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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/community/helper-scripts">Debian Med / community / helper-scripts</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/05a645c49c230ce3a4fedebfb0ab0bb2eee3268e">05a645c4</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-04-10T13:44:44+00:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">automatic update
</pre>
</li>
</ul>
<h4>2 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#f6d55d24085decec06151dd27f30199089d856ca">
debian-med-tests.txt
</a>
</li>
<li class="file-stats">
<a href="#2654e31016bcee9bbe05d462121706cc8ed368af">
outdated_med-packages.txt
</a>
</li>
</ul>
<h4>Changes:</h4>
<li id="f6d55d24085decec06151dd27f30199089d856ca">
<a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/05a645c49c230ce3a4fedebfb0ab0bb2eee3268e#f6d55d24085decec06151dd27f30199089d856ca"><strong>debian-med-tests.txt</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">Last-Update: Fri, 10 Apr 2020 <span class="idiff left right">01:42:04</span> +0000</span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">Last-Update: Fri, 10 Apr 2020 <span class="idiff left right">13:42:03</span> +0000</span>
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext"> Source | Vote | Tasks | Tags </span>
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext">-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------</span>
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<pre style="margin: 0;">-<span id="LC5" class="line" lang="plaintext"> dcmtk | 17<span class="idiff left right">0</span> | {imaging,covid-19} | </span>
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="plaintext"> orthanc | 9<span class="idiff left right">5 | {imaging,covid-19,practice</span>} | </span>
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<pre style="margin: 0;">-<span id="LC7" class="line" lang="plaintext"> gdcm | 4<span class="idiff left right">3</span> | {imaging-dev} | </span>
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<pre style="margin: 0;">-<span id="LC8" class="line" lang="plaintext"> orthanc-wsi | 41 | {<span class="idiff left right">imaging,laboratory,covid-19,practice,oncology,his</span>} | </span>
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<pre style="margin: 0;">+<span id="LC5" class="line" lang="plaintext"> dcmtk | 17<span class="idiff left right">7</span> | {imaging,covid-19} | </span>
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<pre style="margin: 0;">+<span id="LC6" class="line" lang="plaintext"> orthanc | 9<span class="idiff left right">7 | {covid-19,practice,imaging</span>} | </span>
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<pre style="margin: 0;">+<span id="LC7" class="line" lang="plaintext"> gdcm | 4<span class="idiff left right">4</span> | {imaging-dev} | </span>
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<pre style="margin: 0;">+<span id="LC8" class="line" lang="plaintext"> orthanc-wsi | 41 | {<span class="idiff left right">practice,laboratory,imaging,oncology,his,covid-19</span>} | </span>
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<pre style="margin: 0;"> <span id="LC9" class="line" lang="plaintext"> amide | 30 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC10" class="line" lang="plaintext"> htsjdk | <span class="idiff left right">29</span> | {bio-dev} | </span>
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<pre style="margin: 0;">-<span id="LC11" class="line" lang="plaintext"> dcm2niix | 2<span class="idiff left right">6</span> | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC10" class="line" lang="plaintext"> htsjdk | <span class="idiff left right">30</span> | {bio-dev} | </span>
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<pre style="margin: 0;">+<span id="LC11" class="line" lang="plaintext"> dcm2niix | 2<span class="idiff left right">5</span> | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC12" class="line" lang="plaintext"> dicom3tools | 24 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC13" class="line" lang="plaintext"> dicomscope | 2<span class="idiff left right">4</span> | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC14" class="line" lang="plaintext"> gdcm | 22 | {<span class="idiff left right">covid-19,imaging</span>} | </span>
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<pre style="margin: 0;">+<span id="LC13" class="line" lang="plaintext"> dicomscope | 2<span class="idiff left right">3</span> | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC14" class="line" lang="plaintext"> gdcm | 22 | {<span class="idiff left right">imaging,covid-19</span>} | </span>
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<pre style="margin: 0;"> <span id="LC15" class="line" lang="plaintext"> gnumed-server | 19 | {covid-19,practice} | </span>
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<pre style="margin: 0;">-<span id="LC16" class="line" lang="plaintext"> ngs-sdk | 1<span class="idiff left right">7</span> | {bio-dev} | </span>
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<pre style="margin: 0;">+<span id="LC16" class="line" lang="plaintext"> ngs-sdk | 1<span class="idiff left right">9</span> | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC17" class="line" lang="plaintext"> minc-tools | 14 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC18" class="line" lang="plaintext"> ncbi-entrez-direct | 14 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC19" class="line" lang="plaintext"> adun.app | 12 | {bio} | </span>
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<pre style="margin: 0;">+<span id="LC19" class="line" lang="plaintext"> adun.app | 13 | {bio} | </span>
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<pre style="margin: 0;">+<span id="LC20" class="line" lang="plaintext"> hunspell-en-med | 13 | {tools} | </span>
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<pre style="margin: 0;"> <span id="LC21" class="line" lang="plaintext"> invesalius | 12 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC21" class="line" lang="plaintext"> king | 12 | {<span class="idiff left right">typesetting,imag</span>ing} | </span>
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<pre style="margin: 0;">+<span id="LC22" class="line" lang="plaintext"> king | 12 | {<span class="idiff left right">imaging,typesett</span>ing} | </span>
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<pre style="margin: 0;"> <span id="LC23" class="line" lang="plaintext"> vtk-dicom | 12 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC23" class="line" lang="plaintext"> hunspell-en-med | 11 | {tools} | </span>
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<pre style="margin: 0;"> <span id="LC24" class="line" lang="plaintext"> pixelmed | 11 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC25" class="line" lang="plaintext"> cgview | 10 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC26" class="line" lang="plaintext"> ea-utils | 10 | {bio} | </span>
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<pre style="margin: 0;">+<span id="LC27" class="line" lang="plaintext"> gasic | 10 | {cloud,bio} | </span>
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<pre style="margin: 0;"> <span id="LC28" class="line" lang="plaintext"> insighttoolkit4 | 10 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC29" class="line" lang="plaintext"> mia | 10 | {imaging} | </span>
