"> diamond-aligner               |      8 | {bio}                                      | </span>
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<pre style="margin: 0;">+<span id="LC42" class="line" lang="plaintext"> gdcm                          |      8 | {imaging-dev}                              | </span>
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<pre style="margin: 0;"> <span id="LC43" class="line" lang="plaintext"> maqview                       |      8 | {bio}                                      | </span>
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<pre style="margin: 0;"> <span id="LC44" class="line" lang="plaintext"> mauve-aligner                 |      8 | {bio}                                      | </span>
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<pre style="margin: 0;"> <span id="LC45" class="line" lang="plaintext"> mipe                          |      8 | {bio,cloud}                                | </span>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="74" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<pre style="margin: 0;"> <span id="LC74" class="line" lang="plaintext"> king-probe                    |      6 | {bio}                                      | </span>
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<pre style="margin: 0;"> <span id="LC75" class="line" lang="plaintext"> libdivsufsort                 |      6 | {bio-dev}                                  | </span>
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<pre style="margin: 0;"> <span id="LC76" class="line" lang="plaintext"> libsbml                       |      6 | {bio-dev}                                  | </span>
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<pre style="margin: 0;">+<span id="LC77" class="line" lang="plaintext"> orthanc-webviewer             |      6 | {imaging}                                  | </span>
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<pre style="margin: 0;"> <span id="LC78" class="line" lang="plaintext"> paraclu                       |      6 | {cloud,bio}                                | </span>
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<pre style="margin: 0;"> <span id="LC79" class="line" lang="plaintext"> perm                          |      6 | {cloud,bio}                                | </span>
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<pre style="margin: 0;"> <span id="LC80" class="line" lang="plaintext"> poretools                     |      6 | {bio}                                      | </span>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="96" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<pre style="margin: 0;"> <span id="LC96" class="line" lang="plaintext"> elastix                       |      5 | {imaging}                                  | </span>
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<pre style="margin: 0;"> <span id="LC97" class="line" lang="plaintext"> estscan                       |      5 | {bio}                                      | </span>
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<pre style="margin: 0;"> <span id="LC98" class="line" lang="plaintext"> fitgcp                        |      5 | {bio,cloud}                                | </span>
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<pre style="margin: 0;">+<span id="LC99" class="line" lang="plaintext"> freebayes                     |      5 | {bio}                                      | </span>
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<pre style="margin: 0;"> <span id="LC100" class="line" lang="plaintext"> harvest-tools                 |      5 | {bio}                                      | </span>
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<pre style="margin: 0;"> <span id="LC101" class="line" lang="plaintext"> indelible                     |      5 | {bio}                                      | </span>
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<pre style="margin: 0;"> <span id="LC102" class="line" lang="plaintext"> ipig                          |      5 | {bio}                                      | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="107" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="109" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -107,7 +109,6 @@ Last-Update: Mon, 16 Mar 2020 01:42:04 +0000</td>
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<pre style="margin: 0;"> <span id="LC109" class="line" lang="plaintext"> microbegps                    |      5 | {bio}                                      | </span>
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<pre style="margin: 0;"> <span id="LC110" class="line" lang="plaintext"> mlv-smile                     |      5 | {cloud,bio}                                | </span>
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<pre style="margin: 0;"> <span id="LC111" class="line" lang="plaintext"> murasaki                      |      5 | {bio}                                      | </span>
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<pre style="margin: 0;">-<span id="LC110" class="line" lang="plaintext"> orthanc-webviewer             |      5 | {imaging}                                  | </span>
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<pre style="margin: 0;"> <span id="LC112" class="line" lang="plaintext"> phast                         |      5 | {bio}                                      | </span>
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<td class="diff-line-num new_line" data-linenumber="113" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC113" class="line" lang="plaintext"> placnet                       |      5 | {bio}                                      | </span>
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<pre style="margin: 0;"> <span id="LC114" class="line" lang="plaintext"> proalign                      |      5 | {bio-phylogeny,bio}                        | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="129" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="130" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<pre style="margin: 0;"> <span id="LC130" class="line" lang="plaintext"> cluster3                      |      4 | {bio}                                      | </span>
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<pre style="margin: 0;"> <span id="LC131" class="line" lang="plaintext"> dascrubber                    |      4 | {bio}                                      | </span>
