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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/community/helper-scripts">Debian Med / community / helper-scripts</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/312a025b90e2e310906ba7b0c9b16cfeb70798be">312a025b</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-03-23T13:49:47+00:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">automatic update
</pre>
</li>
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<h4>2 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#f6d55d24085decec06151dd27f30199089d856ca">
debian-med-tests.txt
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</li>
<li class="file-stats">
<a href="#2654e31016bcee9bbe05d462121706cc8ed368af">
outdated_med-packages.txt
</a>
</li>
</ul>
<h4>Changes:</h4>
<li id="f6d55d24085decec06151dd27f30199089d856ca">
<a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/312a025b90e2e310906ba7b0c9b16cfeb70798be#f6d55d24085decec06151dd27f30199089d856ca"><strong>debian-med-tests.txt</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">Last-Update: Mon, 23 Mar 2020 <span class="idiff left right">01:42:44</span> +0000</span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">Last-Update: Mon, 23 Mar 2020 <span class="idiff left right">13:42:03</span> +0000</span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext"> Source | Vote | Tasks | Tags </span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext">-------------------------------+--------+--------------------------------------------+----------------------------------------------------------------------</span>
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="plaintext"> dcmtk | 17<span class="idiff left right">8</span> | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="plaintext"> orthanc | 102 | {<span class="idiff left right">imaging,practice</span>} | </span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext"> dcmtk | 17<span class="idiff left right">3</span> | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"> orthanc | 102 | {<span class="idiff left right">practice,imaging</span>} | </span>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext"> gdcm | 46 | {imaging-dev} | </span>
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<pre style="margin: 0;">-<span id="LC8" class="line" lang="plaintext"> orthanc-wsi | 43 | {<span class="idiff left right">laboratory,his,oncology,practice,imaging</span>} | </span>
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<pre style="margin: 0;">-<span id="LC9" class="line" lang="plaintext"> amide | 3<span class="idiff left right">5</span> | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext"> orthanc-wsi | 43 | {<span class="idiff left right">his,imaging,oncology,laboratory,practice</span>} | </span>
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext"> amide | 3<span class="idiff left right">3</span> | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC10" class="line" lang="plaintext"> htsjdk | 33 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="plaintext"> dcm2niix | 30 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="plaintext"> dicomscope | 29 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC13" class="line" lang="plaintext"> dicom3tools | 2<span class="idiff left right">5</span> | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="plaintext"> dicom3tools | 2<span class="idiff left right">4</span> | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC14" class="line" lang="plaintext"> gnumed-server | 19 | {practice} | </span>
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<pre style="margin: 0;">-<span id="LC15" class="line" lang="plaintext"> pixelmed | 18 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC16" class="line" lang="plaintext"> gdcm | 16 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC17" class="line" lang="plaintext"> minc-tools | 16 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="plaintext"> pixelmed | 17 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC16" class="line" lang="plaintext"> ngs-sdk | 16 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC17" class="line" lang="plaintext"> biojava-live | 15 | {bio-dev} | </span>
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="plaintext"> gdcm | 15 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC19" class="line" lang="plaintext"> invesalius | 15 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="plaintext"> minc-tools | 15 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC21" class="line" lang="plaintext"> openslide | 15 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC22" class="line" lang="plaintext"> adun.app | 14 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC23" class="line" lang="plaintext"> insighttoolkit4 | 14 | {imaging-dev} | </span>
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<pre style="margin: 0;">-<span id="LC24" class="line" lang="plaintext"> king | 14 | {typesetting,imaging} | </span>
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<pre style="margin: 0;">-<span id="LC25" class="line" lang="plaintext"> vtk-dicom | 14 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC26" class="line" lang="plaintext"> ncbi-entrez-direct | 13 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC27" class="line" lang="plaintext"> plastimatch | 13 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC23" class="line" lang="plaintext"> insighttoolkit4 | 13 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC24" class="line" lang="plaintext"> psychopy | 13 | {psychology} | </span>
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<pre style="margin: 0;">-<span id="LC29" class="line" lang="plaintext"> librg-utils-perl | 11 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC30" class="line" lang="plaintext"> tree-puzzle | 11 | {bio,bio-phylogeny,cloud} | </span>
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<pre style="margin: 0;">-<span id="LC31" class="line" lang="plaintext"> biosig4c++ | 10 | {imaging,physics} | </span>
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<pre style="margin: 0;">+<span id="LC25" class="line" lang="plaintext"> vtk-dicom | 13 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC26" class="line" lang="plaintext"> king | 12 | {imaging,typesetting} | </span>
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<pre style="margin: 0;">+<span id="LC27" class="line" lang="plaintext"> ncbi-entrez-direct | 12 | {bio} | </span>
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<pre style="margin: 0;">+<span id="LC28" class="line" lang="plaintext"> jebl2 | 11 | {bio-dev} | </span>
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<pre style="margin: 0;">+<span id="LC29" class="line" lang="plaintext"> plastimatch | 11 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC30" class="line" lang="plaintext"> tree-puzzle | 11 | {bio-phylogeny,cloud,bio} | </span>
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<pre style="margin: 0;">+<span id="LC31" class="line" lang="plaintext"> cgview | 10 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC32" class="line" lang="plaintext"> diamond-aligner | 10 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC33" class="line" lang="plaintext"> <span class="idiff left right">jebl2 | 10 | {bio-dev}</span> | </span>
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<pre style="margin: 0;">+<span id="LC33" class="line" lang="plaintext"> <span class="idiff left right">librg-utils-perl | 10 | {bio} </span> | </span>
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<pre style="margin: 0;"> <span id="LC34" class="line" lang="plaintext"> mia | 10 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC35" class="line" lang="plaintext"> norsp | 10 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC36" class="line" lang="plaintext"> radiant | 10 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC36" class="line" lang="plaintext"> staden | 10 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC38" class="line" lang="plaintext"> <span class="idiff left right">cgview | 9 | {bio} </span> | </span>
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<pre style="margin: 0;">+<span id="LC37" class="line" lang="plaintext"> <span class="idiff left right">biosig4c++ | 9 | {physics,imaging}</span> | </span>
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<pre style="margin: 0;"> <span id="LC38" class="line" lang="plaintext"> ea-utils | 9 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC40" class="line" lang="plaintext"> fastlink | 9 | {<span class="idiff left right">cloud,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC39" class="line" lang="plaintext"> fastlink | 9 | {<span class="idiff left right">bio,cloud</span>} | </span>