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<pre style="margin: 0;">+<span id="LC30" class="line" lang="plaintext"> ngs-sdk | 10 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC31" class="line" lang="plaintext"> openslide | 10 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC30" class="line" lang="plaintext"> psychopy | 10 | {psychology} | </span>
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<pre style="margin: 0;"> <span id="LC32" class="line" lang="plaintext"> staden | 10 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC32" class="line" lang="plaintext"> <span class="idiff left right">gasic | 9 | {bio,cloud} </span> | </span>
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<pre style="margin: 0;">+<span id="LC33" class="line" lang="plaintext"> <span class="idiff left right">biosig4c++ | 9 | {physics,imaging}</span> | </span>
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<pre style="margin: 0;"> <span id="LC34" class="line" lang="plaintext"> gdcm | 9 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC35" class="line" lang="plaintext"> jebl2 | 9 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC36" class="line" lang="plaintext"> king-probe | 9 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC36" class="line" lang="plaintext"> ngs-sdk | 9 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC37" class="line" lang="plaintext"> obitools | 9 | {bio} | </span>
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<pre style="margin: 0;">+<span id="LC38" class="line" lang="plaintext"> psychopy | 9 | {psychology} | </span>
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<pre style="margin: 0;"> <span id="LC39" class="line" lang="plaintext"> biojava-live | 8 | {bio-dev} | </span>
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<pre style="margin: 0;">-<span id="LC39" class="line" lang="plaintext"> biosig4c++ | 8 | {physics,imaging} | </span>
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<pre style="margin: 0;"> <span id="LC40" class="line" lang="plaintext"> dazzdb | 8 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC41" class="line" lang="plaintext"> librg-utils-perl | 8 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC42" class="line" lang="plaintext"> mipe | 8 | {bio,cloud} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -46,7 +46,7 @@ Last-Update: Fri, 10 Apr 2020 01:42:04 +0000</td>
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<pre style="margin: 0;"> <span id="LC46" class="line" lang="plaintext"> arden | 7 | {cloud,bio} | </span>
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<pre style="margin: 0;"> <span id="LC47" class="line" lang="plaintext"> biomaj3-cli | 7 | {cloud} | </span>
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<pre style="margin: 0;"> <span id="LC48" class="line" lang="plaintext"> bppsuite | 7 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC49" class="line" lang="plaintext"> diamond-aligner | 7 | {<span class="idiff left right">covid-19,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC49" class="line" lang="plaintext"> diamond-aligner | 7 | {<span class="idiff left right">bio,covid-19</span>} | </span>
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<pre style="margin: 0;"> <span id="LC50" class="line" lang="plaintext"> fitgcp | 7 | {cloud,bio} | </span>
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<pre style="margin: 0;"> <span id="LC51" class="line" lang="plaintext"> lagan | 7 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC52" class="line" lang="plaintext"> phast | 7 | {bio} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -54,19 +54,18 @@ Last-Update: Fri, 10 Apr 2020 01:42:04 +0000</td>
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<pre style="margin: 0;"> <span id="LC54" class="line" lang="plaintext"> salmon | 7 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC55" class="line" lang="plaintext"> tree-puzzle | 7 | {bio,cloud,bio-phylogeny} | </span>
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<pre style="margin: 0;"> <span id="LC56" class="line" lang="plaintext"> abacas | 6 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC57" class="line" lang="plaintext"> anfo | 6 | {<span class="idiff left right">cloud,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC57" class="line" lang="plaintext"> anfo | 6 | {<span class="idiff left right">bio,cloud</span>} | </span>
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<pre style="margin: 0;"> <span id="LC58" class="line" lang="plaintext"> biomaj3-daemon | 6 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC59" class="line" lang="plaintext"> cluster3 | 6 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC59" class="line" lang="plaintext"> ecopcr | 6 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC60" class="line" lang="plaintext"> embassy-domainatrix | 6 | {bio,cloud} | </span>
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<pre style="margin: 0;"> <span id="LC61" class="line" lang="plaintext"> fastlink | 6 | {cloud,bio} | </span>
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<pre style="margin: 0;">-<span id="LC63" class="line" lang="plaintext"> freecontact | 6 | {<span class="idiff left right">cloud,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC62" class="line" lang="plaintext"> freecontact | 6 | {<span class="idiff left right">bio,cloud</span>} | </span>
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<pre style="margin: 0;"> <span id="LC63" class="line" lang="plaintext"> ncbi-seg | 6 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC64" class="line" lang="plaintext"> neobio | 6 | {bio,cloud} | </span>
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<pre style="margin: 0;"> <span id="LC65" class="line" lang="plaintext"> norsp | 6 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC66" class="line" lang="plaintext"> orthanc-webviewer | 6 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC67" class="line" lang="plaintext"> piler | 6 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC69" class="line" lang="plaintext"> prime-phylo | 6 | {<span class="idiff left right">bio,cloud</span>} | </span>
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<pre style="margin: 0;">+<span id="LC68" class="line" lang="plaintext"> prime-phylo | 6 | {<span class="idiff left right">cloud,bio</span>} | </span>
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<pre style="margin: 0;"> <span id="LC69" class="line" lang="plaintext"> pscan-tfbs | 6 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC70" class="line" lang="plaintext"> pymia | 6 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC71" class="line" lang="plaintext"> seqsero | 6 | {bio} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -78,6 +77,7 @@ Last-Update: Fri, 10 Apr 2020 01:42:04 +0000</td>
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<pre style="margin: 0;"> <span id="LC77" class="line" lang="plaintext"> bio-rainbow | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC78" class="line" lang="plaintext"> bitseq | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC79" class="line" lang="plaintext"> clonalorigin | 5 | {bio} | </span>
