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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/community/helper-scripts">Debian Med / community / helper-scripts</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/cc6056d60896da8c1c07f4f9eacf33d61a2eca6d">cc6056d6</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-03-28T13:44:51+00:00</i>
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<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">automatic update
</pre>
</li>
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<h4>2 changed files:</h4>
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<li class="file-stats">
<a href="#f6d55d24085decec06151dd27f30199089d856ca">
debian-med-tests.txt
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</li>
<li class="file-stats">
<a href="#2654e31016bcee9bbe05d462121706cc8ed368af">
outdated_med-packages.txt
</a>
</li>
</ul>
<h4>Changes:</h4>
<li id="f6d55d24085decec06151dd27f30199089d856ca">
<a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/cc6056d60896da8c1c07f4f9eacf33d61a2eca6d#f6d55d24085decec06151dd27f30199089d856ca"><strong>debian-med-tests.txt</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">Last-Update: Sat, 28 Mar 2020 <span class="idiff left right">01:42:03</span> +0000</span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">Last-Update: Sat, 28 Mar 2020 <span class="idiff left right">13:42:04</span> +0000</span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext"> Source | Vote | Tasks | Tags </span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext">-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------</span>
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="plaintext"> dcmtk | 165 | {imaging,covid-19} | </span>
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="plaintext"> orthanc | 99 | {practice,covid-19,imaging} | </span>
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<pre style="margin: 0;">-<span id="LC7" class="line" lang="plaintext"> gdcm | 48 | {imaging-dev} | </span>
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<pre style="margin: 0;">-<span id="LC8" class="line" lang="plaintext"> orthanc-wsi | 43 | {practice,imaging,covid-19,his,oncology,laboratory} | </span>
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<pre style="margin: 0;">-<span id="LC9" class="line" lang="plaintext"> htsjdk | 36 | {bio-dev} | </span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext"> dcmtk | 167 | {imaging,covid-19} | </span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"> orthanc | 97 | {imaging,practice,covid-19} | </span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"> gdcm | 49 | {imaging-dev} | </span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext"> orthanc-wsi | 42 | {his,imaging,laboratory,covid-19,practice,oncology} | </span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext"> amide | 35 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="plaintext"> htsjdk | 34 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC11" class="line" lang="plaintext"> dcm2niix | 31 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="plaintext"> dicomscope | 28 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC13" class="line" lang="plaintext"> dicom3tools | 26 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="plaintext"> gdcm | 21 | {covid-19,imaging} | </span>
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<pre style="margin: 0;">+<span id="LC15" class="line" lang="plaintext"> minc-tools | 19 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="plaintext"> pixelmed | 19 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC17" class="line" lang="plaintext"> gnumed-server | 18 | {covid-19,practice} | </span>
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<pre style="margin: 0;">-<span id="LC15" class="line" lang="plaintext"> pixelmed | 18 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC16" class="line" lang="plaintext"> gdcm | 17 | {covid-19,imaging} | </span>
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<pre style="margin: 0;">-<span id="LC17" class="line" lang="plaintext"> minc-tools | 17 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC18" class="line" lang="plaintext"> invesalius | 16 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC19" class="line" lang="plaintext"> ngs-sdk | 16 | {bio-dev} | </span>
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<pre style="margin: 0;">-<span id="LC20" class="line" lang="plaintext"> openslide | 15 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC18" class="line" lang="plaintext"> ngs-sdk | 17 | {bio-dev} | </span>
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="plaintext"> openslide | 16 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="plaintext"> invesalius | 15 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC21" class="line" lang="plaintext"> vtk-dicom | 15 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC22" class="line" lang="plaintext"> biojava-live | 14 | {bio-dev} | </span>
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<pre style="margin: 0;">+<span id="LC23" class="line" lang="plaintext"> king | 14 | {imaging,typesetting} | </span>
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<pre style="margin: 0;"> <span id="LC24" class="line" lang="plaintext"> ncbi-entrez-direct | 14 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC23" class="line" lang="plaintext"> vtk-dicom | 14 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC25" class="line" lang="plaintext"> adun.app | 13 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC25" class="line" lang="plaintext"> <span class="idiff left right">king | 13 | {imaging,typesetting}</span> | </span>
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<pre style="margin: 0;">+<span id="LC26" class="line" lang="plaintext"> <span class="idiff left right">insighttoolkit4 | 13 | {imaging-dev} </span> | </span>
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<pre style="margin: 0;"> <span id="LC27" class="line" lang="plaintext"> cgview | 12 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC27" class="line" lang="plaintext"> insighttoolkit4 | 12 | {imaging-dev} | </span>
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<pre style="margin: 0;">+<span id="LC28" class="line" lang="plaintext"> mia | 12 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC29" class="line" lang="plaintext"> psychopy | 12 | {psychology} | </span>
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<pre style="margin: 0;"> <span id="LC30" class="line" lang="plaintext"> ea-utils | 11 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC29" class="line" lang="plaintext"> mia | 11 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC30" class="line" lang="plaintext"> psychopy | 11 | {psychology,covid-19} | </span>
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<pre style="margin: 0;">+<span id="LC31" class="line" lang="plaintext"> jebl2 | 11 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC32" class="line" lang="plaintext"> radiant | 11 | {bio} | </span>