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<pre style="margin: 0;"> <span id="LC40" class="line" lang="plaintext"> king-probe | 9 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC42" class="line" lang="plaintext"> mipe | 9 | {<span class="idiff left right">bio,cloud</span>} | </span>
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<pre style="margin: 0;">+<span id="LC41" class="line" lang="plaintext"> mipe | 9 | {<span class="idiff left right">cloud,bio</span>} | </span>
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<pre style="margin: 0;"> <span id="LC42" class="line" lang="plaintext"> ncbi-seg | 9 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC44" class="line" lang="plaintext"> ngs-sdk | 9 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC43" class="line" lang="plaintext"> paml | 9 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC46" class="line" lang="plaintext"> seqsero | 9 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC47" class="line" lang="plaintext"> ampliconnoise | 8 | {cloud,bio} | </span>
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<pre style="margin: 0;">-<span id="LC48" class="line" lang="plaintext"> arden | 8 | {bio,cloud} | </span>
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<pre style="margin: 0;">+<span id="LC44" class="line" lang="plaintext"> radiant | 9 | {bio} | </span>
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<pre style="margin: 0;">+<span id="LC45" class="line" lang="plaintext"> ampliconnoise | 8 | {bio,cloud} | </span>
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<pre style="margin: 0;"> <span id="LC46" class="line" lang="plaintext"> bppsuite | 8 | {bio} | </span>
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<pre style="margin: 0;">+<span id="LC47" class="line" lang="plaintext"> dazzdb | 8 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC48" class="line" lang="plaintext"> ecopcr | 8 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC51" class="line" lang="plaintext"> gasic | 8 | {cloud,bio} | </span>
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<pre style="margin: 0;"> <span id="LC49" class="line" lang="plaintext"> gdcm | 8 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC50" class="line" lang="plaintext"> hunspell-en-med | 8 | {tools} | </span>
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<pre style="margin: 0;">-<span id="LC54" class="line" lang="plaintext"> <span class="idiff left right">jaligner | 8 | {bio} </span> | </span>
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<pre style="margin: 0;">+<span id="LC51" class="line" lang="plaintext"> <span class="idiff left right">libminc | 8 | {imaging-dev}</span> | </span>
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<pre style="margin: 0;"> <span id="LC52" class="line" lang="plaintext"> maqview | 8 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC53" class="line" lang="plaintext"> mauve-aligner | 8 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC57" class="line" lang="plaintext"> melting | 8 | {cloud,bio} | </span>
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<pre style="margin: 0;">-<span id="LC58" class="line" lang="plaintext"> neobio | 8 | {bio,cloud} | </span>
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<pre style="margin: 0;">+<span id="LC54" class="line" lang="plaintext"> melting | 8 | {bio,cloud} | </span>
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<pre style="margin: 0;">+<span id="LC55" class="line" lang="plaintext"> neobio | 8 | {cloud,bio} | </span>
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<pre style="margin: 0;">+<span id="LC56" class="line" lang="plaintext"> ngs-sdk | 8 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC57" class="line" lang="plaintext"> obitools | 8 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC60" class="line" lang="plaintext"> phyutility | 8 | {<span class="idiff left right">cloud,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC58" class="line" lang="plaintext"> phyutility | 8 | {<span class="idiff left right">bio,cloud</span>} | </span>
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<pre style="margin: 0;"> <span id="LC59" class="line" lang="plaintext"> piler | 8 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC62" class="line" lang="plaintext"> sigma-align | 8 | {cloud,bio-phylogeny,bio} | </span>
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<pre style="margin: 0;">+<span id="LC60" class="line" lang="plaintext"> seqsero | 8 | {bio} | </span>
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<pre style="margin: 0;">+<span id="LC61" class="line" lang="plaintext"> sigma-align | 8 | {bio-phylogeny,bio,cloud} | </span>
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<pre style="margin: 0;"> <span id="LC62" class="line" lang="plaintext"> alter-sequence-alignment | 7 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC64" class="line" lang="plaintext"> anfo | 7 | {bio,cloud} | </span>
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<pre style="margin: 0;">+<span id="LC63" class="line" lang="plaintext"> anfo | 7 | {cloud,bio} | </span>
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<pre style="margin: 0;">+<span id="LC64" class="line" lang="plaintext"> arden | 7 | {cloud,bio} | </span>
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<pre style="margin: 0;"> <span id="LC65" class="line" lang="plaintext"> biomaj3-cli | 7 | {cloud} | </span>
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<pre style="margin: 0;">-<span id="LC66" class="line" lang="plaintext"> bio-tradis | 7 | {bio<span class="idiff left right">-dev,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC66" class="line" lang="plaintext"> bio-tradis | 7 | {bio<span class="idiff left right">,bio-dev</span>} | </span>
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<pre style="margin: 0;"> <span id="LC67" class="line" lang="plaintext"> codonw | 7 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC68" class="line" lang="plaintext"> daligner | 7 | {bio,bio-ngs} | </span>
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<pre style="margin: 0;">-<span id="LC69" class="line" lang="plaintext"> dazzdb | 7 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC70" class="line" lang="plaintext"> dicompyler | 7 | {oncology} | </span>
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<pre style="margin: 0;">+<span id="LC68" class="line" lang="plaintext"> daligner | 7 | {bio-ngs,bio} | </span>
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<pre style="margin: 0;"> <span id="LC69" class="line" lang="plaintext"> edtsurf | 7 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC70" class="line" lang="plaintext"> embassy-domainatrix | 7 | {bio,cloud} | </span>
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<pre style="margin: 0;"> <span id="LC71" class="line" lang="plaintext"> embassy-domalign | 7 | {cloud,bio} | </span>
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<pre style="margin: 0;">-<span id="LC74" class="line" lang="plaintext"> embassy-domsearch | 7 | {<span class="idiff left right">cloud,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC72" class="line" lang="plaintext"> embassy-domsearch | 7 | {<span class="idiff left right">bio,cloud</span>} | </span>
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<pre style="margin: 0;"> <span id="LC73" class="line" lang="plaintext"> estscan | 7 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC74" class="line" lang="plaintext"> fitgcp | 7 | {cloud,bio} | </span>
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<pre style="margin: 0;"> <span id="LC75" class="line" lang="plaintext"> freebayes | 7 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC78" class="line" lang="plaintext"> freecontact | 7 | {bio,cloud} | </span>
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<pre style="margin: 0;">+<span id="LC76" class="line" lang="plaintext"> freecontact | 7 | {cloud,bio} | </span>
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<pre style="margin: 0;">+<span id="LC77" class="line" lang="plaintext"> gasic | 7 | {bio,cloud} | </span>
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<pre style="margin: 0;">+<span id="LC78" class="line" lang="plaintext"> jaligner | 7 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC79" class="line" lang="plaintext"> lagan | 7 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC80" class="line" lang="plaintext"> l<span class="idiff left right">ibminc | 7 | {imaging-dev}</span> | </span>
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<pre style="margin: 0;">+<span id="LC80" class="line" lang="plaintext"> l<span class="idiff left right">amarc | 7 | {bio} </span> | </span>
