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<h3>
Andreas Tille pushed to branch master
at <a href="https://salsa.debian.org/med-team/libssw">Debian Med / libssw</a>
</h3>
<h4>
Commits:
</h4>
<ul>
<li>
<strong><a href="https://salsa.debian.org/med-team/libssw/-/commit/1578dde374d37ff7f9a42c43e4e87347f82ac093">1578dde3</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-04-11T10:21:56+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">use Git mode since upstream stopped tagging releases
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/libssw/-/commit/373215c6a0be239c29f88a6fa8b958ce6ade73aa">373215c6</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-04-11T10:22:24+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">New upstream version 1.2.4+git20190312.cabdab1</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/libssw/-/commit/944837130f7aa31dc6c44b31c40e43e24b5ca0c7">94483713</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-04-11T10:22:49+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Update upstream source from tag 'upstream/1.2.4+git20190312.cabdab1'
Update to upstream version '1.2.4+git20190312.cabdab1'
with Debian dir 08f9b4de58b5cb07ca54049618e3d829a7c84c8b</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/libssw/-/commit/36cd56fd534039e012f10c5fa861fe35ba87e56a">36cd56fd</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-04-11T11:20:30+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Refresh patches
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/libssw/-/commit/4f4ef05d416e0862862776cdfd3847e2abe6182a">4f4ef05d</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-04-11T11:28:01+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Need to bump soversion since upstream has droped symbols
</pre>
</li>
<li>
<strong><a href="https://salsa.debian.org/med-team/libssw/-/commit/452eaaa4a5d781ab3fe742c4bfb0091377491dd6">452eaaa4</a></strong>
<div>
<span>by Andreas Tille</span>
<i>at 2020-04-11T11:40:58+02:00</i>
</div>
<pre class="commit-message" style="white-space: pre-wrap; margin: 0;">Spelling
</pre>
</li>
</ul>
<h4>30 changed files:</h4>
<ul>
<li class="file-stats">
<a href="#8ec9a00bfd09b3190ac6b22251dbb1aa95a0579d">
README.md
</a>
</li>
<li class="file-stats">
<a href="#9c96da0e9f91d7d8937b69b524702c106258f0d1">
debian/changelog
</a>
</li>
<li class="file-stats">
<a href="#58ef006ab62b83b4bec5d81fe5b32c3b4c2d1cc2">
debian/control
</a>
</li>
<li class="file-stats">
<a href="#c8d3ba4c647b58833f7ed73c593a3ba3ce78cc46">
<span class="deleted-file">
−
debian/libssw0.install.in
</span>
</a>
</li>
<li class="file-stats">
<a href="#f42e76fcc99ac21860d851ac910f5b907eeb6b3a">
<span class="new-file">
+
debian/libssw1.install.in
</span>
</a>
</li>
<li class="file-stats">
<a href="#7beec50e0c3ddf37f8d7b8014a7d7df23607654a">
debian/libssw0.symbols
→
debian/libssw1.symbols
</a>
</li>
<li class="file-stats">
<a href="#75de8a8fba7b2dc8f523b991ff6a523ed2bf920f">
debian/patches/build_all_libs.patch
</a>
</li>
<li class="file-stats">
<a href="#4d4a394ff4174f20019a8af4d8b6185efe92c21f">
debian/patches/hardening.patch
</a>
</li>
<li class="file-stats">
<a href="#52dc3e58185a550acb60dd82bc30b7c62d391abb">
debian/patches/rename_tool.patch
</a>
</li>
<li class="file-stats">
<a href="#5dc91bdd30262777c0556235b73413cd5865a144">
debian/patches/simde.patch
</a>
</li>
<li class="file-stats">
<a href="#8756c63497c8dc39f7773438edf53b220c773f67">
debian/rules
</a>
</li>
<li class="file-stats">
<a href="#68ef9f98c01c7eecd4c605cc26048a06f3304b79">
debian/watch
</a>
</li>
<li class="file-stats">
<a href="#7bbe96905d224e4ef9b6241676a0ee94932d3e19">
<span class="new-file">
+
demo/new.txt
</span>
</a>
</li>
<li class="file-stats">
<a href="#df0e4caa90dc2ac431eb6ba5305faf8a0e284b6e">
<span class="new-file">
+
demo/old.txt
</span>
</a>
</li>
<li class="file-stats">
<a href="#8ce6006ecd6e1949cbff71309c7743922450158f">
<span class="new-file">
+
demo/output.sam
</span>
</a>
</li>
<li class="file-stats">
<a href="#953dea787ebfc7ec6cfb16e329ac3fad36e24098">
<span class="new-file">
+
demo/pRead.fa
</span>
</a>
</li>
<li class="file-stats">
<a href="#ca1adc883fa7cae318a7544025e73368f380e7c4">
<span class="new-file">
+
demo/pRef.fa
</span>
</a>
</li>
<li class="file-stats">
<a href="#4b561868b430856029f5bc890049ad49d9648e8e">
<span class="new-file">
+
demo/query.fa
</span>
</a>
</li>
<li class="file-stats">
<a href="#5cf4a933540afe944c2154fc9fce269a512ab6f0">
<span class="new-file">
+
demo/query.fastq
</span>
</a>
</li>
<li class="file-stats">
<a href="#f94ac958cf984c8c2e2de95818a8cf5a73d0d0ff">
<span class="new-file">
+
demo/query1.fa
</span>
</a>
</li>
<li class="file-stats">
<a href="#ce18ac8d0dec073f5834ae743188f88690e89f99">
<span class="new-file">
+
demo/query2.fa
</span>
</a>
</li>
<li class="file-stats">
<a href="#8211e4b2b9cd3dd81013e035545a6a836b70fef3">
<span class="new-file">
+
demo/r1.fa
</span>
</a>
</li>
<li class="file-stats">
<a href="#4900f4a91e22398bcbab45dea413b71c6fe68d14">
<span class="new-file">
+
demo/r1_query.fq
</span>
</a>
</li>
<li class="file-stats">
<a href="#dba6d63d32e9766d55155fa24769c878d520efd7">
<span class="new-file">
+
demo/target.fa
</span>
</a>
</li>
<li class="file-stats">
<a href="#177d21c38101fb4e45d3dc053245b33595d131c9">
<span class="new-file">
+
demo/target.fastq
</span>
</a>
</li>
<li class="file-stats">
<a href="#4b2a86551ecb387ff54e455c48d2595a4bb3f83d">
<span class="new-file">
+
demo/target1.fa
</span>
</a>
</li>
<li class="file-stats">
<a href="#38e1c3f1ba1ea7a40337ac0d08f28678a3444a6b">
<span class="new-file">
+
demo/target2.fa
</span>
</a>
</li>
<li class="file-stats">
<a href="#93cbdd0973c9a7b59e5cef90a94300ab95fd66e5">
<span class="deleted-file">
−
src/.gitignore
</span>
</a>
</li>
<li class="file-stats">
<a href="#09a8e11089bd7b184c2ba7778565c1350e1c7e3a">
src/Makefile
</a>
</li>
<li class="file-stats">
<a href="#35fb435cf9b530ce411f4095badbb793a4e1cd78">
src/example.cpp
</a>
</li>
</ul>
<h5>The diff was not included because it is too large.</h5>
</div>
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