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<pre style="margin: 0;">+<span id="LC33" class="line" lang="plaintext"> biosig4c++ | 10 | {physics,imaging} | </span>
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<pre style="margin: 0;"> <span id="LC34" class="line" lang="plaintext"> dazzdb | 10 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC33" class="line" lang="plaintext"> diamond-aligner | 10 | {bio,covid-19} | </span>
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<pre style="margin: 0;">-<span id="LC34" class="line" lang="plaintext"> jebl2 | 10 | {bio-dev} | </span>
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<pre style="margin: 0;">+<span id="LC35" class="line" lang="plaintext"> diamond-aligner | 10 | {covid-19,bio} | </span>
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<pre style="margin: 0;"> <span id="LC36" class="line" lang="plaintext"> king-probe | 10 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC37" class="line" lang="plaintext"> librg-utils-perl | 10 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC38" class="line" lang="plaintext"> norsp | 10 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC39" class="line" lang="plaintext"> obitools | 10 | {bio} | </span>
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<pre style="margin: 0;">+<span id="LC40" class="line" lang="plaintext"> plastimatch | 10 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC41" class="line" lang="plaintext"> staden | 10 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC40" class="line" lang="plaintext"> tree-puzzle | 10 | {cloud,bio-phylogeny,bio} | </span>
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<pre style="margin: 0;">-<span id="LC41" class="line" lang="plaintext"> biosig4c++ | 9 | {covid-19,imaging,physics} | </span>
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<pre style="margin: 0;">+<span id="LC42" class="line" lang="plaintext"> tree-puzzle | 10 | {bio,cloud,bio-phylogeny} | </span>
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<pre style="margin: 0;"> <span id="LC43" class="line" lang="plaintext"> bppsuite | 9 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC43" class="line" lang="plaintext"> fastlink | 9 | {<span class="idiff left right">cloud,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC44" class="line" lang="plaintext"> fastlink | 9 | {<span class="idiff left right">bio,cloud</span>} | </span>
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<pre style="margin: 0;"> <span id="LC45" class="line" lang="plaintext"> gdcm | 9 | {imaging-dev} | </span>
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<pre style="margin: 0;">-<span id="LC45" class="line" lang="plaintext"> mipe | 9 | {<span class="idiff left right">cloud,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC46" class="line" lang="plaintext"> mipe | 9 | {<span class="idiff left right">bio,cloud</span>} | </span>
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<pre style="margin: 0;"> <span id="LC47" class="line" lang="plaintext"> ncbi-seg | 9 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC48" class="line" lang="plaintext"> ngs-sdk | 9 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC49" class="line" lang="plaintext"> phast | 9 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC49" class="line" lang="plaintext"> plastimatch | 9 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC50" class="line" lang="plaintext"> prime-phylo | 9 | {cloud,bio} | </span>
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<pre style="margin: 0;">+<span id="LC50" class="line" lang="plaintext"> prime-phylo | 9 | {bio,cloud} | </span>
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<pre style="margin: 0;"> <span id="LC51" class="line" lang="plaintext"> abacas | 8 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC52" class="line" lang="plaintext"> ampliconnoise | 8 | {<span class="idiff left right">bio,cloud</span>} | </span>
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<pre style="margin: 0;">-<span id="LC53" class="line" lang="plaintext"> anfo | 8 | {<span class="idiff left right">cloud,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC52" class="line" lang="plaintext"> ampliconnoise | 8 | {<span class="idiff left right">cloud,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC53" class="line" lang="plaintext"> anfo | 8 | {<span class="idiff left right">bio,cloud</span>} | </span>
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<pre style="margin: 0;"> <span id="LC54" class="line" lang="plaintext"> arden | 8 | {bio,cloud} | </span>
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<pre style="margin: 0;"> <span id="LC55" class="line" lang="plaintext"> biomaj3-cli | 8 | {cloud} | </span>
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<pre style="margin: 0;"> <span id="LC56" class="line" lang="plaintext"> daligner | 8 | {bio-ngs,bio} | </span>
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<pre style="margin: 0;"> <span id="LC57" class="line" lang="plaintext"> ecopcr | 8 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC58" class="line" lang="plaintext"> embassy-domainatrix | 8 | {<span class="idiff left right">cloud,bio</span>} | </span>
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<pre style="margin: 0;">-<span id="LC59" class="line" lang="plaintext"> freecontact | 8 | {<span class="idiff left right">cloud,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC58" class="line" lang="plaintext"> embassy-domainatrix | 8 | {<span class="idiff left right">bio,cloud</span>} | </span>
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<pre style="margin: 0;">+<span id="LC59" class="line" lang="plaintext"> freecontact | 8 | {<span class="idiff left right">bio,cloud</span>} | </span>
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<pre style="margin: 0;"> <span id="LC60" class="line" lang="plaintext"> hunspell-en-med | 8 | {tools} | </span>
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<pre style="margin: 0;">+<span id="LC61" class="line" lang="plaintext"> jaligner | 8 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC62" class="line" lang="plaintext"> maqview | 8 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC63" class="line" lang="plaintext"> melting | 8 | {cloud,bio} | </span>
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<pre style="margin: 0;"> <span id="LC64" class="line" lang="plaintext"> neobio | 8 | {bio,cloud} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -66,29 +67,28 @@ Last-Update: Sat, 28 Mar 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC67" class="line" lang="plaintext"> piler | 8 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC68" class="line" lang="plaintext"> pscan-tfbs | 8 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC69" class="line" lang="plaintext"> seqsero | 8 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC69" class="line" lang="plaintext"> sigma-align | 8 | {bio<span class="idiff left right">-phylogeny,cloud,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC70" class="line" lang="plaintext"> sigma-align | 8 | {bio<span class="idiff left right">,cloud,bio-phylogeny</span>} | </span>