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<pre style="margin: 0;"> <span id="LC132" class="line" lang="plaintext"> elph                          |      4 | {bio}                                      | </span>
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<pre style="margin: 0;">-<span id="LC132" class="line" lang="plaintext"> freebayes                     |      4 | {bio}                                      | </span>
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<pre style="margin: 0;"> <span id="LC133" class="line" lang="plaintext"> lamarc                        |      4 | {bio}                                      | </span>
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<pre style="margin: 0;"> <span id="LC134" class="line" lang="plaintext"> libpal-java                   |      4 | {bio-dev}                                  | </span>
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<pre style="margin: 0;"> <span id="LC135" class="line" lang="plaintext"> librdp-taxonomy-tree-java     |      4 | {bio-dev}                                  | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="181" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="181" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<pre style="margin: 0;"> <span id="LC181" class="line" lang="plaintext"> pilon                         |      3 | {bio}                                      | </span>
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<pre style="margin: 0;"> <span id="LC182" class="line" lang="plaintext"> prottest                      |      3 | {bio-phylogeny,bio}                        | </span>
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<pre style="margin: 0;"> <span id="LC183" class="line" lang="plaintext"> qcumber                       |      3 | {bio}                                      | </span>
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<pre style="margin: 0;">+<span id="LC184" class="line" lang="plaintext"> qrisk2                        |      3 | {practice}                                 | </span>
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<pre style="margin: 0;"> <span id="LC185" class="line" lang="plaintext"> rampler                       |      3 | {bio}                                      | </span>
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<pre style="margin: 0;"> <span id="LC186" class="line" lang="plaintext"> rdp-alignment                 |      3 | {bio}                                      | </span>
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<pre style="margin: 0;"> <span id="LC187" class="line" lang="plaintext"> roguenarok                    |      3 | {bio}                                      | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="205" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="206" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<pre style="margin: 0;"> <span id="LC206" class="line" lang="plaintext"> metaphlan2                    |      2 | {bio}                                      | </span>
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<pre style="margin: 0;"> <span id="LC207" class="line" lang="plaintext"> opencfu                       |      2 | {laboratory}                               | </span>
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<pre style="margin: 0;"> <span id="LC208" class="line" lang="plaintext"> pal2nal                       |      2 | {bio}                                      | </span>
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<pre style="margin: 0;">-<span id="LC208" class="line" lang="plaintext"> qrisk2                        |      2 | {practice}                                 | </span>
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<pre style="margin: 0;"> <span id="LC209" class="line" lang="plaintext"> relion                        |      2 | {bio}                                      | </span>
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<pre style="margin: 0;"> <span id="LC210" class="line" lang="plaintext"> scrm                          |      2 | {bio}                                      | </span>
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<pre style="margin: 0;"> <span id="LC211" class="line" lang="plaintext"> seqmagick                     |      2 | {bio}                                      | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="233" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="233" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<pre style="margin: 0;"> <span id="LC233" class="line" lang="plaintext"> libvistaio                    |      1 | {imaging-dev}                              | </span>
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<pre style="margin: 0;"> <span id="LC234" class="line" lang="plaintext"> maxflow                       |      1 | {imaging-dev}                              | </span>
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<pre style="margin: 0;"> <span id="LC235" class="line" lang="plaintext"> mencal                        |      1 | {tools}                                    | </span>
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<pre style="margin: 0;">+<span id="LC236" class="line" lang="plaintext"> ngs-sdk                       |      1 | {bio-dev}                                  | </span>
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<pre style="margin: 0;"> <span id="LC237" class="line" lang="plaintext"> nutsqlite                     |      1 | {tools}                                    | </span>
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<pre style="margin: 0;"> <span id="LC238" class="line" lang="plaintext"> opensurgsim                   |      1 | {imaging-dev}                              | </span>
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<pre style="margin: 0;"> <span id="LC239" class="line" lang="plaintext"> orthanc-mysql                 |      1 | {imaging}                                  | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="293" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="294" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<pre style="margin: 0;"> <span id="LC294" class="line" lang="plaintext"> mssstest                      |      0 | {tools}                                    | </span>