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<pre style="margin: 0;"> <span id="LC81" class="line" lang="plaintext"> lucy | 7 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC82" class="line" lang="plaintext"> microbegps | 7 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC83" class="line" lang="plaintext"> paraclu | 7 | {<span class="idiff left right">bio,cloud</span>} | </span>
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<pre style="margin: 0;">+<span id="LC83" class="line" lang="plaintext"> paraclu | 7 | {<span class="idiff left right">cloud,bio</span>} | </span>
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<pre style="margin: 0;"> <span id="LC84" class="line" lang="plaintext"> perm | 7 | {bio,cloud} | </span>
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<pre style="margin: 0;"> <span id="LC85" class="line" lang="plaintext"> phast | 7 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC86" class="line" lang="plaintext"> placnet | 7 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC87" class="line" lang="plaintext"> poretools | 7 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC88" class="line" lang="plaintext"> predictprotein | 7 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC89" class="line" lang="plaintext"> prime-phylo | 7 | {<span class="idiff left right">cloud,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC89" class="line" lang="plaintext"> prime-phylo | 7 | {<span class="idiff left right">bio,cloud</span>} | </span>
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<pre style="margin: 0;"> <span id="LC90" class="line" lang="plaintext"> probabel | 7 | {bio,cloud} | </span>
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<pre style="margin: 0;"> <span id="LC91" class="line" lang="plaintext"> pscan-tfbs | 7 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC92" class="line" lang="plaintext"> sibsim4 | 7 | {bio,cloud} | </span>
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<pre style="margin: 0;">-<span id="LC93" class="line" lang="plaintext"> treeview | 7 | {bio,bio-phylogeny} | </span>
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<pre style="margin: 0;"> <span id="LC93" class="line" lang="plaintext"> abacas | 6 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC95" class="line" lang="plaintext"> assemblytics | 6 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC94" class="line" lang="plaintext"> baitfisher | 6 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC95" class="line" lang="plaintext"> beast2-mcmc | 6 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC96" class="line" lang="plaintext"> bio-rainbow | 6 | {bio} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -101,22 +99,21 @@ Last-Update: Mon, 23 Mar 2020 01:42:44 +0000</td>
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<pre style="margin: 0;"> <span id="LC99" class="line" lang="plaintext"> centrifuge | 6 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC100" class="line" lang="plaintext"> clonalframeml | 6 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC101" class="line" lang="plaintext"> dascrubber | 6 | {bio} | </span>
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<pre style="margin: 0;">+<span id="LC102" class="line" lang="plaintext"> dicompyler | 6 | {oncology} | </span>
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<pre style="margin: 0;"> <span id="LC103" class="line" lang="plaintext"> elph | 6 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC104" class="line" lang="plaintext"> gatb-core | 6 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC105" class="line" lang="plaintext"> harvest-tools | 6 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC106" class="line" lang="plaintext"> indelible | 6 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC107" class="line" lang="plaintext"> ipig | 6 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC109" class="line" lang="plaintext"> <span class="idiff left right">lamarc </span> | 6 | {bio} | </span>
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<pre style="margin: 0;">+<span id="LC108" class="line" lang="plaintext"> <span class="idiff left right">jellyfish1</span> | 6 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC109" class="line" lang="plaintext"> libdivsufsort | 6 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC110" class="line" lang="plaintext"> libncl | 6 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC111" class="line" lang="plaintext"> libpal-java | 6 | {bio-dev} | </span>
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<pre style="margin: 0;">-<span id="LC113" class="line" lang="plaintext"> libsbml | 6 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC112" class="line" lang="plaintext"> mapsembler2 | 6 | {bio,cloud} | </span>
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<pre style="margin: 0;">-<span id="LC115" class="line" lang="plaintext"> mhap | 6 | {bio,bio-ngs} | </span>
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<pre style="margin: 0;">-<span id="LC116" class="line" lang="plaintext"> mlv-smile | 6 | {bio,cloud} | </span>
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<pre style="margin: 0;">+<span id="LC113" class="line" lang="plaintext"> mlv-smile | 6 | {cloud,bio} | </span>
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<pre style="margin: 0;"> <span id="LC114" class="line" lang="plaintext"> murasaki | 6 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC115" class="line" lang="plaintext"> orthanc-webviewer | 6 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC119" class="line" lang="plaintext"> proalign | 6 | {bio<span class="idiff left right">-phylogeny,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC116" class="line" lang="plaintext"> proalign | 6 | {bio<span class="idiff left right">,bio-phylogeny</span>} | </span>
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<pre style="margin: 0;"> <span id="LC117" class="line" lang="plaintext"> pscan-chip | 6 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC118" class="line" lang="plaintext"> rambo-k | 6 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC119" class="line" lang="plaintext"> rdp-readseq | 6 | {bio} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -125,13 +122,17 @@ Last-Update: Mon, 23 Mar 2020 01:42:44 +0000</td>
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<pre style="margin: 0;"> <span id="LC122" class="line" lang="plaintext"> seqtools | 6 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC123" class="line" lang="plaintext"> sickle | 6 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC124" class="line" lang="plaintext"> spread-phy | 6 | {bio,bio-phylogeny} | </span>
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<pre style="margin: 0;">-<span id="LC128" class="line" lang="plaintext"> squizz | 6 | {<span class="idiff left right">bio,cloud</span>} | </span>
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<pre style="margin: 0;">+<span id="LC125" class="line" lang="plaintext"> squizz | 6 | {<span class="idiff left right">cloud,bio</span>} | </span>
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<pre style="margin: 0;"> <span id="LC126" class="line" lang="plaintext"> transtermhp | 6 | {bio} | </span>
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<pre style="margin: 0;">+<span id="LC127" class="line" lang="plaintext"> treeview | 6 | {bio-phylogeny,bio} | </span>
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<pre style="margin: 0;"> <span id="LC128" class="line" lang="plaintext"> vsearch | 6 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC129" class="line" lang="plaintext"> zalign | 6 | {bio,cloud} | </span>
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<pre style="margin: 0;"> <span id="LC130" class="line" lang="plaintext"> andi | 5 | {bio} | </span>
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<pre style="margin: 0;">+<span id="LC131" class="line" lang="plaintext"> assemblytics | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC132" class="line" lang="plaintext"> bandage | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC133" class="line" lang="plaintext"> beads | 5 | {bio} | </span>
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<pre style="margin: 0;">+<span id="LC134" class="line" lang="plaintext"> beast-mcmc | 5 | {bio,bio-phylogeny} | </span>
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<pre style="margin: 0;">+<span id="LC135" class="line" lang="plaintext"> biomaj3-daemon | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC136" class="line" lang="plaintext"> brig | 5 | {bio} | </span>