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<pre style="margin: 0;"> <span id="LC71" class="line" lang="plaintext"> bio-tradis | 7 | {bio-dev,bio} | </span>
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<pre style="margin: 0;"> <span id="LC72" class="line" lang="plaintext"> bitseq | 7 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC73" class="line" lang="plaintext"> codonw | 7 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC74" class="line" lang="plaintext"> edtsurf | 7 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC74" class="line" lang="plaintext"> embassy-domalign | 7 | {<span class="idiff left right">bio,cloud</span>} | </span>
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<pre style="margin: 0;">-<span id="LC75" class="line" lang="plaintext"> embassy-domsearch | 7 | {<span class="idiff left right">cloud,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC75" class="line" lang="plaintext"> embassy-domalign | 7 | {<span class="idiff left right">cloud,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC76" class="line" lang="plaintext"> embassy-domsearch | 7 | {<span class="idiff left right">bio,cloud</span>} | </span>
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<pre style="margin: 0;"> <span id="LC77" class="line" lang="plaintext"> estscan | 7 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC77" class="line" lang="plaintext"> fitgcp | 7 | {<span class="idiff left right">cloud,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC78" class="line" lang="plaintext"> fitgcp | 7 | {<span class="idiff left right">bio,cloud</span>} | </span>
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<pre style="margin: 0;"> <span id="LC79" class="line" lang="plaintext"> freebayes | 7 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC80" class="line" lang="plaintext"> gasic | 7 | {cloud,bio} | </span>
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<pre style="margin: 0;">-<span id="LC80" class="line" lang="plaintext"> jaligner | 7 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC81" class="line" lang="plaintext"> lagan | 7 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC82" class="line" lang="plaintext"> lamarc | 7 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC83" class="line" lang="plaintext"> lucy | 7 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC84" class="line" lang="plaintext"> mauve-aligner | 7 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC85" class="line" lang="plaintext"> microbegps | 7 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC86" class="line" lang="plaintext"> paraclu | 7 | {cloud,bio} | </span>
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<pre style="margin: 0;">-<span id="LC87" class="line" lang="plaintext"> perm | 7 | {<span class="idiff left right">bio,cloud</span>} | </span>
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<pre style="margin: 0;">+<span id="LC87" class="line" lang="plaintext"> perm | 7 | {<span class="idiff left right">cloud,bio</span>} | </span>
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<pre style="margin: 0;"> <span id="LC88" class="line" lang="plaintext"> placnet | 7 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC89" class="line" lang="plaintext"> poretools | 7 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC90" class="line" lang="plaintext"> predictprotein | 7 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC91" class="line" lang="plaintext"> probabel | 7 | {<span class="idiff left right">bio,cloud</span>} | </span>
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<pre style="margin: 0;">+<span id="LC91" class="line" lang="plaintext"> probabel | 7 | {<span class="idiff left right">cloud,bio</span>} | </span>
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<pre style="margin: 0;"> <span id="LC92" class="line" lang="plaintext"> saint | 7 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC93" class="line" lang="plaintext"> seqtools | 7 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC94" class="line" lang="plaintext"> sibsim4 | 7 | {cloud,bio} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -117,6 +117,7 @@ Last-Update: Sat, 28 Mar 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC117" class="line" lang="plaintext"> mlv-smile | 6 | {cloud,bio} | </span>
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118
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<pre style="margin: 0;"> <span id="LC118" class="line" lang="plaintext"> murasaki | 6 | {bio} | </span>
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119
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<pre style="margin: 0;"> <span id="LC119" class="line" lang="plaintext"> orthanc-webviewer | 6 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC120" class="line" lang="plaintext"> parsnp | 6 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC121" class="line" lang="plaintext"> proalign | 6 | {bio-phylogeny,bio} | </span>
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<pre style="margin: 0;"> <span id="LC122" class="line" lang="plaintext"> pscan-chip | 6 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC123" class="line" lang="plaintext"> quorum | 6 | {bio} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -129,17 +130,16 @@ Last-Update: Sat, 28 Mar 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC130" class="line" lang="plaintext"> sickle | 6 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC131" class="line" lang="plaintext"> sprai | 6 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC132" class="line" lang="plaintext"> spread-phy | 6 | {bio,bio-phylogeny} | </span>
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<pre style="margin: 0;">-<span id="LC132" class="line" lang="plaintext"> squizz | 6 | {<span class="idiff left right">bio,cloud</span>} | </span>
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<pre style="margin: 0;">+<span id="LC133" class="line" lang="plaintext"> squizz | 6 | {<span class="idiff left right">cloud,bio</span>} | </span>
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<pre style="margin: 0;"> <span id="LC134" class="line" lang="plaintext"> transtermhp | 6 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC135" class="line" lang="plaintext"> treeview | 6 | {bio-phylogeny,bio} | </span>
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<pre style="margin: 0;"> <span id="LC136" class="line" lang="plaintext"> vsearch | 6 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC136" class="line" lang="plaintext"> zalign | 6 | {<span class="idiff left right">bio,cloud</span>} | </span>
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<pre style="margin: 0;">+<span id="LC137" class="line" lang="plaintext"> zalign | 6 | {<span class="idiff left right">cloud,bio</span>} | </span>
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<pre style="margin: 0;"> <span id="LC138" class="line" lang="plaintext"> assemblytics | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC139" class="line" lang="plaintext"> bandage | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC140" class="line" lang="plaintext"> beast-mcmc | 5 | {bio-phylogeny,bio} | </span>