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<pre style="margin: 0;"> <span id="LC295" class="line" lang="plaintext"> murasaki                      |      0 | {bio}                                      | </span>
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<pre style="margin: 0;"> <span id="LC296" class="line" lang="plaintext"> ncbi-vdb                      |      0 | {bio-dev}                                  | </span>
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<pre style="margin: 0;">-<span id="LC296" class="line" lang="plaintext"> ngs-sdk                       |      0 | {bio-dev}                                  | </span>
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<pre style="margin: 0;"> <span id="LC297" class="line" lang="plaintext"> orthanc-imagej                |      0 | {imaging}                                  | </span>
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<pre style="margin: 0;"> <span id="LC298" class="line" lang="plaintext"> oscar                         |      0 | {tools,data,practice}                      | </span>
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<pre style="margin: 0;"> <span id="LC299" class="line" lang="plaintext"> pbcopper                      |      0 | {bio-dev}                                  | </span>
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</li>
<li id="2654e31016bcee9bbe05d462121706cc8ed368af">
<a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/e23315dd009a10a99bc6a16617d8493678dc51f9#2654e31016bcee9bbe05d462121706cc8ed368af"><strong>outdated_med-packages.txt</strong></a>
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1
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">Last-Update: Mon, 16 Mar 2020 <span class="idiff left right">01:42:04</span> +0000</span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">Last-Update: Mon, 16 Mar 2020 <span class="idiff left right">13:42:03</span> +0000</span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext"> source                        |             version             |        upstream_version         |                       uploaders                                             | Last uploader        |     Last uploaded      </span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext">-------------------------------+---------------------------------+---------------------------------+-----------------------------------------------------------------------------+----------------------+------------------------</span>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="31" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -31,7 +31,7 @@ Last-Update: Mon, 16 Mar 2020 01:42:04 +0000</td>
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<pre style="margin: 0;"> <span id="LC31" class="line" lang="plaintext"> gmap                          | 2019-09-12                      | 2020-03-12                      | Alexandre Mestiashvili,Andreas Tille,Shaun Jackman                          | Steffen Moeller      | 2019-12-30 12:37:15+00</span>
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<pre style="margin: 0;"> <span id="LC32" class="line" lang="plaintext"> hdmf                          | 1.5.4                           | 1.6.1                           | Yaroslav Halchenko                                                          | Yaroslav Halchenko   | 2020-02-03 03:01:25+00</span>
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<pre style="margin: 0;"> <span id="LC33" class="line" lang="plaintext"> htsjdk                        | 2.18.2                          | 2.21.3                          | Andreas Tille,Charles Plessy,Olivier Sallou,Vincent Danjean                 | Andreas Tille        | 2019-03-01 22:19:40+00</span>
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<pre style="margin: 0;">-<span id="LC34" class="line" lang="plaintext"> hyphy                         | 2.5.1                           | 2.5.<span class="idiff left right">5</span>                           | Andreas Tille                                                               | Andreas Tille        | 2020-01-07 21:19:50+00</span>
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<pre style="margin: 0;">+<span id="LC34" class="line" lang="plaintext"> hyphy                         | 2.5.1                           | 2.5.<span class="idiff left right">6</span>                           | Andreas Tille                                                               | Andreas Tille        | 2020-01-07 21:19:50+00</span>
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<pre style="margin: 0;"> <span id="LC35" class="line" lang="plaintext"> igdiscover                    | 0.11                            | 0.12.2                          | Steffen Moeller                                                             | Andreas Tille        | 2019-09-06 07:04:02+00</span>
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<pre style="margin: 0;"> <span id="LC36" class="line" lang="plaintext"> igraph                        | 0.8.0                           | 0.8.1                           | Andreas Tille                                                               | Andreas Tille        | 2020-03-14 20:10:56+00</span>
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<pre style="margin: 0;"> <span id="LC37" class="line" lang="plaintext"> igv                           | 2.4.17                          | 2.8.1                           | Andreas Tille,Olivier Sallou                                                | Andreas Tille        | 2019-01-30 15:11:57+00</span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="45" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="45" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<pre style="margin: 0;"> <span id="LC45" class="line" lang="plaintext"> libedlib                      | 1.2.4                           | 1.2.6                           | Andreas Tille                                                               | Andreas Tille        | 2019-08-19 00:34:56+00</span>
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<pre style="margin: 0;"> <span id="LC46" class="line" lang="plaintext"> libgclib                      | 0.11.4                          | 0.11.7                          | Andreas Tille,Michael R. Crusoe,Steffen Moeller                             | Michael R. Crusoe    | 2020-02-14 13:04:26+00</span>