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<pre style="margin: 0;">+<span id="LC80" class="line" lang="plaintext"> cluster3 | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC81" class="line" lang="plaintext"> codonw | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC82" class="line" lang="plaintext"> daligner | 5 | {bio-ngs,bio} | </span>
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<pre style="margin: 0;"> <span id="LC83" class="line" lang="plaintext"> edtsurf | 5 | {bio} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -92,8 +92,10 @@ Last-Update: Fri, 10 Apr 2020 01:42:04 +0000</td>
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<pre style="margin: 0;"> <span id="LC92" class="line" lang="plaintext"> indelible | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC93" class="line" lang="plaintext"> jaligner | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC94" class="line" lang="plaintext"> jellyfish1 | 5 | {bio} | </span>
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<pre style="margin: 0;">+<span id="LC95" class="line" lang="plaintext"> libncl | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC96" class="line" lang="plaintext"> maqview | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC97" class="line" lang="plaintext"> melting | 5 | {cloud,bio} | </span>
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<pre style="margin: 0;">+<span id="LC98" class="line" lang="plaintext"> mrs | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC99" class="line" lang="plaintext"> phyutility | 5 | {bio,cloud} | </span>
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<pre style="margin: 0;"> <span id="LC100" class="line" lang="plaintext"> placnet | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC101" class="line" lang="plaintext"> predictprotein | 5 | {bio} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -101,20 +103,20 @@ Last-Update: Fri, 10 Apr 2020 01:42:04 +0000</td>
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<pre style="margin: 0;"> <span id="LC103" class="line" lang="plaintext"> rambo-k | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC104" class="line" lang="plaintext"> seer | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC105" class="line" lang="plaintext"> seqtools | 5 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC104" class="line" lang="plaintext"> sibsim4 | 5 | {<span class="idiff left right">bio,cloud</span>} | </span>
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<pre style="margin: 0;">+<span id="LC106" class="line" lang="plaintext"> sibsim4 | 5 | {<span class="idiff left right">cloud,bio</span>} | </span>
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<pre style="margin: 0;"> <span id="LC107" class="line" lang="plaintext"> sigma-align | 5 | {cloud,bio,bio-phylogeny} | </span>
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<pre style="margin: 0;"> <span id="LC108" class="line" lang="plaintext"> sumatra | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC109" class="line" lang="plaintext"> vsearch | 5 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC110" class="line" lang="plaintext"> baitfisher | 4 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC111" class="line" lang="plaintext"> bart-view | 4 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC112" class="line" lang="plaintext"> beads | 4 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC111" class="line" lang="plaintext"> beast-mcmc | 4 | {bio<span class="idiff left right">,bio-phylogeny</span>} | </span>
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<pre style="margin: 0;">+<span id="LC113" class="line" lang="plaintext"> beast-mcmc | 4 | {bio<span class="idiff left right">-phylogeny,bio</span>} | </span>
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<pre style="margin: 0;"> <span id="LC114" class="line" lang="plaintext"> bio-tradis | 4 | {bio,bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC115" class="line" lang="plaintext"> brig | 4 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC116" class="line" lang="plaintext"> centrifuge | 4 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC117" class="line" lang="plaintext"> clonalframeml | 4 | {covid-19,bio} | </span>
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<pre style="margin: 0;"> <span id="LC118" class="line" lang="plaintext"> dascrubber | 4 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC117" class="line" lang="plaintext"> delly | 4 | {<span class="idiff left right">bio,covid-19</span>} | </span>
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<pre style="margin: 0;">+<span id="LC119" class="line" lang="plaintext"> delly | 4 | {<span class="idiff left right">covid-19,bio</span>} | </span>
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<pre style="margin: 0;"> <span id="LC120" class="line" lang="plaintext"> dindel | 4 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC121" class="line" lang="plaintext"> dwgsim | 4 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC122" class="line" lang="plaintext"> elph | 4 | {bio} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -123,19 +125,17 @@ Last-Update: Fri, 10 Apr 2020 01:42:04 +0000</td>
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<pre style="margin: 0;"> <span id="LC125" class="line" lang="plaintext"> ipig | 4 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC126" class="line" lang="plaintext"> lamarc | 4 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC127" class="line" lang="plaintext"> libdivsufsort | 4 | {bio-dev} | </span>
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<pre style="margin: 0;">-<span id="LC126" class="line" lang="plaintext"> libncl | 4 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC128" class="line" lang="plaintext"> mapsembler2 | 4 | {bio,cloud} | </span>
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<pre style="margin: 0;"> <span id="LC129" class="line" lang="plaintext"> mencal | 4 | {tools} | </span>
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<pre style="margin: 0;"> <span id="LC130" class="line" lang="plaintext"> microbegps | 4 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC131" class="line" lang="plaintext"> mlv-smile | 4 | {bio,cloud} | </span>
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<pre style="margin: 0;">-<span id="LC131" class="line" lang="plaintext"> mrs | 4 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC132" class="line" lang="plaintext"> murasaki | 4 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC133" class="line" lang="plaintext"> openslide | 4 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC134" class="line" lang="plaintext"> paraclu | 4 | {cloud,bio} | </span>
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<pre style="margin: 0;"> <span id="LC135" class="line" lang="plaintext"> perm | 4 | {bio,cloud} | </span>
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<pre style="margin: 0;"> <span id="LC136" class="line" lang="plaintext"> poretools | 4 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC137" class="line" lang="plaintext"> proalign | 4 | {bio<span class="idiff left right">-phylogeny,bio</span>} | </span>
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<pre style="margin: 0;">-<span id="LC138" class="line" lang="plaintext"> probabel | 4 | {<span class="idiff left right">cloud,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC137" class="line" lang="plaintext"> proalign | 4 | {bio<span class="idiff left right">,bio-phylogeny</span>} | </span>