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137
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<pre style="margin: 0;"> <span id="LC137" class="line" lang="plaintext"> clonalorigin | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC138" class="line" lang="plaintext"> cluster3 | 5 | {bio} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -139,17 +140,17 @@ Last-Update: Mon, 23 Mar 2020 01:42:44 +0000</td>
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<pre style="margin: 0;"> <span id="LC140" class="line" lang="plaintext"> elastix | 5 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC141" class="line" lang="plaintext"> ghmm | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC142" class="line" lang="plaintext"> hinge | 5 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC142" class="line" lang="plaintext"> jellyfish1 | 5 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC143" class="line" lang="plaintext"> jmodeltest | 5 | {bio-phylogeny,bio} | </span>
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<pre style="margin: 0;">+<span id="LC143" class="line" lang="plaintext"> jmodeltest | 5 | {bio,bio-phylogeny} | </span>
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<pre style="margin: 0;"> <span id="LC144" class="line" lang="plaintext"> librdp-taxonomy-tree-java | 5 | {bio-dev} | </span>
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<pre style="margin: 0;">+<span id="LC145" class="line" lang="plaintext"> libsbml | 5 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC146" class="line" lang="plaintext"> logol | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC147" class="line" lang="plaintext"> maffilter | 5 | {bio} | </span>
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<pre style="margin: 0;">+<span id="LC148" class="line" lang="plaintext"> mhap | 5 | {bio,bio-ngs} | </span>
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<pre style="margin: 0;"> <span id="LC149" class="line" lang="plaintext"> mptp | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC150" class="line" lang="plaintext"> openslide | 5 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC151" class="line" lang="plaintext"> patman | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC152" class="line" lang="plaintext"> phipack | 5 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC151" class="line" lang="plaintext"> plasmidseeker | 5 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC152" class="line" lang="plaintext"> prottest | 5 | {bio,bio-phylogeny} | </span>
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<pre style="margin: 0;">+<span id="LC153" class="line" lang="plaintext"> prottest | 5 | {bio-phylogeny,bio} | </span>
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<pre style="margin: 0;"> <span id="LC154" class="line" lang="plaintext"> pymia | 5 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC155" class="line" lang="plaintext"> quorum | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC156" class="line" lang="plaintext"> rdp-classifier | 5 | {bio} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -158,8 +159,6 @@ Last-Update: Mon, 23 Mar 2020 01:42:44 +0000</td>
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159
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<pre style="margin: 0;"> <span id="LC159" class="line" lang="plaintext"> sprai | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC160" class="line" lang="plaintext"> tracetuner | 5 | {bio} | </span>
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161
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<pre style="margin: 0;"> <span id="LC161" class="line" lang="plaintext"> tvc | 5 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC161" class="line" lang="plaintext"> beast-mcmc | 4 | {bio-phylogeny,bio} | </span>
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<pre style="margin: 0;">-<span id="LC162" class="line" lang="plaintext"> biomaj3-daemon | 4 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC162" class="line" lang="plaintext"> delly | 4 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC163" class="line" lang="plaintext"> dindel | 4 | {bio} | </span>
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164
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<pre style="margin: 0;"> <span id="LC164" class="line" lang="plaintext"> fastml | 4 | {bio} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -169,6 +168,7 @@ Last-Update: Mon, 23 Mar 2020 01:42:44 +0000</td>
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168
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<pre style="margin: 0;"> <span id="LC168" class="line" lang="plaintext"> pbdagcon | 4 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC169" class="line" lang="plaintext"> phybin | 4 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC170" class="line" lang="plaintext"> pilon | 4 | {bio} | </span>
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<pre style="margin: 0;">+<span id="LC171" class="line" lang="plaintext"> plasmidseeker | 4 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC172" class="line" lang="plaintext"> rampler | 4 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC173" class="line" lang="plaintext"> rdp-alignment | 4 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC174" class="line" lang="plaintext"> relion | 4 | {bio} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -192,7 +192,7 @@ Last-Update: Mon, 23 Mar 2020 01:42:44 +0000</td>
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192
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<pre style="margin: 0;"> <span id="LC192" class="line" lang="plaintext"> orthanc-mysql | 3 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC193" class="line" lang="plaintext"> qcumber | 3 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC194" class="line" lang="plaintext"> qrisk2 | 3 | {practice} | </span>
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<pre style="margin: 0;">-<span id="LC195" class="line" lang="plaintext"> rtax | 3 | {<span class="idiff left right">bio,cloud</span>} | </span>
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<pre style="margin: 0;">+<span id="LC195" class="line" lang="plaintext"> rtax | 3 | {<span class="idiff left right">cloud,bio</span>} | </span>
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<pre style="margin: 0;"> <span id="LC196" class="line" lang="plaintext"> segemehl | 3 | {bio} | </span>
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197
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<pre style="margin: 0;"> <span id="LC197" class="line" lang="plaintext"> seqmagick | 3 | {bio} | </span>
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198
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<pre style="margin: 0;"> <span id="LC198" class="line" lang="plaintext"> sga | 3 | {bio} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -204,6 +204,7 @@ Last-Update: Mon, 23 Mar 2020 01:42:44 +0000</td>
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204
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<pre style="margin: 0;"> <span id="LC204" class="line" lang="plaintext"> tnseq-transit | 3 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC205" class="line" lang="plaintext"> biosig4c++ | 2 | {imaging-dev,physics} | </span>
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<pre style="margin: 0;"> <span id="LC206" class="line" lang="plaintext"> ctn | 2 | {imaging-dev} | </span>
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<pre style="margin: 0;">+<span id="LC207" class="line" lang="plaintext"> cufflinks | 2 | {bio,cloud} | </span>
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<pre style="margin: 0;"> <span id="LC208" class="line" lang="plaintext"> getdata | 2 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC209" class="line" lang="plaintext"> kma | 2 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC210" class="line" lang="plaintext"> kmerresistance | 2 | {bio} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -215,14 +216,13 @@ Last-Update: Mon, 23 Mar 2020 01:42:44 +0000</td>
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<pre style="margin: 0;"> <span id="LC216" class="line" lang="plaintext"> skesa | 2 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC217" class="line" lang="plaintext"> spaced | 2 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC218" class="line" lang="plaintext"> srf | 2 | {bio-dev} | </span>
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<pre style="margin: 0;">-<span id="LC218" class="line" lang="plaintext"> tree-puzzle | 2 | {<span class="idiff left right">bio,cloud</span>,bio-phylogeny} | </span>