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<pre style="margin: 0;"> <span id="LC141" class="line" lang="plaintext"> cluster3 | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC142" class="line" lang="plaintext"> dwgsim | 5 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC142" class="line" lang="plaintext"> elastix | 5 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC143" class="line" lang="plaintext"> fastml | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC144" class="line" lang="plaintext"> ghmm | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC145" class="line" lang="plaintext"> hinge | 5 | {bio} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -152,17 +152,17 @@ Last-Update: Sat, 28 Mar 2020 01:42:03 +0000</td>
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152
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<pre style="margin: 0;"> <span id="LC152" class="line" lang="plaintext"> mhap | 5 | {bio,bio-ngs} | </span>
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<pre style="margin: 0;"> <span id="LC153" class="line" lang="plaintext"> mptp | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC154" class="line" lang="plaintext"> openslide | 5 | {imaging-dev} | </span>
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<pre style="margin: 0;">-<span id="LC155" class="line" lang="plaintext"> parsnp | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC155" class="line" lang="plaintext"> patman | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC156" class="line" lang="plaintext"> phipack | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC157" class="line" lang="plaintext"> pymia | 5 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC158" class="line" lang="plaintext"> rdp-classifier | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC159" class="line" lang="plaintext"> sumatra | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC160" class="line" lang="plaintext"> tvc | 5 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC162" class="line" lang="plaintext"> blasr | 4 | {bio<span class="idiff left right">,bio-ngs</span>} | </span>
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<pre style="margin: 0;">-<span id="LC163" class="line" lang="plaintext"> delly | 4 | {<span class="idiff left right">bio,covid-19</span>} | </span>
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<pre style="margin: 0;">+<span id="LC161" class="line" lang="plaintext"> blasr | 4 | {bio<span class="idiff left right">-ngs,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC162" class="line" lang="plaintext"> delly | 4 | {<span class="idiff left right">covid-19,bio</span>} | </span>
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<pre style="margin: 0;"> <span id="LC163" class="line" lang="plaintext"> dicompyler | 4 | {oncology} | </span>
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<pre style="margin: 0;"> <span id="LC164" class="line" lang="plaintext"> dindel | 4 | {bio} | </span>
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<pre style="margin: 0;">+<span id="LC165" class="line" lang="plaintext"> elastix | 4 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC166" class="line" lang="plaintext"> fsm-lite | 4 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC167" class="line" lang="plaintext"> libdivsufsort | 4 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC168" class="line" lang="plaintext"> libsbml | 4 | {bio-dev} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -171,7 +171,7 @@ Last-Update: Sat, 28 Mar 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC171" class="line" lang="plaintext"> phybin | 4 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC172" class="line" lang="plaintext"> pilon | 4 | {bio} | </span>
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173
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<pre style="margin: 0;"> <span id="LC173" class="line" lang="plaintext"> plasmidseeker | 4 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC174" class="line" lang="plaintext"> prottest | 4 | {bio<span class="idiff left right">-phylogeny,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC174" class="line" lang="plaintext"> prottest | 4 | {bio<span class="idiff left right">,bio-phylogeny</span>} | </span>
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175
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<pre style="margin: 0;"> <span id="LC175" class="line" lang="plaintext"> rampler | 4 | {bio} | </span>
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176
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<pre style="margin: 0;"> <span id="LC176" class="line" lang="plaintext"> rdp-alignment | 4 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC177" class="line" lang="plaintext"> relion | 4 | {bio} | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="180" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="180" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -180,7 +180,6 @@ Last-Update: Sat, 28 Mar 2020 01:42:03 +0000</td>
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180
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<pre style="margin: 0;"> <span id="LC180" class="line" lang="plaintext"> salmon | 4 | {bio} | </span>
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181
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<pre style="margin: 0;"> <span id="LC181" class="line" lang="plaintext"> samblaster | 4 | {bio,covid-19} | </span>
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<pre style="margin: 0;"> <span id="LC182" class="line" lang="plaintext"> sga | 4 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC183" class="line" lang="plaintext"> soapaligner | 4 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC183" class="line" lang="plaintext"> soapsnp | 4 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC184" class="line" lang="plaintext"> sweed | 4 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC185" class="line" lang="plaintext"> transrate-tools | 4 | {bio} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -188,26 +187,28 @@ Last-Update: Sat, 28 Mar 2020 01:42:03 +0000</td>
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187
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<pre style="margin: 0;"> <span id="LC187" class="line" lang="plaintext"> yaha | 4 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC188" class="line" lang="plaintext"> bart-view | 3 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC189" class="line" lang="plaintext"> igor | 3 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC191" class="line" lang="plaintext"> libgff | 3 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC190" class="line" lang="plaintext"> mrs | 3 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC193" class="line" lang="plaintext"> orthanc-dicomweb | 3 | {<span class="idiff left right">covid-19,imaging</span>} | </span>
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<pre style="margin: 0;">+<span id="LC191" class="line" lang="plaintext"> orthanc-dicomweb | 3 | {<span class="idiff left right">imaging,covid-19</span>} | </span>