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<pre style="margin: 0;">+<span id="LC138" class="line" lang="plaintext"> probabel | 4 | {<span class="idiff left right">bio,cloud</span>} | </span>
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<pre style="margin: 0;"> <span id="LC139" class="line" lang="plaintext"> quorum | 4 | {bio} | </span>
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140
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<pre style="margin: 0;"> <span id="LC140" class="line" lang="plaintext"> rdp-alignment | 4 | {bio} | </span>
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141
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<pre style="margin: 0;"> <span id="LC141" class="line" lang="plaintext"> rdp-readseq | 4 | {bio} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -149,8 +149,9 @@ Last-Update: Fri, 10 Apr 2020 01:42:04 +0000</td>
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149
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<pre style="margin: 0;"> <span id="LC149" class="line" lang="plaintext"> treeview | 4 | {bio-phylogeny,bio} | </span>
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<pre style="margin: 0;"> <span id="LC150" class="line" lang="plaintext"> assemblytics | 3 | {bio} | </span>
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151
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<pre style="margin: 0;"> <span id="LC151" class="line" lang="plaintext"> beast2-mcmc | 3 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC152" class="line" lang="plaintext"> blasr | 3 | {bio<span class="idiff left right">-ngs,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC152" class="line" lang="plaintext"> blasr | 3 | {bio<span class="idiff left right">,bio-ngs</span>} | </span>
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153
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<pre style="margin: 0;"> <span id="LC153" class="line" lang="plaintext"> canu | 3 | {bio} | </span>
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154
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<pre style="margin: 0;">+<span id="LC154" class="line" lang="plaintext"> cufflinks | 3 | {bio,cloud} | </span>
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<pre style="margin: 0;"> <span id="LC155" class="line" lang="plaintext"> dicompyler | 3 | {oncology} | </span>
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<pre style="margin: 0;"> <span id="LC156" class="line" lang="plaintext"> jmodeltest | 3 | {bio-phylogeny,bio} | </span>
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<pre style="margin: 0;"> <span id="LC157" class="line" lang="plaintext"> libgff | 3 | {bio-dev} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -165,13 +166,13 @@ Last-Update: Fri, 10 Apr 2020 01:42:04 +0000</td>
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<pre style="margin: 0;"> <span id="LC166" class="line" lang="plaintext"> metaphlan2 | 3 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC167" class="line" lang="plaintext"> mptp | 3 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC168" class="line" lang="plaintext"> nutsqlite | 3 | {tools} | </span>
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<pre style="margin: 0;">-<span id="LC168" class="line" lang="plaintext"> orthanc-dicomweb | 3 | {<span class="idiff left right">imaging,covid-19</span>} | </span>
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<pre style="margin: 0;">+<span id="LC169" class="line" lang="plaintext"> orthanc-dicomweb | 3 | {<span class="idiff left right">covid-19,imaging</span>} | </span>
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<pre style="margin: 0;"> <span id="LC170" class="line" lang="plaintext"> orthanc-mysql | 3 | {imaging} | </span>
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<pre style="margin: 0;"> <span id="LC171" class="line" lang="plaintext"> patman | 3 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC172" class="line" lang="plaintext"> pbdagcon | 3 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC173" class="line" lang="plaintext"> prottest | 3 | {bio-phylogeny,bio} | </span>
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<pre style="margin: 0;"> <span id="LC174" class="line" lang="plaintext"> rdp-classifier | 3 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC174" class="line" lang="plaintext"> samblaster | 3 | {<span class="idiff left right">covid-19,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC175" class="line" lang="plaintext"> samblaster | 3 | {<span class="idiff left right">bio,covid-19</span>} | </span>
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175
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176
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<pre style="margin: 0;"> <span id="LC176" class="line" lang="plaintext"> scythe | 3 | {bio} | </span>
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176
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177
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<pre style="margin: 0;"> <span id="LC177" class="line" lang="plaintext"> segemehl | 3 | {bio} | </span>
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177
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178
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<pre style="margin: 0;"> <span id="LC178" class="line" lang="plaintext"> sga | 3 | {bio} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -180,12 +181,11 @@ Last-Update: Fri, 10 Apr 2020 01:42:04 +0000</td>
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180
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181
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<pre style="margin: 0;"> <span id="LC181" class="line" lang="plaintext"> stacks | 3 | {bio} | </span>
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181
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182
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<pre style="margin: 0;"> <span id="LC182" class="line" lang="plaintext"> transrate-tools | 3 | {bio} | </span>
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182
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183
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<pre style="margin: 0;"> <span id="LC183" class="line" lang="plaintext"> biosig4c++ | 2 | {imaging-dev,physics} | </span>
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183
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<pre style="margin: 0;">-<span id="LC183" class="line" lang="plaintext"> cufflinks | 2 | {bio,cloud} | </span>
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184
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184
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<pre style="margin: 0;"> <span id="LC184" class="line" lang="plaintext"> elastix | 2 | {imaging} | </span>
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185
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185
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<pre style="margin: 0;"> <span id="LC185" class="line" lang="plaintext"> getdata | 2 | {bio} | </span>
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186