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<pre style="margin: 0;"> <span id="LC47" class="line" lang="plaintext"> libjloda-java                 | 0.0+git20180523.cbaf6d1         | 0.0+git20200313.db8cd8f         | Andreas Tille                                                               | Andreas Tille        | 2018-05-25 21:49:43+00</span>
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<pre style="margin: 0;">-<span id="LC48" class="line" lang="plaintext"> libmaus2                      | 2.0.698                         | 2.0.7<span class="idiff left right">09</span>                         | Andreas Tille,Steffen Moeller                                               | Andreas Tille        | 2020-02-05 10:04:12+00</span>
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<pre style="margin: 0;">+<span id="LC48" class="line" lang="plaintext"> libmaus2                      | 2.0.698                         | 2.0.7<span class="idiff left right">11</span>                         | Andreas Tille,Steffen Moeller                                               | Andreas Tille        | 2020-02-05 10:04:12+00</span>
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<pre style="margin: 0;"> <span id="LC49" class="line" lang="plaintext"> libsis-base-java              | 18.09~pre1+git20180827.fe4953e  | 18.09~pre1+git20180928.45fbd31  | Andreas Tille,Olivier Sallou,Tim Booth                                      | Andreas Tille        | 2018-09-26 08:35:30+00</span>
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<pre style="margin: 0;"> <span id="LC50" class="line" lang="plaintext"> libundead                     | 1.0.10                          | 1.1.1                           | Andreas Tille                                                               | Andreas Tille        | 2019-09-13 21:06:10+00</span>
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<pre style="margin: 0;"> <span id="LC51" class="line" lang="plaintext"> metaphlan2                    | 2.9.22                          | 2.96.1                          | Andreas Tille                                                               | Andreas Tille        | 2019-11-08 07:19:11+00</span>
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<td class="diff-line-num unfold js-unfold new_line" data-linenumber="71" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<pre style="margin: 0;"> <span id="LC71" class="line" lang="plaintext"> python-cgecore                | 1.5.2                           | 1.5.3                           | Andreas Tille                                                               | Steffen Moeller      | 2020-01-06 17:05:53+00</span>
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<pre style="margin: 0;"> <span id="LC72" class="line" lang="plaintext"> python-cobra                  | 0.14.2                          | 0.17.1                          | Afif Elghraoui                                                              | Liubov Chuprikova    | 2019-03-02 06:49:44+00</span>
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<pre style="margin: 0;"> <span id="LC73" class="line" lang="plaintext"> python-colormap               | 1.0.2                           | 1.0.3                           | Andreas Tille                                                               | Andreas Tille        | 2019-12-06 16:51:43+00</span>
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<pre style="margin: 0;">-<span id="LC74" class="line" lang="plaintext"> python-pbcommand              | 1.1.1+git20191122.ec024c3       | 1.1.1+git20200304.58aa544       | Andreas Tille                                                               | Andreas Tille        | 2019-12-19 08:42:03+00</span>
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<pre style="margin: 0;">+<span id="LC74" class="line" lang="plaintext"> python-pbcommand              | 1.1.1+git20191122.ec024c3       | 1.1.1+git20200313.2a40099       | Andreas Tille                                                               | Andreas Tille        | 2019-12-19 08:42:03+00</span>
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<pre style="margin: 0;">+<span id="LC75" class="line" lang="plaintext"> python-pbcore                 | 1.7.1+git20200206.d66cbbf       | 1.7.1+git20200313.41ba394       | Andreas Tille                                                               | Andreas Tille        | 2020-02-25 08:42:20+00</span>
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<pre style="margin: 0;"> <span id="LC76" class="line" lang="plaintext"> python-pymummer               | 0.10.3                          | 0.11.0                          | Afif Elghraoui                                                              | Andreas Tille        | 2019-01-07 09:06:07+00</span>
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<pre style="margin: 0;"> <span id="LC77" class="line" lang="plaintext"> python-schema-salad           | 5.0.20200220195218              | 5.0.20200302192450              | Michael R. Crusoe                                                           | Michael R. Crusoe    | 2020-02-27 19:19:53+00</span>
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<pre style="margin: 0;"> <span id="LC78" class="line" lang="plaintext"> python-treetime               | 0.7.1                           | 0.7.4                           | Andreas Tille                                                               | Steffen Moeller      | 2020-01-18 20:52:48+00</span>
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<pre style="margin: 0;"> <span id="LC105" class="line" lang="plaintext"> unanimity                     | 3.3.0                           | 4.2.0                           | Afif Elghraoui,Andreas Tille                                                | Adrian Bunk          | 2019-02-06 07:34:42+00</span>
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<pre style="margin: 0;"> <span id="LC106" class="line" lang="plaintext"> vsearch                       | 2.14.1                          | 2.14.2                          | Andreas Tille,Tim Booth                                                     | Andreas Tille        | 2019-12-17 10:07:09+00</span>
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<pre style="margin: 0;"> <span id="LC107" class="line" lang="plaintext"> xmedcon                       | 0.16.1                          | 0.16.2                          | Andreas Tille,Roland Marcus Rutschmann                                      | Andreas Tille        | 2019-01-25 18:23:59+00</span>