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<pre style="margin: 0;">+<span id="LC219" class="line" lang="plaintext"> tree-puzzle | 2 | {<span class="idiff left right">cloud,bio</span>,bio-phylogeny} | </span>
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<pre style="margin: 0;"> <span id="LC220" class="line" lang="plaintext"> varscan | 2 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC221" class="line" lang="plaintext"> volpack | 2 | {imaging-dev} | </span>
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<pre style="margin: 0;">-<span id="LC221" class="line" lang="plaintext"> acedb | 1 | {<span class="idiff left right">cloud,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC222" class="line" lang="plaintext"> acedb | 1 | {<span class="idiff left right">bio,cloud</span>} | </span>
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<pre style="margin: 0;"> <span id="LC223" class="line" lang="plaintext"> atropos | 1 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC224" class="line" lang="plaintext"> biosig4c++ | 1 | {imaging-dev,physics} | </span>
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<pre style="margin: 0;"> <span id="LC225" class="line" lang="plaintext"> blimps | 1 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC225" class="line" lang="plaintext"> cufflinks | 1 | {bio,cloud} | </span>
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<pre style="margin: 0;"> <span id="LC226" class="line" lang="plaintext"> edflib | 1 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC227" class="line" lang="plaintext"> embassy-phylip | 1 | {cloud,bio} | </span>
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<pre style="margin: 0;"> <span id="LC228" class="line" lang="plaintext"> fasta3 | 1 | {bio} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -234,6 +234,7 @@ Last-Update: Mon, 23 Mar 2020 01:42:44 +0000</td>
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<pre style="margin: 0;"> <span id="LC234" class="line" lang="plaintext"> libvistaio | 1 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC235" class="line" lang="plaintext"> maxflow | 1 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC236" class="line" lang="plaintext"> mencal | 1 | {tools} | </span>
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<pre style="margin: 0;">+<span id="LC237" class="line" lang="plaintext"> nutsqlite | 1 | {tools} | </span>
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<pre style="margin: 0;"> <span id="LC238" class="line" lang="plaintext"> opensurgsim | 1 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC239" class="line" lang="plaintext"> orthanc-postgresql | 1 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC240" class="line" lang="plaintext"> pal2nal | 1 | {bio} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -292,12 +293,10 @@ Last-Update: Mon, 23 Mar 2020 01:42:44 +0000</td>
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<pre style="margin: 0;"> <span id="LC293" class="line" lang="plaintext"> murasaki | 0 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC294" class="line" lang="plaintext"> ncbi-vdb | 0 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC295" class="line" lang="plaintext"> ngs-sdk | 0 | {bio-dev} | </span>
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<pre style="margin: 0;">-<span id="LC295" class="line" lang="plaintext"> nutsqlite | 0 | {tools} | </span>
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<pre style="margin: 0;"> <span id="LC296" class="line" lang="plaintext"> orthanc-imagej | 0 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC297" class="line" lang="plaintext"> oscar | 0 | {<span class="idiff left right">data,practice,tools</span>} | </span>
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<pre style="margin: 0;">+<span id="LC297" class="line" lang="plaintext"> oscar | 0 | {<span class="idiff left right">tools,data,practice</span>} | </span>
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<pre style="margin: 0;"> <span id="LC298" class="line" lang="plaintext"> pbcopper | 0 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC299" class="line" lang="plaintext"> pbseqlib | 0 | {bio-dev} | </span>
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<pre style="margin: 0;">-<span id="LC300" class="line" lang="plaintext"> python-deeptools | 0 | {bio,bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC300" class="line" lang="plaintext"> python-py2bit | 0 | {bio,bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC301" class="line" lang="plaintext"> relion | 0 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC302" class="line" lang="plaintext"> relion | 0 | {bio-dev} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -312,5 +311,5 @@ Last-Update: Mon, 23 Mar 2020 01:42:44 +0000</td>
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<pre style="margin: 0;"> <span id="LC311" class="line" lang="plaintext"> spaln | 0 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC312" class="line" lang="plaintext"> trim-galore | 0 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC313" class="line" lang="plaintext"> varna | 0 | {bio} | </span>
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<pre style="margin: 0;">+<span id="LC314" class="line" lang="plaintext">(3<span class="idiff left right">39</span> rows)</span>
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<a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/312a025b90e2e310906ba7b0c9b16cfeb70798be#2654e31016bcee9bbe05d462121706cc8ed368af"><strong>outdated_med-packages.txt</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">Last-Update: Mon, 23 Mar 2020 <span class="idiff left right">01:42:45</span> +0000</span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">Last-Update: Mon, 23 Mar 2020 <span class="idiff left right">13:42:03</span> +0000</span>
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<pre style="margin: 0;">-<span id="LC3" class="line" lang="plaintext"> source | version | upstream_version | uploaders | Last uploader | Last uploaded </span>
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<pre style="margin: 0;">-<span id="LC4" class="line" lang="plaintext">-------------------------------+---------------------------------+---------------------------------+---------------------------------------------------------------------------+----------------------+------------------------</span>
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="plaintext"> andi | 0.12 | 0.13 | Fabian Klötzl | Andreas Tille | 2018-10-27 17:50:30+00</span>
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="plaintext"> artemis | 17.0.1 | 18.1.0 | Andreas Tille | Andreas Tille | 2019-02-08 11:19:24+00</span>
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<pre style="margin: 0;">-<span id="LC7" class="line" lang="plaintext"> baitfisher | 1.2.7+git20180107.e92dbf2 | 1.2.7+git20190123.241d060 | Olivier Sallou | Andreas Tille | 2018-09-24 13:04:18+00</span>
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<pre style="margin: 0;">-<span id="LC8" class="line" lang="plaintext"> beagle | 5.1-191125 | 200313 | Dylan Aïssi | Dylan Aïssi | 2019-12-14 18:34:10+00</span>
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<pre style="margin: 0;">-<span id="LC9" class="line" lang="plaintext"> biobambam2 | 2.0.153 | 2.0.159+ds | Andreas Tille | Andreas Tille | 2020-02-05 13:20:41+00</span>
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<pre style="margin: 0;">-<span id="LC10" class="line" lang="plaintext"> biomaj3 | 3.1.14 | 3.1.16 | Olivier Sallou | Olivier Sallou | 2020-02-08 18:22:42+00</span>
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<pre style="margin: 0;">-<span id="LC11" class="line" lang="plaintext"> biomaj3-core | 3.0.19 | 3.0.22 | Olivier Sallou | Olivier Sallou | 2019-11-12 11:20:23+00</span>
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<pre style="margin: 0;">-<span id="LC12" class="line" lang="plaintext"> biomaj3-process | 3.0.15 | 3.0.16 | Olivier Sallou | Olivier Sallou | 2019-11-12 11:20:38+00</span>
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<pre style="margin: 0;">-<span id="LC13" class="line" lang="plaintext"> biosig4c++ | 1.9.5 | 2.0.2 | Michael Hanke,Yaroslav Halchenko | Andreas Tille | 2020-03-02 08:38:37+00</span>
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<pre style="margin: 0;">-<span id="LC14" class="line" lang="plaintext"> cwltool | 2.0.20200224214940 | 3.0.20200317203547 | Michael R. Crusoe | Michael R. Crusoe | 2020-02-26 12:07:54+00</span>
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<pre style="margin: 0;">-<span id="LC15" class="line" lang="plaintext"> ea-utils | 1.1.2 | 1.04.807 | Andreas Tille,Tim Booth | Andreas Tille | 2018-04-26 21:48:01+00</span>