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186
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<pre style="margin: 0;"> <span id="LC186" class="line" lang="plaintext"> igor | 2 | {bio} | </span>
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187
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187
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<pre style="margin: 0;"> <span id="LC187" class="line" lang="plaintext"> libsmithwaterman | 2 | {bio} | </span>
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188
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<pre style="margin: 0;">-<span id="LC188" class="line" lang="plaintext"> mhap | 2 | {bio<span class="idiff left right">,bio-ngs</span>} | </span>
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188
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<pre style="margin: 0;">+<span id="LC188" class="line" lang="plaintext"> mhap | 2 | {bio<span class="idiff left right">-ngs,bio</span>} | </span>
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189
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189
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<pre style="margin: 0;"> <span id="LC189" class="line" lang="plaintext"> ngs-sdk | 2 | {bio-dev} | </span>
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190
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<pre style="margin: 0;"> <span id="LC190" class="line" lang="plaintext"> pal2nal | 2 | {bio} | </span>
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191
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<pre style="margin: 0;"> <span id="LC191" class="line" lang="plaintext"> phipack | 2 | {bio} | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="208" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="diff-line-num unfold js-unfold new_line" data-linenumber="208" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -208,17 +208,17 @@ Last-Update: Fri, 10 Apr 2020 01:42:04 +0000</td>
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208
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208
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<pre style="margin: 0;"> <span id="LC208" class="line" lang="plaintext"> suitename | 2 | {bio} | </span>
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209
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209
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<pre style="margin: 0;"> <span id="LC209" class="line" lang="plaintext"> surankco | 2 | {bio} | </span>
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210
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210
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<pre style="margin: 0;"> <span id="LC210" class="line" lang="plaintext"> sweed | 2 | {bio} | </span>
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211
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<pre style="margin: 0;">-<span id="LC211" class="line" lang="plaintext"> thesias | 2 | {<span class="idiff left right">bio,covid-19</span>} | </span>
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212
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<pre style="margin: 0;">-<span id="LC212" class="line" lang="plaintext"> tnseq-transit | 2 | {<span class="idiff left right">covid-19,bio</span>} | </span>
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211
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<pre style="margin: 0;">+<span id="LC211" class="line" lang="plaintext"> thesias | 2 | {<span class="idiff left right">covid-19,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC212" class="line" lang="plaintext"> tnseq-transit | 2 | {<span class="idiff left right">bio,covid-19</span>} | </span>
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213
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<pre style="margin: 0;"> <span id="LC213" class="line" lang="plaintext"> tvc | 2 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC214" class="line" lang="plaintext"> varscan | 2 | {bio} | </span>
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215
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<pre style="margin: 0;"> <span id="LC215" class="line" lang="plaintext"> yaha | 2 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC216" class="line" lang="plaintext"> zalign | 2 | {<span class="idiff left right">bio,cloud</span>} | </span>
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<pre style="margin: 0;">+<span id="LC216" class="line" lang="plaintext"> zalign | 2 | {<span class="idiff left right">cloud,bio</span>} | </span>
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217
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<pre style="margin: 0;"> <span id="LC217" class="line" lang="plaintext"> atropos | 1 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC218" class="line" lang="plaintext"> biosig4c++ | 1 | {<span class="idiff left right">imaging-dev,physics</span>} | </span>
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<pre style="margin: 0;">+<span id="LC218" class="line" lang="plaintext"> biosig4c++ | 1 | {<span class="idiff left right">physics,imaging-dev</span>} | </span>
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219
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219
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<pre style="margin: 0;"> <span id="LC219" class="line" lang="plaintext"> blimps | 1 | {bio} | </span>
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220
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<pre style="margin: 0;"> <span id="LC220" class="line" lang="plaintext"> ctn | 1 | {imaging-dev} | </span>
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<pre style="margin: 0;">-<span id="LC221" class="line" lang="plaintext"> embassy-phylip | 1 | {<span class="idiff left right">cloud,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC221" class="line" lang="plaintext"> embassy-phylip | 1 | {<span class="idiff left right">bio,cloud</span>} | </span>
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<pre style="margin: 0;"> <span id="LC222" class="line" lang="plaintext"> kma | 1 | {bio} | </span>
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223
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<pre style="margin: 0;"> <span id="LC223" class="line" lang="plaintext"> kmerresistance | 1 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC224" class="line" lang="plaintext"> libchado-perl | 1 | {bio-dev} | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="234" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -234,7 +234,7 @@ Last-Update: Fri, 10 Apr 2020 01:42:04 +0000</td>
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<pre style="margin: 0;"> <span id="LC234" class="line" lang="plaintext"> samtools-legacy | 1 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC235" class="line" lang="plaintext"> sift | 1 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC236" class="line" lang="plaintext"> skesa | 1 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC237" class="line" lang="plaintext"> stringtie | 1 | {<span class="idiff left right">covid-19,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC237" class="line" lang="plaintext"> stringtie | 1 | {<span class="idiff left right">bio,covid-19</span>} | </span>
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238