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<pre style="margin: 0;"> <span id="LC192" class="line" lang="plaintext"> orthanc-mysql | 3 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC193" class="line" lang="plaintext"> relion | 3 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC196" class="line" lang="plaintext"> rtax | 3 | {<span class="idiff left right">cloud,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC194" class="line" lang="plaintext"> rtax | 3 | {<span class="idiff left right">bio,cloud</span>} | </span>
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197
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195
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<pre style="margin: 0;"> <span id="LC195" class="line" lang="plaintext"> segemehl | 3 | {bio} | </span>
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196
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<pre style="margin: 0;"> <span id="LC196" class="line" lang="plaintext"> seqmagick | 3 | {bio,covid-19} | </span>
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199
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197
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<pre style="margin: 0;"> <span id="LC197" class="line" lang="plaintext"> snap-aligner | 3 | {bio} | </span>
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198
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<pre style="margin: 0;">+<span id="LC198" class="line" lang="plaintext"> soapaligner | 3 | {bio} | </span>
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200
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199
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<pre style="margin: 0;"> <span id="LC199" class="line" lang="plaintext"> stacks | 3 | {bio} | </span>
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201
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200
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<pre style="margin: 0;"> <span id="LC200" class="line" lang="plaintext"> suitename | 3 | {bio} | </span>
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202
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<pre style="margin: 0;">-<span id="LC202" class="line" lang="plaintext"> sumaclust | 3 | {<span class="idiff left right">bio,covid-19</span>} | </span>
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201
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<pre style="margin: 0;">+<span id="LC201" class="line" lang="plaintext"> sumaclust | 3 | {<span class="idiff left right">covid-19,bio</span>} | </span>
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203
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202
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<pre style="margin: 0;"> <span id="LC202" class="line" lang="plaintext"> surankco | 3 | {bio} | </span>
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204
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203
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<pre style="margin: 0;"> <span id="LC203" class="line" lang="plaintext"> tnseq-transit | 3 | {bio,covid-19} | </span>
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205
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204
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<pre style="margin: 0;"> <span id="LC204" class="line" lang="plaintext"> varscan | 3 | {bio} | </span>
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206
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205
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<pre style="margin: 0;"> <span id="LC205" class="line" lang="plaintext"> cufflinks | 2 | {cloud,bio} | </span>
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207
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206
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<pre style="margin: 0;"> <span id="LC206" class="line" lang="plaintext"> getdata | 2 | {bio} | </span>
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208
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<pre style="margin: 0;">-<span id="LC208" class="line" lang="plaintext"> kma | 2 | {<span class="idiff left right">covid-19,bio}</span> | </span>
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207
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<pre style="margin: 0;">+<span id="LC207" class="line" lang="plaintext"> kma | 2 | {<span class="idiff left right">bio} </span> | </span>
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209
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<pre style="margin: 0;"> <span id="LC208" class="line" lang="plaintext"> kmerresistance | 2 | {bio} | </span>
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209
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<pre style="margin: 0;">+<span id="LC209" class="line" lang="plaintext"> libgff | 2 | {bio-dev} | </span>
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210
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210
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<pre style="margin: 0;"> <span id="LC210" class="line" lang="plaintext"> libsmithwaterman | 2 | {bio} | </span>
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<pre style="margin: 0;">+<span id="LC211" class="line" lang="plaintext"> mencal | 2 | {tools} | </span>
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211
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<pre style="margin: 0;"> <span id="LC212" class="line" lang="plaintext"> nanook | 2 | {bio} | </span>
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212
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<pre style="margin: 0;"> <span id="LC213" class="line" lang="plaintext"> qcumber | 2 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC214" class="line" lang="plaintext"> qrisk2 | 2 | {practice} | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="217" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -217,7 +218,7 @@ Last-Update: Sat, 28 Mar 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC218" class="line" lang="plaintext"> spaced | 2 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC219" class="line" lang="plaintext"> srf | 2 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC220" class="line" lang="plaintext"> thesias | 2 | {bio,covid-19} | </span>
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<pre style="margin: 0;">-<span id="LC220" class="line" lang="plaintext"> tree-puzzle | 2 | {<span class="idiff left right">bio,cloud</span>,bio-phylogeny} | </span>
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<pre style="margin: 0;">+<span id="LC221" class="line" lang="plaintext"> tree-puzzle | 2 | {<span class="idiff left right">cloud,bio</span>,bio-phylogeny} | </span>
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<pre style="margin: 0;"> <span id="LC222" class="line" lang="plaintext"> volpack | 2 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC223" class="line" lang="plaintext"> atropos | 1 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC224" class="line" lang="plaintext"> biosig4c++ | 1 | {physics,imaging-dev} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -225,15 +226,13 @@ Last-Update: Sat, 28 Mar 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC226" class="line" lang="plaintext"> blimps | 1 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC227" class="line" lang="plaintext"> ctn | 1 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC228" class="line" lang="plaintext"> edflib | 1 | {imaging-dev} | </span>