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<pre style="margin: 0;">-<span id="LC16" class="line" lang="plaintext"> edfbrowser | 1.72 | 1.73 | Andreas Tille | Andreas Tille | 2020-02-14 15:02:37+00</span>
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<pre style="margin: 0;">-<span id="LC17" class="line" lang="plaintext"> fis-gtm | 6.3-007 | 6.3-010 | Amul Shah,Andreas Tille | Amul Shah | 2019-02-28 14:12:19+00</span>
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<pre style="margin: 0;">-<span id="LC18" class="line" lang="plaintext"> gatb-core | 1.4.1+git20191209.9398f28 | 1.4.1+git20200118.1dc23ff | Andreas Tille,Nadiya Sitdykova | Michael R. Crusoe | 2020-02-17 14:52:30+00</span>
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<pre style="margin: 0;">-<span id="LC19" class="line" lang="plaintext"> gdcm | 3.0.4 | 3.0.5 | Gert Wollny,Sébastien Jodogne,Steve M. Robbins | Gert Wollny | 2019-11-07 11:49:02+00</span>
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<pre style="margin: 0;">-<span id="LC20" class="line" lang="plaintext"> gmap | 2019-09-12 | 2020-03-12 | Alexandre Mestiashvili,Andreas Tille,Shaun Jackman | Steffen Moeller | 2019-12-30 12:37:15+00</span>
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<pre style="margin: 0;">-<span id="LC21" class="line" lang="plaintext"> hdmf | 1.5.4 | 1.6.1 | Yaroslav Halchenko | Yaroslav Halchenko | 2020-02-03 03:01:25+00</span>
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<pre style="margin: 0;">-<span id="LC22" class="line" lang="plaintext"> hyphy | 2.5.1 | 2.5.7 | Andreas Tille | Andreas Tille | 2020-01-07 21:19:50+00</span>
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<pre style="margin: 0;">-<span id="LC23" class="line" lang="plaintext"> igdiscover | 0.11 | 0.12.2 | Steffen Moeller | Andreas Tille | 2019-09-06 07:04:02+00</span>
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<pre style="margin: 0;">-<span id="LC24" class="line" lang="plaintext"> igv | 2.4.17 | 2.8.1 | Andreas Tille,Olivier Sallou | Andreas Tille | 2019-01-30 15:11:57+00</span>
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<pre style="margin: 0;">-<span id="LC25" class="line" lang="plaintext"> imagej | 1.52r | 1.52u | David Miguel Susano Pinto | Andreas Tille | 2019-12-04 14:55:11+00</span>
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<pre style="margin: 0;">-<span id="LC26" class="line" lang="plaintext"> ismrmrd | 1.4.0 | 1.4.1 | Ghislain Antony Vaillant | Andreas Tille | 2019-01-26 07:49:20+00</span>
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<pre style="margin: 0;">-<span id="LC27" class="line" lang="plaintext"> jebl2 | 0.1+git20180418.653eb83 | 0.1+git20190308.a98448e | Andreas Tille | Andreas Tille | 2018-07-05 12:05:57+00</span>
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<pre style="margin: 0;">-<span id="LC28" class="line" lang="plaintext"> kallisto | 0.46.1 | 0.46.2 | Andreas Tille | Michael R. Crusoe | 2019-12-27 07:19:20+00</span>
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<pre style="margin: 0;">-<span id="LC29" class="line" lang="plaintext"> kineticstools | 0.6.1+git20180425.27a1878 | 0.6.1+git20190618.0ac41a0 | Andreas Tille | Andreas Tille | 2019-02-14 13:26:09+00</span>
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<pre style="margin: 0;">-<span id="LC30" class="line" lang="plaintext"> king-probe | 2.16.160404+git20180613.a09b012 | 2.16.160404+git20200121.9b198c1 | Andreas Tille,Malihe Asemani,Michael Prisant | Andreas Tille | 2018-07-16 07:34:48+00</span>
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<pre style="margin: 0;">-<span id="LC31" class="line" lang="plaintext"> last-align | 1047 | 1060 | Andreas Tille,Charles Plessy | Michael R. Crusoe | 2020-01-24 15:34:18+00</span>
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<pre style="margin: 0;">-<span id="LC32" class="line" lang="plaintext"> libbioparser-dev | 2.0.1 | 2.1.2 | Andreas Tille | Andreas Tille | 2019-07-15 13:35:45+00</span>
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<pre style="margin: 0;">-<span id="LC33" class="line" lang="plaintext"> libedlib | 1.2.4 | 1.2.6 | Andreas Tille | Andreas Tille | 2019-08-19 00:34:56+00</span>
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<pre style="margin: 0;">-<span id="LC34" class="line" lang="plaintext"> libjloda-java | 0.0+git20180523.cbaf6d1 | 0.0+git20200318.6fef1b7 | Andreas Tille | Andreas Tille | 2018-05-25 21:49:43+00</span>
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<pre style="margin: 0;">-<span id="LC35" class="line" lang="plaintext"> libsis-base-java | 18.09~pre1+git20180827.fe4953e | 18.09~pre1+git20180928.45fbd31 | Andreas Tille,Olivier Sallou,Tim Booth | Andreas Tille | 2018-09-26 08:35:30+00</span>
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<pre style="margin: 0;">-<span id="LC36" class="line" lang="plaintext"> metaphlan2 | 2.9.22 | 2.96.1 | Andreas Tille | Andreas Tille | 2019-11-08 07:19:11+00</span>
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<pre style="margin: 0;">-<span id="LC37" class="line" lang="plaintext"> mummer | 3.23 | 4.0.0~beta2 | Andreas Tille,Charles Plessy,Steffen Moeller | Andreas Tille | 2018-06-11 07:19:31+00</span>
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<pre style="margin: 0;">-<span id="LC38" class="line" lang="plaintext"> nanopolish | 0.11.3 | 0.12.2 | Andreas Tille | Steffen Moeller | 2019-12-22 12:49:21+00</span>
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<pre style="margin: 0;">-<span id="LC39" class="line" lang="plaintext"> ncbi-blast+ | 2.9.0 | 2.10.0 | Aaron M. Ucko,Andreas Tille,Olivier Sallou | Aaron M. Ucko | 2020-02-17 01:50:53+00</span>
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<pre style="margin: 0;">-<span id="LC40" class="line" lang="plaintext"> ncbi-vdb | 2.10.3 | 2.10.4 | Andreas Tille | Andreas Tille | 2020-02-24 21:12:17+00</span>
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<pre style="margin: 0;">-<span id="LC41" class="line" lang="plaintext"> nibabel | 3.0.1 | 3.0.2 | Michael Hanke,Yaroslav Halchenko | Andreas Tille | 2020-03-03 14:58:34+00</span>
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<pre style="margin: 0;">-<span id="LC42" class="line" lang="plaintext"> plink2 | 2.00~a3-200217 | 200321 | Dylan Aïssi | Dylan Aïssi | 2020-02-19 06:19:18+00</span>
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<pre style="margin: 0;">-<span id="LC43" class="line" lang="plaintext"> pynn | 0.7.5 | 0.9.5 | Michael Hanke,Yaroslav Halchenko | Andreas Tille | 2020-03-20 11:00:12+00</span>
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<pre style="margin: 0;">-<span id="LC44" class="line" lang="plaintext"> python-bids-validator | 1.2.4 | 1.4.4 | Yaroslav Halchenko | Yaroslav Halchenko | 2019-08-17 19:00:11+00</span>
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<pre style="margin: 0;">-<span id="LC45" class="line" lang="plaintext"> python-colormap | 1.0.2 | 1.0.3 | Andreas Tille | Andreas Tille | 2019-12-06 16:51:43+00</span>
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<pre style="margin: 0;">-<span id="LC46" class="line" lang="plaintext"> python-schema-salad | 5.0.20200220195218 | 5.0.20200302192450 | Michael R. Crusoe | Michael R. Crusoe | 2020-02-27 19:19:53+00</span>
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<pre style="margin: 0;">-<span id="LC47" class="line" lang="plaintext"> q2-demux | 2019.10.0 | 2020.2.0 | Liubov Chuprikova | Liubov Chuprikova | 2020-01-26 07:34:40+00</span>
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<pre style="margin: 0;">-<span id="LC48" class="line" lang="plaintext"> q2-metadata | 2019.10.0 | 2020.2.0 | Liubov Chuprikova | Andreas Tille | 2020-02-03 08:42:28+00</span>
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<pre style="margin: 0;">-<span id="LC49" class="line" lang="plaintext"> q2-types | 2019.10.0 | 2020.2.0 | Liubov Chuprikova | Liubov Chuprikova | 2019-12-23 20:39:42+00</span>
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<pre style="margin: 0;">-<span id="LC50" class="line" lang="plaintext"> qiime | 2019.10.0 | 2020.2.0 | Andreas Tille,Liubov Chuprikova,Steffen Moeller | Liubov Chuprikova | 2019-12-16 09:51:27+00</span>
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<pre style="margin: 0;">-<span id="LC51" class="line" lang="plaintext"> relion | 1.4 | 3.0.8 | Andreas Tille,Goswin von Brederlow,Navid Fehrenbacher,Roland Fehrenbacher | Andreas Tille | 2018-06-14 12:49:40+00</span>
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<pre style="margin: 0;">-<span id="LC52" class="line" lang="plaintext"> resfinder-db | 0.0+git20191001.149209d | 0.0+git20200318.d6f36d3 | Andreas Tille | Andreas Tille | 2019-11-16 23:00:12+00</span>