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<pre style="margin: 0;"> <span id="LC238" class="line" lang="plaintext"> trace2dbest | 1 | {bio} | </span>
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239
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<pre style="margin: 0;"> <span id="LC239" class="line" lang="plaintext"> tree-puzzle | 1 | {bio-phylogeny,bio,cloud} | </span>
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<pre style="margin: 0;"> <span id="LC240" class="line" lang="plaintext"> velvetoptimiser | 1 | {bio} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -254,7 +254,7 @@ Last-Update: Fri, 10 Apr 2020 01:42:04 +0000</td>
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254
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254
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<pre style="margin: 0;"> <span id="LC254" class="line" lang="plaintext"> fis-gtm | 0 | {his} | </span>
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<pre style="margin: 0;"> <span id="LC255" class="line" lang="plaintext"> freecontact | 0 | {bio-dev} | </span>
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256
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<pre style="margin: 0;"> <span id="LC256" class="line" lang="plaintext"> gatb-core | 0 | {bio-dev} | </span>
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<pre style="margin: 0;">-<span id="LC257" class="line" lang="plaintext"> htscodecs | 0 | {<span class="idiff left right">bio-dev,covid-19</span>} | </span>
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<pre style="margin: 0;">+<span id="LC257" class="line" lang="plaintext"> htscodecs | 0 | {<span class="idiff left right">covid-19,bio-dev</span>} | </span>
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258
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<pre style="margin: 0;"> <span id="LC258" class="line" lang="plaintext"> libbigwig | 0 | {bio-dev} | </span>
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259
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259
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<pre style="margin: 0;"> <span id="LC259" class="line" lang="plaintext"> libbiod | 0 | {bio-dev} | </span>
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260
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<pre style="margin: 0;"> <span id="LC260" class="line" lang="plaintext"> libbio-mage-utils-perl | 0 | {bio-dev} | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="270" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -270,9 +270,9 @@ Last-Update: Fri, 10 Apr 2020 01:42:04 +0000</td>
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270
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<pre style="margin: 0;"> <span id="LC270" class="line" lang="plaintext"> libgenome | 0 | {bio-dev} | </span>
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271
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271
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<pre style="margin: 0;"> <span id="LC271" class="line" lang="plaintext"> libgkarrays | 0 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC272" class="line" lang="plaintext"> libhmsbeagle | 0 | {bio-dev} | </span>
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<pre style="margin: 0;">-<span id="LC273" class="line" lang="plaintext"> libics | 0 | {<span class="idiff left right">covid-19,imaging-dev</span>} | </span>
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<pre style="margin: 0;">+<span id="LC273" class="line" lang="plaintext"> libics | 0 | {<span class="idiff left right">imaging-dev,covid-19</span>} | </span>
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274
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<pre style="margin: 0;"> <span id="LC274" class="line" lang="plaintext"> libjloda-java | 0 | {bio-dev} | </span>
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<pre style="margin: 0;">-<span id="LC275" class="line" lang="plaintext"> libmaus2 | 0 | {<span class="idiff left right">covid-19,bio-dev</span>} | </span>
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<pre style="margin: 0;">+<span id="LC275" class="line" lang="plaintext"> libmaus2 | 0 | {<span class="idiff left right">bio-dev,covid-19</span>} | </span>
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<pre style="margin: 0;"> <span id="LC276" class="line" lang="plaintext"> libmems | 0 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC277" class="line" lang="plaintext"> libmialm | 0 | {imaging-dev} | </span>
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<pre style="margin: 0;"> <span id="LC278" class="line" lang="plaintext"> libmuscle | 0 | {bio-dev} | </span>
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<td class="diff-line-num unfold js-unfold old_line" data-linenumber="296" style="width: 35px; color: rgba(0,0,0,0.3); border-right-width: 1px; border-right-color: #f0f0f0; border-right-style: solid; padding: 0 5px;" align="right" bgcolor="#fafafa">...</td>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -296,10 +296,10 @@ Last-Update: Fri, 10 Apr 2020 01:42:04 +0000</td>
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296
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<pre style="margin: 0;"> <span id="LC296" class="line" lang="plaintext"> ncbi-vdb | 0 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC297" class="line" lang="plaintext"> opencfu | 0 | {laboratory} | </span>
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<pre style="margin: 0;"> <span id="LC298" class="line" lang="plaintext"> orthanc-imagej | 0 | {imaging} | </span>
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<pre style="margin: 0;">-<span id="LC299" class="line" lang="plaintext"> oscar | 0 | {<span class="idiff left right">practice,data,tools</span>} | </span>
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<pre style="margin: 0;">+<span id="LC299" class="line" lang="plaintext"> oscar | 0 | {<span class="idiff left right">data,tools,practice</span>} | </span>
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<pre style="margin: 0;"> <span id="LC300" class="line" lang="plaintext"> pbcopper | 0 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC301" class="line" lang="plaintext"> pbseqlib | 0 | {bio-dev} | </span>
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<pre style="margin: 0;">-<span id="LC302" class="line" lang="plaintext"> python-py2bit | 0 | {bio<span class="idiff left right">-dev,bio</span>} | </span>
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<pre style="margin: 0;">+<span id="LC302" class="line" lang="plaintext"> python-py2bit | 0 | {bio<span class="idiff left right">,bio-dev</span>} | </span>
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<pre style="margin: 0;"> <span id="LC303" class="line" lang="plaintext"> relion | 0 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC304" class="line" lang="plaintext"> relion | 0 | {bio-dev} | </span>
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<pre style="margin: 0;"> <span id="LC305" class="line" lang="plaintext"> sambamba | 0 | {bio} | </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -310,12 +310,12 @@ Last-Update: Fri, 10 Apr 2020 01:42:04 +0000</td>