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<pre style="margin: 0;">-<span id="LC228" class="line" lang="plaintext"> embassy-phylip | 1 | {<span class="idiff left right">bio,cloud</span>} | </span>
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<pre style="margin: 0;">+<span id="LC229" class="line" lang="plaintext"> embassy-phylip | 1 | {<span class="idiff left right">cloud,bio</span>} | </span>
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<pre style="margin: 0;"> <span id="LC230" class="line" lang="plaintext"> libbio-mage-utils-perl | 1 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC231" class="line" lang="plaintext"> libchado-perl | 1 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC232" class="line" lang="plaintext"> libctapimkt | 1 | {practice} | </span>
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<pre style="margin: 0;">-<span id="LC232" class="line" lang="plaintext"> libhmsbeagle | 1 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC233" class="line" lang="plaintext"> libsmithwaterman | 1 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC234" class="line" lang="plaintext"> libvistaio | 1 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC235" class="line" lang="plaintext"> maxflow | 1 | {imaging-dev} | </span>
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<pre style="margin: 0;">-<span id="LC236" class="line" lang="plaintext"> mencal | 1 | {tools} | </span>
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<pre style="margin: 0;"> <span id="LC236" class="line" lang="plaintext"> ngs-sdk | 1 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC237" class="line" lang="plaintext"> nutsqlite | 1 | {tools} | </span>
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<pre style="margin: 0;"> <span id="LC238" class="line" lang="plaintext"> opencfu | 1 | {laboratory} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -244,20 +243,20 @@ Last-Update: Sat, 28 Mar 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC243" class="line" lang="plaintext"> pilercr | 1 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC244" class="line" lang="plaintext"> ragout | 1 | {bio,covid-19} | </span>
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<pre style="margin: 0;"> <span id="LC245" class="line" lang="plaintext"> sift | 1 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC247" class="line" lang="plaintext"> stringtie | 1 | {<span class="idiff left right">covid-19,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC246" class="line" lang="plaintext"> stringtie | 1 | {<span class="idiff left right">bio,covid-19</span>} | </span>
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<pre style="margin: 0;"> <span id="LC247" class="line" lang="plaintext"> trace2dbest | 1 | {bio} | </span>
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248
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<pre style="margin: 0;"> <span id="LC248" class="line" lang="plaintext"> acedb | 0 | {bio,cloud} | </span>
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<pre style="margin: 0;">-<span id="LC250" class="line" lang="plaintext"> augur | 0 | {<span class="idiff left right">covid-19,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC249" class="line" lang="plaintext"> augur | 0 | {<span class="idiff left right">bio,covid-19</span>} | </span>
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250
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<pre style="margin: 0;"> <span id="LC250" class="line" lang="plaintext"> bambamc | 0 | {bio-dev} | </span>
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251
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<pre style="margin: 0;"> <span id="LC251" class="line" lang="plaintext"> bbmap | 0 | {covid-19} | </span>
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<pre style="margin: 0;">-<span id="LC253" class="line" lang="plaintext"> biobambam2 | 0 | {<span class="idiff left right">bio-dev,bio,covid-19</span>} | </span>
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<pre style="margin: 0;">+<span id="LC252" class="line" lang="plaintext"> biobambam2 | 0 | {<span class="idiff left right">covid-19,bio-dev,bio</span>} | </span>
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253
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<pre style="margin: 0;"> <span id="LC253" class="line" lang="plaintext"> biojava4-live | 0 | {bio-dev} | </span>
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254
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<pre style="margin: 0;"> <span id="LC254" class="line" lang="plaintext"> biosig4c++ | 0 | {physics} | </span>
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<pre style="margin: 0;"> <span id="LC255" class="line" lang="plaintext"> biosyntax | 0 | {bio} | </span>
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256
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<pre style="margin: 0;"> <span id="LC256" class="line" lang="plaintext"> camp | 0 | {imaging-dev} | </span>
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257
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<pre style="margin: 0;"> <span id="LC257" class="line" lang="plaintext"> emboss-explorer | 0 | {bio} | </span>
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258
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<pre style="margin: 0;"> <span id="LC258" class="line" lang="plaintext"> emmax | 0 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC260" class="line" lang="plaintext"> fasta3 | 0 | {<span class="idiff left right">covid-19,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC259" class="line" lang="plaintext"> fasta3 | 0 | {<span class="idiff left right">bio,covid-19</span>} | </span>
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<pre style="margin: 0;"> <span id="LC260" class="line" lang="plaintext"> fis-gtm | 0 | {his} | </span>
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261
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<pre style="margin: 0;"> <span id="LC261" class="line" lang="plaintext"> freecontact | 0 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC262" class="line" lang="plaintext"> gatb-core | 0 | {bio-dev} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -274,9 +273,10 @@ Last-Update: Sat, 28 Mar 2020 01:42:03 +0000</td>
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273
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<pre style="margin: 0;"> <span id="LC273" class="line" lang="plaintext"> libdisorder | 0 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC274" class="line" lang="plaintext"> libgenome | 0 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC275" class="line" lang="plaintext"> libgkarrays | 0 | {bio-dev} | </span>