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<pre style="margin: 0;">-<span id="LC53" class="line" lang="plaintext"> salmon | 0.12.0 | 1.1.0 | Kevin Murray,Michael R. Crusoe | Andreas Tille | 2018-12-13 19:05:56+00</span>
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<pre style="margin: 0;">-<span id="LC54" class="line" lang="plaintext"> seaview | 4.7 | 5.0.1 | Andreas Tille,Charles Plessy | Andreas Tille | 2018-05-09 13:43:40+00</span>
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<pre style="margin: 0;">-<span id="LC55" class="line" lang="plaintext"> skesa | 2.3.0 | 2.4.0 | Andreas Tille | Andreas Tille | 2019-08-20 14:49:33+00</span>
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<pre style="margin: 0;">-<span id="LC56" class="line" lang="plaintext"> sra-sdk | 2.9.3 | 2.10.4 | Andreas Tille,Charles Plessy | Steffen Moeller | 2018-10-23 20:40:02+00</span>
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<pre style="margin: 0;">-<span id="LC57" class="line" lang="plaintext"> stacks | 2.41 | 2.52 | Andreas Tille,Tim Booth | Andreas Tille | 2019-07-12 19:11:30+00</span>
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<pre style="margin: 0;">-<span id="LC58" class="line" lang="plaintext"> sumatra | 1.0.31 | 1.0.34 | Andreas Tille,Tim Booth | Andreas Tille | 2018-10-16 10:06:33+00</span>
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<pre style="margin: 0;">-<span id="LC59" class="line" lang="plaintext"> t-coffee | 12.00.7fb08c2 | 13.41.0.28bdc39 | Andreas Tille,Steffen Moeller | Andreas Tille | 2019-02-15 07:57:10+00</span>
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<pre style="margin: 0;">-<span id="LC60" class="line" lang="plaintext"> tnseq-transit | 3.0.2 | 3.1.0 | Andreas Tille | Steffen Moeller | 2020-01-18 22:25:05+00</span>
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<pre style="margin: 0;">-<span id="LC61" class="line" lang="plaintext"> xmedcon | 0.16.1 | 0.16.2 | Andreas Tille,Roland Marcus Rutschmann | Andreas Tille | 2019-01-25 18:23:59+00</span>
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<pre style="margin: 0;">-<span id="LC62" class="line" lang="plaintext">(57 rows)</span>
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<pre style="margin: 0;">+<span id="LC3" class="line" lang="plaintext"> source | version | upstream_version | uploaders | Last uploader | Last uploaded </span>
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<pre style="margin: 0;">+<span id="LC4" class="line" lang="plaintext">-------------------------------+---------------------------------+---------------------------------+-----------------------------------------------------------------------------+----------------------+------------------------</span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext"> artemis | 17.0.1 | 18.1.0 | Andreas Tille | Andreas Tille | 2019-02-08 11:19:24+00</span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"> baitfisher | 1.2.7+git20180107.e92dbf2 | 1.2.7+git20190123.241d060 | Olivier Sallou | Andreas Tille | 2018-09-24 13:04:18+00</span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"> beagle | 5.1-191125 | 200321 | Dylan Aïssi | Dylan Aïssi | 2019-12-14 18:34:10+00</span>
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8
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext"> biobambam2 | 2.0.153 | 2.0.159+ds | Andreas Tille | Andreas Tille | 2020-02-05 13:20:41+00</span>
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9
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<pre style="margin: 0;">+<span id="LC9" class="line" lang="plaintext"> biomaj3 | 3.1.14 | 3.1.16 | Olivier Sallou | Olivier Sallou | 2020-02-08 18:22:42+00</span>
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10
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="plaintext"> biosig4c++ | 1.9.5 | 2.0.2 | Michael Hanke,Yaroslav Halchenko | Andreas Tille | 2020-03-02 08:38:37+00</span>
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11
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="plaintext"> ctdopts | 1.2 | 1.3 | Michael R. Crusoe | Michael R. Crusoe | 2018-02-28 12:34:26+00</span>
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12
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<pre style="margin: 0;">+<span id="LC12" class="line" lang="plaintext"> cwltool | 2.0.20200224214940 | 3.0.20200317203547 | Michael R. Crusoe | Michael R. Crusoe | 2020-02-26 12:07:54+00</span>
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13
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="plaintext"> dazzdb | 1.0+git20200115.d8adde7 | 1.0+git20200322.ba88d76 | Andreas Tille | Andreas Tille | 2020-01-23 16:34:35+00</span>
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14
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="plaintext"> dcm2niix | 1.0.20181125 | 1.0.20190902 | Ghislain Antony Vaillant | Andreas Tille | 2019-01-30 10:04:52+00</span>
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15
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="plaintext"> ea-utils | 1.1.2 | 1.04.807 | Andreas Tille,Tim Booth | Andreas Tille | 2018-04-26 21:48:01+00</span>
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16
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="plaintext"> edfbrowser | 1.72 | 1.73 | Andreas Tille | Andreas Tille | 2020-02-14 15:02:37+00</span>
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17
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<pre style="margin: 0;">+<span id="LC17" class="line" lang="plaintext"> elastix | 4.9.0 | 5.0.0 | Gert Wollny,Steve M. Robbins | Andreas Tille | 2019-01-15 11:50:11+00</span>
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18
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="plaintext"> falcon | 1.8.8 | 2.1.4 | Afif Elghraoui | Afif Elghraoui | 2017-12-16 08:49:13+00</span>
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19
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="plaintext"> fis-gtm | 6.3-007 | 6.3-010 | Amul Shah,Andreas Tille | Amul Shah | 2019-02-28 14:12:19+00</span>
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20
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="plaintext"> gatb-core | 1.4.1+git20191209.9398f28 | 1.4.1+git20200118.1dc23ff | Andreas Tille,Nadiya Sitdykova | Michael R. Crusoe | 2020-02-17 14:52:30+00</span>
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21
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<pre style="margin: 0;">+<span id="LC21" class="line" lang="plaintext"> gdcm | 3.0.4 | 3.0.5 | Gert Wollny,Sébastien Jodogne,Steve M. Robbins | Gert Wollny | 2019-11-07 11:49:02+00</span>
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22
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<pre style="margin: 0;">+<span id="LC22" class="line" lang="plaintext"> gmap | 2019-09-12 | 2020-03-12 | Alexandre Mestiashvili,Andreas Tille,Shaun Jackman | Steffen Moeller | 2019-12-30 12:37:15+00</span>
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<pre style="margin: 0;">+<span id="LC23" class="line" lang="plaintext"> hdmf | 1.5.4 | 1.6.1 | Yaroslav Halchenko | Yaroslav Halchenko | 2020-02-03 03:01:25+00</span>
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<pre style="margin: 0;">+<span id="LC24" class="line" lang="plaintext"> hyphy | 2.5.1 | 2.5.7 | Andreas Tille | Andreas Tille | 2020-01-07 21:19:50+00</span>
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<pre style="margin: 0;">+<span id="LC25" class="line" lang="plaintext"> igdiscover | 0.11 | 0.12.2 | Steffen Moeller | Andreas Tille | 2019-09-06 07:04:02+00</span>
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<pre style="margin: 0;">+<span id="LC26" class="line" lang="plaintext"> imagej | 1.52r | 1.52u | David Miguel Susano Pinto | Andreas Tille | 2019-12-04 14:55:11+00</span>
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27
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<pre style="margin: 0;">+<span id="LC27" class="line" lang="plaintext"> ismrmrd | 1.4.0 | 1.4.1 | Ghislain Antony Vaillant | Andreas Tille | 2019-01-26 07:49:20+00</span>
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28
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<pre style="margin: 0;">+<span id="LC28" class="line" lang="plaintext"> jebl2 | 0.1+git20180418.653eb83 | 0.1+git20190308.a98448e | Andreas Tille | Andreas Tille | 2018-07-05 12:05:57+00</span>
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29
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<pre style="margin: 0;">+<span id="LC29" class="line" lang="plaintext"> kallisto | 0.46.1 | 0.46.2 | Andreas Tille | Michael R. Crusoe | 2019-12-27 07:19:20+00</span>