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<pre style="margin: 0;">-<span id="LC107" class="line" lang="plaintext">(10<span class="idiff left right">2</span> rows)</span>
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<pre style="margin: 0;">+<span id="LC108" class="line" lang="plaintext">(10<span class="idiff left right">3</span> rows)</span>
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<pre style="margin: 0;"> <span id="LC110" class="line" lang="plaintext"></span>
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<td class="diff-line-num new_line" data-linenumber="111" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC111" class="line" lang="plaintext"> source                        |   id   | severity  |                                                                                           title                                                                                           </span>
</pre>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="189" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="190" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -189,7 +190,6 @@ Last-Update: Mon, 16 Mar 2020 01:42:04 +0000</td>
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<td class="diff-line-num new_line" data-linenumber="190" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC190" class="line" lang="plaintext"> insighttoolkit4               | 853752 | wishlist  | src:insighttoolkit4: Add documentation package</span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="190" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="diff-line-num new_line" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC191" class="line" lang="plaintext"> insighttoolkit4               | 943677 | normal    | please package insighttoolkit5 (5.0 and 5.1 beta 1 are out)</span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="191" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="diff-line-num new_line" data-linenumber="192" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC192" class="line" lang="plaintext"> insighttoolkit4               | 944179 | important | insighttoolkit4: non-standard gcc/g++ used for build (gcc-8)</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="192" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
192
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<td class="diff-line-num new_line old" data-linenumber="193" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
 
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<pre style="margin: 0;">-<span id="LC192" class="line" lang="plaintext"> insighttoolkit4               | 952599 | serious   | insighttoolkit4 build depends on the removed swig3.0</span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="193" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
193
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<td class="diff-line-num new_line" data-linenumber="193" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC193" class="line" lang="plaintext"> ismrmrd                       | 863168 | important | ismrmrd FTBFS on armhf: 1 failure is detected in the test module "ISMRMRD Unit Tests"</span>
</pre>
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194
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<td class="diff-line-num new_line" data-linenumber="194" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC194" class="line" lang="plaintext"> jellyfish1                    | 875328 | wishlist  | jellyfish1: FTBFS: __sync_val_compare_and_swap_8 undefined</span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="195" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
195
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<td class="diff-line-num new_line" data-linenumber="195" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC195" class="line" lang="plaintext"> khmer                         | 851830 | minor     | arm64 has flaky tests</span>
</pre>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="307" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="307" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -307,5 +307,5 @@ Last-Update: Mon, 16 Mar 2020 01:42:04 +0000</td>
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<td class="diff-line-num new_line" data-linenumber="307" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC307" class="line" lang="plaintext"> xmedcon                       | 671828 | normal    | xmedcon: Cannot open file with YBR photometric interpretation</span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="308" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC308" class="line" lang="plaintext"> xmedcon                       | 779707 | normal    | Errors when reading dicomdir file: "No images found" / "Loading: DICM Error reading file"</span>
</pre>
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<td class="diff-line-num old_line" data-linenumber="309" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<td class="diff-line-num new_line" data-linenumber="309" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
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<pre style="margin: 0;"> <span id="LC309" class="line" lang="plaintext"> xmedcon                       | 924017 | normal    | desktop entry</span>
</pre>
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<td class="diff-line-num old old_line" data-linenumber="310" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
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<td class="diff-line-num new_line old" data-linenumber="310" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #fac5cd; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#f9d7dc">
 
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<pre style="margin: 0;">-<span id="LC310" class="line" lang="plaintext">(19<span class="idiff left right">8</span> rows)</span>
</pre>
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</td>
<td class="diff-line-num new new_line" data-linenumber="310" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #c7f0d2; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#ddfbe6">
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<pre style="margin: 0;">+<span id="LC310" class="line" lang="plaintext">(19<span class="idiff left right">7</span> rows)</span>
</pre>
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<pre style="margin: 0;"> <span id="LC311" class="line" lang="plaintext"></span></pre>
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