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<pre style="margin: 0;">+<span id="LC276" class="line" lang="plaintext"> libhmsbeagle | 0 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC277" class="line" lang="plaintext"> libics | 0 | {imaging-dev,covid-19} | </span>
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<pre style="margin: 0;"> <span id="LC278" class="line" lang="plaintext"> libjloda-java | 0 | {bio-dev} | </span>
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<pre style="margin: 0;">-<span id="LC279" class="line" lang="plaintext"> libmaus2 | 0 | {<span class="idiff left right">bio-dev,covid-19</span>} | </span>
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<pre style="margin: 0;">+<span id="LC279" class="line" lang="plaintext"> libmaus2 | 0 | {<span class="idiff left right">covid-19,bio-dev</span>} | </span>
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<pre style="margin: 0;"> <span id="LC280" class="line" lang="plaintext"> libmems | 0 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC281" class="line" lang="plaintext"> libmialm | 0 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC282" class="line" lang="plaintext"> libmuscle | 0 | {bio-dev} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -291,14 +291,15 @@ Last-Update: Sat, 28 Mar 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC291" class="line" lang="plaintext"> metastudent-data-2 | 0 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC292" class="line" lang="plaintext"> mia | 0 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC293" class="line" lang="plaintext"> miaviewit | 0 | {imaging-dev} | </span>
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<pre style="margin: 0;">-<span id="LC294" class="line" lang="plaintext"> milib | 0 | {<span class="idiff left right">bio-dev,covid-19</span>} | </span>
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<pre style="margin: 0;">+<span id="LC294" class="line" lang="plaintext"> milib | 0 | {<span class="idiff left right">covid-19,bio-dev</span>} | </span>
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<pre style="margin: 0;"> <span id="LC295" class="line" lang="plaintext"> mssstest | 0 | {tools} | </span>
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<pre style="margin: 0;"> <span id="LC296" class="line" lang="plaintext"> murasaki | 0 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC297" class="line" lang="plaintext"> ncbi-vdb | 0 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC298" class="line" lang="plaintext"> orthanc-imagej | 0 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC299" class="line" lang="plaintext"> oscar | 0 | {<span class="idiff left right">data,practice,tools</span>} | </span>
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<pre style="margin: 0;">+<span id="LC299" class="line" lang="plaintext"> oscar | 0 | {<span class="idiff left right">practice,tools,data</span>} | </span>
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<pre style="margin: 0;"> <span id="LC300" class="line" lang="plaintext"> pbcopper | 0 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC301" class="line" lang="plaintext"> pbseqlib | 0 | {bio-dev} | </span>
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<pre style="margin: 0;">+<span id="LC302" class="line" lang="plaintext"> python-etelemetry | 0 | {covid-19} | </span>
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<pre style="margin: 0;"> <span id="LC303" class="line" lang="plaintext"> python-py2bit | 0 | {bio,bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC304" class="line" lang="plaintext"> python-questplus | 0 | {covid-19} | </span>
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<pre style="margin: 0;"> <span id="LC305" class="line" lang="plaintext"> python-scitrack | 0 | {covid-19} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -310,12 +311,11 @@ Last-Update: Sat, 28 Mar 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC311" class="line" lang="plaintext"> seq-gen | 0 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC312" class="line" lang="plaintext"> simpleitk | 0 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC313" class="line" lang="plaintext"> skewer | 0 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC313" class="line" lang="plaintext"> smrtanalysis | 0 | {<span class="idiff left right">covid-19,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC314" class="line" lang="plaintext"> smrtanalysis | 0 | {<span class="idiff left right">bio,covid-19</span>} | </span>
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<pre style="margin: 0;"> <span id="LC315" class="line" lang="plaintext"> solvate | 0 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC315" class="line" lang="plaintext"> spaln | 0 | {<span class="idiff left right">covid-19,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC316" class="line" lang="plaintext"> spaln | 0 | {<span class="idiff left right">bio,covid-19</span>} | </span>
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<pre style="margin: 0;"> <span id="LC317" class="line" lang="plaintext"> trim-galore | 0 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC318" class="line" lang="plaintext"> varna | 0 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC319" class="line" lang="plaintext"> vtk-dicom | 0 | {imaging-dev} | </span>
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<pre style="margin: 0;">-<span id="LC319" class="line" lang="plaintext"> python-etelemetry | -1 | {covid-19} | </span>
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<pre style="margin: 0;"> <span id="LC320" class="line" lang="plaintext">(345 rows)</span>
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<pre style="margin: 0;"> <span id="LC321" class="line" lang="plaintext"></span></pre>
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<a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/cc6056d60896da8c1c07f4f9eacf33d61a2eca6d#2654e31016bcee9bbe05d462121706cc8ed368af"><strong>outdated_med-packages.txt</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">Last-Update: Sat, 28 Mar 2020 <span class="idiff left right">01:42:03</span> +0000</span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">Last-Update: Sat, 28 Mar 2020 <span class="idiff left right">13:42:04</span> +0000</span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext"></span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext"> source | version | upstream_version | uploaders | Last uploader | Last uploaded </span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext">-------------------------------+---------------------------------+---------------------------------+---------------------------------------------------------------------------+----------------------+------------------------</span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -20,7 +20,7 @@ Last-Update: Sat, 28 Mar 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC20" class="line" lang="plaintext"> gmap | 2019-09-12 | 2020-03-12 | Alexandre Mestiashvili,Andreas Tille,Shaun Jackman | Steffen Moeller | 2019-12-30 12:37:15+00</span>