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<pre style="margin: 0;">+<span id="LC30" class="line" lang="plaintext"> kineticstools | 0.6.1+git20180425.27a1878 | 0.6.1+git20190618.0ac41a0 | Andreas Tille | Andreas Tille | 2019-02-14 13:26:09+00</span>
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<pre style="margin: 0;">+<span id="LC31" class="line" lang="plaintext"> king-probe | 2.16.160404+git20180613.a09b012 | 2.16.160404+git20200121.9b198c1 | Andreas Tille,Malihe Asemani,Michael Prisant | Andreas Tille | 2018-07-16 07:34:48+00</span>
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<pre style="margin: 0;">+<span id="LC32" class="line" lang="plaintext"> last-align | 1047 | 1060 | Andreas Tille,Charles Plessy | Michael R. Crusoe | 2020-01-24 15:34:18+00</span>
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<pre style="margin: 0;">+<span id="LC33" class="line" lang="plaintext"> libbioparser-dev | 2.0.1 | 2.1.2 | Andreas Tille | Andreas Tille | 2019-07-15 13:35:45+00</span>
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<pre style="margin: 0;">+<span id="LC34" class="line" lang="plaintext"> libedlib | 1.2.4 | 1.2.6 | Andreas Tille | Andreas Tille | 2019-08-19 00:34:56+00</span>
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<pre style="margin: 0;">+<span id="LC35" class="line" lang="plaintext"> libjloda-java | 0.0+git20180523.cbaf6d1 | 0.0+git20200318.6fef1b7 | Andreas Tille | Andreas Tille | 2018-05-25 21:49:43+00</span>
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<pre style="margin: 0;">+<span id="LC36" class="line" lang="plaintext"> libsis-base-java | 18.09~pre1+git20180827.fe4953e | 18.09~pre1+git20180928.45fbd31 | Andreas Tille,Olivier Sallou,Tim Booth | Andreas Tille | 2018-09-26 08:35:30+00</span>
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<pre style="margin: 0;">+<span id="LC37" class="line" lang="plaintext"> libthread-pool | 2.0.1 | 2.0.2 | Andreas Tille | Andreas Tille | 2019-11-19 21:21:23+00</span>
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<pre style="margin: 0;">+<span id="LC38" class="line" lang="plaintext"> metaphlan2 | 2.9.22 | 2.96.1 | Andreas Tille | Andreas Tille | 2019-11-08 07:19:11+00</span>
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<pre style="margin: 0;">+<span id="LC39" class="line" lang="plaintext"> ncbi-blast+ | 2.9.0 | 2.10.0 | Aaron M. Ucko,Andreas Tille,Olivier Sallou | Aaron M. Ucko | 2020-02-17 01:50:53+00</span>
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<pre style="margin: 0;">+<span id="LC40" class="line" lang="plaintext"> ncbi-vdb | 2.10.3 | 2.10.4 | Andreas Tille | Andreas Tille | 2020-02-24 21:12:17+00</span>
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<pre style="margin: 0;">+<span id="LC41" class="line" lang="plaintext"> nibabel | 3.0.1 | 3.0.2 | Michael Hanke,Yaroslav Halchenko | Andreas Tille | 2020-03-03 14:58:34+00</span>
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<pre style="margin: 0;">+<span id="LC42" class="line" lang="plaintext"> picard-tools | 2.18.25 | 2.22.1 | Andreas Tille,Charles Plessy,Olivier Sallou,Steffen Moeller,Vincent Danjean | Andreas Tille | 2019-02-04 09:20:37+00</span>
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<pre style="margin: 0;">+<span id="LC43" class="line" lang="plaintext"> plink2 | 2.00~a3-200217 | 200321 | Dylan Aïssi | Dylan Aïssi | 2020-02-19 06:19:18+00</span>
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<pre style="margin: 0;">+<span id="LC44" class="line" lang="plaintext"> pynn | 0.7.5 | 0.9.5 | Michael Hanke,Yaroslav Halchenko | Andreas Tille | 2020-03-20 11:00:12+00</span>
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<pre style="margin: 0;">+<span id="LC45" class="line" lang="plaintext"> python-avro | 1.9.1 | 1.9.2 | Afif Elghraoui | Andreas Tille | 2019-12-18 08:41:55+00</span>
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<pre style="margin: 0;">+<span id="LC46" class="line" lang="plaintext"> python-bids-validator | 1.2.4 | 1.4.4 | Yaroslav Halchenko | Yaroslav Halchenko | 2019-08-17 19:00:11+00</span>
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<pre style="margin: 0;">+<span id="LC47" class="line" lang="plaintext"> python-cobra | 0.14.2 | 0.17.1 | Afif Elghraoui | Liubov Chuprikova | 2019-03-02 06:49:44+00</span>
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<pre style="margin: 0;">+<span id="LC48" class="line" lang="plaintext"> python-colormap | 1.0.2 | 1.0.3 | Andreas Tille | Andreas Tille | 2019-12-06 16:51:43+00</span>
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<pre style="margin: 0;">+<span id="LC49" class="line" lang="plaintext"> python-pymummer | 0.10.3 | 0.11.0 | Afif Elghraoui | Andreas Tille | 2019-01-07 09:06:07+00</span>
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<pre style="margin: 0;">+<span id="LC50" class="line" lang="plaintext"> python-schema-salad | 5.0.20200220195218 | 5.0.20200302192450 | Michael R. Crusoe | Michael R. Crusoe | 2020-02-27 19:19:53+00</span>
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<pre style="margin: 0;">+<span id="LC51" class="line" lang="plaintext"> q2-demux | 2019.10.0 | 2020.2.0 | Liubov Chuprikova | Liubov Chuprikova | 2020-01-26 07:34:40+00</span>
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<pre style="margin: 0;">+<span id="LC52" class="line" lang="plaintext"> q2-metadata | 2019.10.0 | 2020.2.0 | Liubov Chuprikova | Andreas Tille | 2020-02-03 08:42:28+00</span>
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<pre style="margin: 0;">+<span id="LC53" class="line" lang="plaintext"> q2-types | 2019.10.0 | 2020.2.0 | Liubov Chuprikova | Liubov Chuprikova | 2019-12-23 20:39:42+00</span>
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<pre style="margin: 0;">+<span id="LC54" class="line" lang="plaintext"> qiime | 2019.10.0 | 2020.2.0 | Andreas Tille,Liubov Chuprikova,Steffen Moeller | Liubov Chuprikova | 2019-12-16 09:51:27+00</span>
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55
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<pre style="margin: 0;">+<span id="LC55" class="line" lang="plaintext"> racon | 1.4.10 | 1.4.12 | Andreas Tille,Cédric Lood | Michael R. Crusoe | 2019-11-12 17:22:24+00</span>
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<pre style="margin: 0;">+<span id="LC56" class="line" lang="plaintext"> relion | 1.4 | 3.0.8 | Andreas Tille,Goswin von Brederlow,Navid Fehrenbacher,Roland Fehrenbacher | Andreas Tille | 2018-06-14 12:49:40+00</span>
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<pre style="margin: 0;">+<span id="LC57" class="line" lang="plaintext"> resfinder-db | 0.0+git20191001.149209d | 0.0+git20200318.d6f36d3 | Andreas Tille | Andreas Tille | 2019-11-16 23:00:12+00</span>
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<pre style="margin: 0;">+<span id="LC58" class="line" lang="plaintext"> salmon | 0.12.0 | 1.1.0 | Kevin Murray,Michael R. Crusoe | Andreas Tille | 2018-12-13 19:05:56+00</span>
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<pre style="margin: 0;">+<span id="LC59" class="line" lang="plaintext"> scrm | 1.7.3 | 1.7.4 | Kevin Murray | Andreas Tille | 2018-12-17 13:05:34+00</span>
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<pre style="margin: 0;">+<span id="LC60" class="line" lang="plaintext"> seaview | 4.7 | 5.0.2 | Andreas Tille,Charles Plessy | Andreas Tille | 2018-05-09 13:43:40+00</span>
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<pre style="margin: 0;">+<span id="LC61" class="line" lang="plaintext"> stacks | 2.41 | 2.52 | Andreas Tille,Tim Booth | Andreas Tille | 2019-07-12 19:11:30+00</span>
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<pre style="margin: 0;">+<span id="LC62" class="line" lang="plaintext"> sumatra | 1.0.31 | 1.0.34 | Andreas Tille,Tim Booth | Andreas Tille | 2018-10-16 10:06:33+00</span>
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<pre style="margin: 0;">+<span id="LC63" class="line" lang="plaintext"> t-coffee | 12.00.7fb08c2 | 13.41.0.28bdc39 | Andreas Tille,Steffen Moeller | Andreas Tille | 2019-02-15 07:57:10+00</span>
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<pre style="margin: 0;">+<span id="LC64" class="line" lang="plaintext"> xmedcon | 0.16.1 | 0.16.2 | Andreas Tille,Roland Marcus Rutschmann | Andreas Tille | 2019-01-25 18:23:59+00</span>
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<pre style="margin: 0;">+<span id="LC65" class="line" lang="plaintext">(60 rows)</span>
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<pre style="margin: 0;"> <span id="LC66" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC68" class="line" lang="plaintext"> source | id | severity | title </span>
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