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<pre style="margin: 0;"> <span id="LC310" class="line" lang="plaintext"> skewer | 0 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC311" class="line" lang="plaintext"> smrtanalysis | 0 | {covid-19,bio} | </span>
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<pre style="margin: 0;"> <span id="LC312" class="line" lang="plaintext"> solvate | 0 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC313" class="line" lang="plaintext"> spaln | 0 | {<span class="idiff left right">bio,covid-19</span>} | </span>
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<pre style="margin: 0;">+<span id="LC313" class="line" lang="plaintext"> spaln | 0 | {<span class="idiff left right">covid-19,bio</span>} | </span>
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<pre style="margin: 0;"> <span id="LC314" class="line" lang="plaintext"> trim-galore | 0 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC315" class="line" lang="plaintext"> varna | 0 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC316" class="line" lang="plaintext"> vtk-dicom | 0 | {imaging-dev} | </span>
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<pre style="margin: 0;">+<span id="LC317" class="line" lang="plaintext"> wtdbg2 | 0 | {covid-19} | </span>
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<pre style="margin: 0;"> <span id="LC318" class="line" lang="plaintext"> bustools | -1 | {bio} | </span>
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<pre style="margin: 0;"> <span id="LC319" class="line" lang="plaintext"> relion | -1 | {bio} | </span>
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<pre style="margin: 0;">-<span id="LC319" class="line" lang="plaintext"> wtdbg2 | -1 | {covid-19} | </span>
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<pre style="margin: 0;"> <span id="LC320" class="line" lang="plaintext">(345 rows)</span>
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<pre style="margin: 0;"> <span id="LC321" class="line" lang="plaintext"></span></pre>
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<a href="https://salsa.debian.org/med-team/community/helper-scripts/-/commit/05a645c49c230ce3a4fedebfb0ab0bb2eee3268e#2654e31016bcee9bbe05d462121706cc8ed368af"><strong>outdated_med-packages.txt</strong></a>
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<pre style="margin: 0;">-<span id="LC1" class="line" lang="plaintext">Last-Update: Fri, 10 Apr 2020 <span class="idiff left right">01</span>:42:04 +0000</span>
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<pre style="margin: 0;">+<span id="LC1" class="line" lang="plaintext">Last-Update: Fri, 10 Apr 2020 <span class="idiff left right">13</span>:42:04 +0000</span>
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<pre style="margin: 0;"> <span id="LC2" class="line" lang="plaintext"></span>
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3
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<pre style="margin: 0;"> <span id="LC3" class="line" lang="plaintext"> source | version | upstream_version | uploaders | Last uploader | Last uploaded </span>
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4
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<pre style="margin: 0;"> <span id="LC4" class="line" lang="plaintext">-------------------------------+---------------------------------+---------------------------------+-------------------------------------------------------------------------+----------------------+------------------------</span>
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5
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<pre style="margin: 0;"> <span id="LC5" class="line" lang="plaintext"> artemis | 17.0.1 | 18.1.0 | Andreas Tille | Andreas Tille | 2019-02-08 11:19:24+00</span>
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<pre style="margin: 0;">-<span id="LC6" class="line" lang="plaintext"> atropos | 1.1.24 | 2.0.0-alpha.4 | Andreas Tille | Steffen Moeller | 2019-11-30 12:19:31+00</span>
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<pre style="margin: 0;"> <span id="LC6" class="line" lang="plaintext"> baitfisher | 1.2.7+git20180107.e92dbf2 | 1.2.7+git20190123.241d060 | Olivier Sallou | Andreas Tille | 2018-09-24 13:04:18+00</span>
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<pre style="margin: 0;"> <span id="LC7" class="line" lang="plaintext"> bbmap | 38.79 | 38.80 | Andreas Tille | Andreas Tille | 2020-02-27 11:08:04+00</span>
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<pre style="margin: 0;"> <span id="LC8" class="line" lang="plaintext"> biobambam2 | 2.0.160 | 2.0.162+ds | Andreas Tille | Andreas Tille | 2020-03-27 10:34:45+00</span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -37,19 +36,21 @@ Last-Update: Fri, 10 Apr 2020 01:42:04 +0000</td>
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<pre style="margin: 0;"> <span id="LC36" class="line" lang="plaintext"> libsis-base-java | 18.09~pre1+git20180827.fe4953e | 18.09~pre1+git20180928.45fbd31 | Andreas Tille,Olivier Sallou,Tim Booth | Andreas Tille | 2018-09-26 08:35:30+00</span>
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<pre style="margin: 0;"> <span id="LC37" class="line" lang="plaintext"> libthread-pool | 2.0.1 | 2.0.2 | Andreas Tille | Andreas Tille | 2019-11-19 21:21:23+00</span>
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<pre style="margin: 0;"> <span id="LC38" class="line" lang="plaintext"> metaphlan2 | 2.9.22 | 2.96.1 | Andreas Tille | Andreas Tille | 2019-11-08 07:19:11+00</span>
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<pre style="margin: 0;">+<span id="LC39" class="line" lang="plaintext"> minia | 3.2.1+git20191130.5b131b9 | 3.2.1+git20200409.489e374 | Andreas Tille,Olivier Sallou | Andreas Tille | 2019-12-16 09:04:06+00</span>
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<pre style="margin: 0;"> <span id="LC40" class="line" lang="plaintext"> ncbi-blast+ | 2.9.0 | 2.10.0 | Aaron M. Ucko,Andreas Tille,Olivier Sallou | Aaron M. Ucko | 2020-02-17 01:50:53+00</span>
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<pre style="margin: 0;"> <span id="LC41" class="line" lang="plaintext"> ncbi-entrez-direct | 12.0.20190816 | 13.5.20200326 | Aaron M. Ucko | Aaron M. Ucko | 2020-02-03 03:53:53+00</span>
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<pre style="margin: 0;"> <span id="LC42" class="line" lang="plaintext"> plink2 | 2.00~a3-200217 | 200328 | Dylan Aïssi | Dylan Aïssi | 2020-02-19 06:19:18+00</span>
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<pre style="margin: 0;">+<span id="LC43" class="line" lang="plaintext"> pybel | 0.14.5 | 0.14.6 | Steffen Moeller | Andreas Tille | 2020-03-29 18:48:55+00</span>
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<pre style="margin: 0;"> <span id="LC44" class="line" lang="plaintext"> pynn | 0.7.5 | 0.9.5 | Michael Hanke,Yaroslav Halchenko | Andreas Tille | 2020-04-03 16:34:56+00</span>
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<pre style="margin: 0;"> <span id="LC45" class="line" lang="plaintext"> python-avro | 1.9.1 | 1.9.2 | Afif Elghraoui | Andreas Tille | 2019-12-18 08:41:55+00</span>
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<pre style="margin: 0;"> <span id="LC46" class="line" lang="plaintext"> python-bids-validator | 1.2.4 | 1.5.1 | Yaroslav Halchenko | Yaroslav Halchenko | 2019-08-17 19:00:11+00</span>