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<pre style="margin: 0;"> <span id="LC21" class="line" lang="plaintext"> hdmf | 1.5.4 | 1.6.1 | Yaroslav Halchenko | Yaroslav Halchenko | 2020-02-03 03:01:25+00</span>
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<pre style="margin: 0;"> <span id="LC22" class="line" lang="plaintext"> htsjdk | 2.18.2 | 2.21.3 | Andreas Tille,Charles Plessy,Olivier Sallou,Vincent Danjean | Andreas Tille | 2019-03-01 22:19:40+00</span>
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<pre style="margin: 0;">-<span id="LC23" class="line" lang="plaintext"> <span class="idiff left right">hyphy | 2.5.1 | 2.5.7 | Andreas Tille | Andreas Tille | 2020-01-07 21:19:50</span>+00</span>
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<pre style="margin: 0;">+<span id="LC23" class="line" lang="plaintext"> <span class="idiff left right">igdiscover | 0.11 | 0.12.3 | Steffen Moeller | Andreas Tille | 2019-09-06 07:04:02</span>+00</span>
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<pre style="margin: 0;"> <span id="LC24" class="line" lang="plaintext"> igraph | 0.8.0 | 0.8.1 | Andreas Tille | Andreas Tille | 2020-03-14 20:10:56+00</span>
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<pre style="margin: 0;"> <span id="LC25" class="line" lang="plaintext"> imagej | 1.52r | 1.52u | David Miguel Susano Pinto | Andreas Tille | 2019-12-04 14:55:11+00</span>
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<pre style="margin: 0;"> <span id="LC26" class="line" lang="plaintext"> jebl2 | 0.1+git20180418.653eb83 | 0.1+git20190308.a98448e | Andreas Tille | Andreas Tille | 2018-07-05 12:05:57+00</span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -32,6 +32,7 @@ Last-Update: Sat, 28 Mar 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC32" class="line" lang="plaintext"> libmaus2 | 2.0.713 | 2.0.714 | Andreas Tille,Steffen Moeller | Andreas Tille | 2020-03-27 09:34:39+00</span>
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<pre style="margin: 0;"> <span id="LC33" class="line" lang="plaintext"> libsis-base-java | 18.09~pre1+git20180827.fe4953e | 18.09~pre1+git20180928.45fbd31 | Andreas Tille,Olivier Sallou,Tim Booth | Andreas Tille | 2018-09-26 08:35:30+00</span>
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<pre style="margin: 0;"> <span id="LC34" class="line" lang="plaintext"> libthread-pool | 2.0.1 | 2.0.2 | Andreas Tille | Andreas Tille | 2019-11-19 21:21:23+00</span>
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<pre style="margin: 0;">+<span id="LC35" class="line" lang="plaintext"> libundead | 1.0.10 | 1.1.1 | Andreas Tille | Andreas Tille | 2019-09-13 21:06:10+00</span>
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<pre style="margin: 0;"> <span id="LC36" class="line" lang="plaintext"> metaphlan2 | 2.9.22 | 2.96.1 | Andreas Tille | Andreas Tille | 2019-11-08 07:19:11+00</span>
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<pre style="margin: 0;"> <span id="LC37" class="line" lang="plaintext"> ncbi-blast+ | 2.9.0 | 2.10.0 | Aaron M. Ucko,Andreas Tille,Olivier Sallou | Aaron M. Ucko | 2020-02-17 01:50:53+00</span>
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<pre style="margin: 0;"> <span id="LC38" class="line" lang="plaintext"> ncbi-entrez-direct | 12.0.20190816 | 13.5.20200306 | Aaron M. Ucko | Aaron M. Ucko | 2020-02-03 03:53:53+00</span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -55,11 +56,13 @@ Last-Update: Sat, 28 Mar 2020 01:42:03 +0000</td>
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<pre style="margin: 0;"> <span id="LC56" class="line" lang="plaintext"> salmon | 0.12.0 | 1.1.0 | Kevin Murray,Michael R. Crusoe | Andreas Tille | 2018-12-13 19:05:56+00</span>
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<pre style="margin: 0;"> <span id="LC57" class="line" lang="plaintext"> scrm | 1.7.3 | 1.7.4 | Kevin Murray | Andreas Tille | 2018-12-17 13:05:34+00</span>
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<pre style="margin: 0;"> <span id="LC58" class="line" lang="plaintext"> seaview | 4.7 | 5.0.2 | Andreas Tille,Charles Plessy | Andreas Tille | 2018-05-09 13:43:40+00</span>
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<pre style="margin: 0;">+<span id="LC59" class="line" lang="plaintext"> simka | 1.5.1 | 1.5.2 | Shayan Doust | Andreas Tille | 2020-01-12 18:49:47+00</span>
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<pre style="margin: 0;"> <span id="LC60" class="line" lang="plaintext"> spoa | 3.0.1 | 3.0.2 | Andreas Tille | Andreas Tille | 2019-09-16 11:53:05+00</span>
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<pre style="margin: 0;"> <span id="LC61" class="line" lang="plaintext"> sumatra | 1.0.31 | 1.0.34 | Andreas Tille,Tim Booth | Andreas Tille | 2018-10-16 10:06:33+00</span>
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<pre style="margin: 0;"> <span id="LC62" class="line" lang="plaintext"> t-coffee | 12.00.7fb08c2 | 13.41.0.28bdc39 | Andreas Tille,Steffen Moeller | Andreas Tille | 2019-02-15 07:57:10+00</span>
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<pre style="margin: 0;">+<span id="LC63" class="line" lang="plaintext"> ugene | 33.0 | 34.0 | Andreas Tille,Olivier Sallou,Steffen Moeller | Andreas Tille | 2020-01-12 16:25:44+00</span>
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<pre style="margin: 0;"> <span id="LC64" class="line" lang="plaintext"> xmedcon | 0.16.1 | 0.16.2 | Andreas Tille,Roland Marcus Rutschmann | Andreas Tille | 2019-01-25 18:23:59+00</span>
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<pre style="margin: 0;">-<span id="LC62" class="line" lang="plaintext">(<span class="idiff left right">57</span> rows)</span>
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<pre style="margin: 0;">+<span id="LC65" class="line" lang="plaintext">(<span class="idiff left right">60</span> rows)</span>
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<td class="diff-line-num new_line" data-linenumber="66" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
66
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<pre style="margin: 0;"> <span id="LC66" class="line" lang="plaintext"></span>
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<td class="diff-line-num old_line" data-linenumber="64" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
64
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<td class="diff-line-num new_line" data-linenumber="67" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
67
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<td class="line_content" style="padding-left: 0.5em; padding-right: 0.5em;">
<pre style="margin: 0;"> <span id="LC67" class="line" lang="plaintext"></span>
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<td class="diff-line-num old_line" data-linenumber="65" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
65
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<td class="diff-line-num new_line" data-linenumber="68" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">
68
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<pre style="margin: 0;"> <span id="LC68" class="line" lang="plaintext"> source | id | severity | title </span>
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