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<pre style="margin: 0;"> <span id="LC47" class="line" lang="plaintext"> python-cgecore | 1.5.3 | 1.5.4 | Andreas Tille | Steffen Moeller | 2020-03-17 12:49:52+00</span>
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<pre style="margin: 0;"> <span id="LC48" class="line" lang="plaintext"> python-colormap | 1.0.2 | 1.0.3 | Andreas Tille | Andreas Tille | 2019-12-06 16:51:43+00</span>
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<pre style="margin: 0;">-<span id="LC48" class="line" lang="plaintext"> python-pbcore | 1.7.1+git20200313.41ba394 | 1.7.1+git20200<span class="idiff left right">326.ea0808a</span> | Andreas Tille | Steffen Moeller | 2020-03-21 19:39:08+00</span>
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<pre style="margin: 0;">+<span id="LC49" class="line" lang="plaintext"> python-pbcore | 1.7.1+git20200313.41ba394 | 1.7.1+git20200<span class="idiff left right">408.0579ac1</span> | Andreas Tille | Steffen Moeller | 2020-03-21 19:39:08+00</span>
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<pre style="margin: 0;"> <span id="LC50" class="line" lang="plaintext"> python-pymummer | 0.10.3 | 0.11.0 | Afif Elghraoui | Andreas Tille | 2019-01-07 09:06:07+00</span>
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<pre style="margin: 0;"> <span id="LC51" class="line" lang="plaintext"> python-schema-salad | 5.0.20200220195218 | 5.0.20200302192450 | Michael R. Crusoe | Michael R. Crusoe | 2020-02-27 19:19:53+00</span>
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<pre style="margin: 0;"> <span id="LC52" class="line" lang="plaintext"> python-xopen | 0.8.4 | 0.9.0 | Andreas Tille | Steffen Moeller | 2019-11-05 15:34:45+00</span>
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<pre style="margin: 0;">-<span id="LC52" class="line" lang="plaintext"> q2<span class="idiff left right">-types | 2019.10.0 | 2020.2.0 | Liubov Chuprikova | Liubov Chuprikova | 2019-12-23 20:39:42</span>+00</span>
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<pre style="margin: 0;">+<span id="LC53" class="line" lang="plaintext"> q2<span class="idiff left right">cli | 2019.10.0 | 2020.2.0 | Liubov Chuprikova | Liubov Chuprikova | 2019-12-16 10:20:08</span>+00</span>
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<pre style="margin: 0;"> <span id="LC54" class="line" lang="plaintext"> qiime | 2019.10.0 | 2020.2.0 | Andreas Tille,Liubov Chuprikova,Steffen Moeller | Liubov Chuprikova | 2019-12-16 09:51:27+00</span>
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<pre style="margin: 0;"> <span id="LC55" class="line" lang="plaintext"> resfinder-db | 0.0+git20191001.149209d | 0.0+git20200408.0322c0d | Andreas Tille | Andreas Tille | 2019-11-16 23:00:12+00</span>
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<pre style="margin: 0;"> <span id="LC56" class="line" lang="plaintext"> seaview | 4.7 | 5.0.2 | Andreas Tille,Charles Plessy | Andreas Tille | 2018-05-09 13:43:40+00</span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -64,7 +65,7 @@ Last-Update: Fri, 10 Apr 2020 01:42:04 +0000</td>
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<pre style="margin: 0;"> <span id="LC65" class="line" lang="plaintext"> t-coffee | 12.00.7fb08c2 | 13.41.0.28bdc39 | Andreas Tille,Steffen Moeller | Andreas Tille | 2019-02-15 07:57:10+00</span>
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<pre style="margin: 0;"> <span id="LC66" class="line" lang="plaintext"> unanimity | 3.3.0 | 4.2.0-1 | Afif Elghraoui,Andreas Tille | Adrian Bunk | 2019-02-06 07:34:42+00</span>
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<pre style="margin: 0;"> <span id="LC67" class="line" lang="plaintext"> xmedcon | 0.16.1 | 0.16.2 | Andreas Tille,Roland Marcus Rutschmann | Andreas Tille | 2019-01-25 18:23:59+00</span>
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<pre style="margin: 0;">+<span id="LC68" class="line" lang="plaintext">(6<span class="idiff left right">3</span> rows)</span>
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<pre style="margin: 0;"> <span id="LC71" class="line" lang="plaintext"> source | id | severity | title </span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -210,6 +211,7 @@ Last-Update: Fri, 10 Apr 2020 01:42:04 +0000</td>
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<pre style="margin: 0;"> <span id="LC211" class="line" lang="plaintext"> pynast | 948081 | serious | pynast build depends on and recommends the removed blast2 transitional package</span>
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<pre style="margin: 0;"> <span id="LC212" class="line" lang="plaintext"> python-biom-format | 820060 | normal | python-biom-format: broken on big-endian architectures</span>
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<pre style="margin: 0;"> <span id="LC213" class="line" lang="plaintext"> python-biom-format | 950929 | normal | python-biom-format: FTBFS with pandas 1.0: test failures</span>
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<pre style="margin: 0;">+<span id="LC214" class="line" lang="plaintext"> python-biopython | 956324 | serious | python-biopython: FTBFS on mipsel</span>
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<pre style="margin: 0;"> <span id="LC215" class="line" lang="plaintext"> python-cobra | 955656 | serious | python-cobra: FTBFS: E ModuleNotFoundError: No module named 'matplotlib'</span>
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<pre style="margin: 0;"> <span id="LC216" class="line" lang="plaintext"> python-cogent | 950474 | important | python-cogent FTBFS on armel and i386: test failures</span>
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<pre style="margin: 0;"> <span id="LC217" class="line" lang="plaintext"> python-intervaltree-bio | 920545 | serious | python-intervaltree breaks python-intervaltree-bio autopkgtest</span>
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<td class="line_content match " style="padding-left: 0.5em; padding-right: 0.5em; color: rgba(0,0,0,0.3);" bgcolor="#fafafa">@@ -262,5 +264,5 @@ Last-Update: Fri, 10 Apr 2020 01:42:04 +0000</td>
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<pre style="margin: 0;"> <span id="LC264" class="line" lang="plaintext"> xmedcon | 671828 | normal | xmedcon: Cannot open file with YBR photometric interpretation</span>
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<pre style="margin: 0;"> <span id="LC265" class="line" lang="plaintext"> xmedcon | 779707 | normal | Errors when reading dicomdir file: "No images found" / "Loading: DICM Error reading file"</span>
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<pre style="margin: 0;"> <span id="LC266" class="line" lang="plaintext"> xmedcon | 924017 | normal | desktop entry</span>
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<pre style="margin: 0;">-<span id="LC265" class="line" lang="plaintext">(19<span class="idiff left right">3</span> rows)</span>
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<pre style="margin: 0;">+<span id="LC267" class="line" lang="plaintext">(19<span class="idiff left right">4</span> rows)</span>
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<pre style="margin: 0;"> <span id="LC268" class="line" lang="plaintext"></span></pre>
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